JAL-4281 store/restore ID width and manual adjustment flag in Jalview projects

[jalview.git] / src / jalview / xml / binding / jalview / Mapping.java

diff --git a/src/jalview/xml/binding/jalview/Mapping.java b/src/jalview/xml/binding/jalview/Mapping.java
index 69bf01d..3b0acb1 100644 (file)
--- a/src/jalview/xml/binding/jalview/Mapping.java
+++ b/src/jalview/xml/binding/jalview/Mapping.java
@@ -1,10 +1,11 @@
 //
-// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802 
-// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a> 
+// This file was generated by the Eclipse Implementation of JAXB, v2.3.3 
+// See https://eclipse-ee4j.github.io/jaxb-ri 
 // Any modifications to this file will be lost upon recompilation of the source schema. 
-// Generated on: 2023.05.13 at 06:58:41 PM BST 
+// Generated on: 2023.09.08 at 03:55:49 PM BST 
 //
 
+
 package jalview.xml.binding.jalview;
 
 import javax.xml.bind.annotation.XmlAccessType;
@@ -14,124 +15,127 @@ import javax.xml.bind.annotation.XmlElement;
 import javax.xml.bind.annotation.XmlRootElement;
 import javax.xml.bind.annotation.XmlType;
 
+
 /**
  * 
- * Represent the jalview.datamodel.Mapping object - it also provides a way of
- * storing sequences that are mapped 'to' without adding them to the sequence
- * set (which will mean they are then added to the alignment too).
- * 
+ *                                     Represent the jalview.datamodel.Mapping object - it also provides
+ *                                     a way of storing sequences that are mapped 'to' without adding them
+ *                                     to the sequence set (which will mean they are then added to the alignment too).
+ *                             
  * 
- * <p>
- * Java class for anonymous complex type.
+ * &lt;p&gt;Java class for anonymous complex type.
  * 
- * <p>
- * The following schema fragment specifies the expected content contained within
- * this class.
+ * &lt;p&gt;The following schema fragment specifies the expected content contained within this class.
  * 
- * <pre>
- * &lt;complexType>
- *   &lt;complexContent>
- *     &lt;extension base="{www.vamsas.ac.uk/jalview/version2}mapListType">
- *       &lt;sequence>
- *         &lt;choice minOccurs="0">
- *           &lt;element ref="{www.vamsas.ac.uk/jalview/version2}Sequence"/>
- *           &lt;element name="dseqFor">
- *             &lt;simpleType>
- *               &lt;restriction base="{http://www.w3.org/2001/XMLSchema}string">
- *               &lt;/restriction>
- *             &lt;/simpleType>
- *           &lt;/element>
- *         &lt;/choice>
- *       &lt;/sequence>
- *       &lt;attribute name="mappingType" type="{http://www.w3.org/2001/XMLSchema}string" />
- *     &lt;/extension>
- *   &lt;/complexContent>
- * &lt;/complexType>
- * </pre>
+ * &lt;pre&gt;
+ * &amp;lt;complexType&amp;gt;
+ *   &amp;lt;complexContent&amp;gt;
+ *     &amp;lt;extension base="{www.vamsas.ac.uk/jalview/version2}mapListType"&amp;gt;
+ *       &amp;lt;sequence&amp;gt;
+ *         &amp;lt;choice minOccurs="0"&amp;gt;
+ *           &amp;lt;element ref="{www.vamsas.ac.uk/jalview/version2}Sequence"/&amp;gt;
+ *           &amp;lt;element name="dseqFor"&amp;gt;
+ *             &amp;lt;simpleType&amp;gt;
+ *               &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}string"&amp;gt;
+ *               &amp;lt;/restriction&amp;gt;
+ *             &amp;lt;/simpleType&amp;gt;
+ *           &amp;lt;/element&amp;gt;
+ *         &amp;lt;/choice&amp;gt;
+ *       &amp;lt;/sequence&amp;gt;
+ *       &amp;lt;attribute name="mappingType" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
+ *     &amp;lt;/extension&amp;gt;
+ *   &amp;lt;/complexContent&amp;gt;
+ * &amp;lt;/complexType&amp;gt;
+ * &lt;/pre&gt;
  * 
  * 
  */
 @XmlAccessorType(XmlAccessType.FIELD)
-@XmlType(name = "", propOrder = { "sequence", "dseqFor" })
+@XmlType(name = "", propOrder = {
+    "sequence",
+    "dseqFor"
+})
 @XmlRootElement(name = "Mapping")
-public class Mapping extends MapListType
+public class Mapping
+    extends MapListType
 {
 
-  @XmlElement(name = "Sequence")
-  protected Sequence sequence;
-
-  protected String dseqFor;
-
-  @XmlAttribute(name = "mappingType")
-  protected String mappingType;
+    @XmlElement(name = "Sequence")
+    protected Sequence sequence;
+    protected String dseqFor;
+    @XmlAttribute(name = "mappingType")
+    protected String mappingType;
 
-  /**
-   * Gets the value of the sequence property.
-   * 
-   * @return possible object is {@link Sequence }
-   * 
-   */
-  public Sequence getSequence()
-  {
-    return sequence;
-  }
+    /**
+     * Gets the value of the sequence property.
+     * 
+     * @return
+     *     possible object is
+     *     {@link Sequence }
+     *     
+     */
+    public Sequence getSequence() {
+        return sequence;
+    }
 
-  /**
-   * Sets the value of the sequence property.
-   * 
-   * @param value
-   *          allowed object is {@link Sequence }
-   * 
-   */
-  public void setSequence(Sequence value)
-  {
-    this.sequence = value;
-  }
+    /**
+     * Sets the value of the sequence property.
+     * 
+     * @param value
+     *     allowed object is
+     *     {@link Sequence }
+     *     
+     */
+    public void setSequence(Sequence value) {
+        this.sequence = value;
+    }
 
-  /**
-   * Gets the value of the dseqFor property.
-   * 
-   * @return possible object is {@link String }
-   * 
-   */
-  public String getDseqFor()
-  {
-    return dseqFor;
-  }
+    /**
+     * Gets the value of the dseqFor property.
+     * 
+     * @return
+     *     possible object is
+     *     {@link String }
+     *     
+     */
+    public String getDseqFor() {
+        return dseqFor;
+    }
 
-  /**
-   * Sets the value of the dseqFor property.
-   * 
-   * @param value
-   *          allowed object is {@link String }
-   * 
-   */
-  public void setDseqFor(String value)
-  {
-    this.dseqFor = value;
-  }
+    /**
+     * Sets the value of the dseqFor property.
+     * 
+     * @param value
+     *     allowed object is
+     *     {@link String }
+     *     
+     */
+    public void setDseqFor(String value) {
+        this.dseqFor = value;
+    }
 
-  /**
-   * Gets the value of the mappingType property.
-   * 
-   * @return possible object is {@link String }
-   * 
-   */
-  public String getMappingType()
-  {
-    return mappingType;
-  }
+    /**
+     * Gets the value of the mappingType property.
+     * 
+     * @return
+     *     possible object is
+     *     {@link String }
+     *     
+     */
+    public String getMappingType() {
+        return mappingType;
+    }
 
-  /**
-   * Sets the value of the mappingType property.
-   * 
-   * @param value
-   *          allowed object is {@link String }
-   * 
-   */
-  public void setMappingType(String value)
-  {
-    this.mappingType = value;
-  }
+    /**
+     * Sets the value of the mappingType property.
+     * 
+     * @param value
+     *     allowed object is
+     *     {@link String }
+     *     
+     */
+    public void setMappingType(String value) {
+        this.mappingType = value;
+    }
 
 }