JAL-1620 version bump and release notes

[jalview.git] / src / jalview / ws / jws2 / dm / JabaOption.java

diff --git a/src/jalview/ws/jws2/dm/JabaOption.java b/src/jalview/ws/jws2/dm/JabaOption.java
index 27ecf85..5af8a20 100644 (file)
--- a/src/jalview/ws/jws2/dm/JabaOption.java
+++ b/src/jalview/ws/jws2/dm/JabaOption.java
@@ -1,8 +1,30 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
+ * Copyright (C) 2014 The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.ws.jws2.dm;
 
+import jalview.util.MessageManager;
 import jalview.ws.jws2.ParameterUtils;
 import jalview.ws.params.OptionI;
 
+import java.net.MalformedURLException;
 import java.net.URL;
 import java.util.List;
 
@@ -18,7 +40,7 @@ public class JabaOption implements jalview.ws.params.OptionI
   Option opt;
 
   @Override
-  public String getDefaultValue()
+  public String getValue()
   {
     return opt.getDefaultValue();
   }
@@ -32,7 +54,17 @@ public class JabaOption implements jalview.ws.params.OptionI
   @Override
   public URL getFurtherDetails()
   {
-    return opt.getFurtherDetails();
+    try
+    {
+      return new URL(opt.getBasicURL().toExternalForm() + "/"
+              + opt.getFurtherDetails());
+    } catch (NullPointerException q)
+    {
+    } catch (MalformedURLException q)
+    {
+
+    }
+    return null;
   }
 
   @Override
@@ -55,14 +87,15 @@ public class JabaOption implements jalview.ws.params.OptionI
   }
 
   @Override
-  public void setDefaultValue(String selectedItem)
+  public void setValue(String selectedItem)
   {
-    try {
+    try
+    {
       opt.setDefaultValue(selectedItem);
     } catch (Exception e)
     {
       e.printStackTrace();
-      throw new Error("Implementation error: cannot set Jaba Option to a value outside its allowed value range!");
+      throw new Error(MessageManager.getString("error.implementation_error_cannot_set_jaba_option"));
     }
   }
 
@@ -73,12 +106,14 @@ public class JabaOption implements jalview.ws.params.OptionI
   }
 
   /**
-   * get the underlying Jaba option or parameter object. Note - use copy first if you want to modify the value of the option.
+   * get the underlying Jaba option or parameter object. Note - use copy first
+   * if you want to modify the value of the option.
+   * 
    * @return
    */
   public Option getOption()
   {
     return opt;
   }
-  
+
 }