JAL-4134 store/restore Newick tree for PAE annotation row

[jalview.git] / src / jalview / xml / binding / jalview / ObjectFactory.java

diff --git a/src/jalview/xml/binding/jalview/ObjectFactory.java b/src/jalview/xml/binding/jalview/ObjectFactory.java
index 2c8d513..f034a2a 100644 (file)
--- a/src/jalview/xml/binding/jalview/ObjectFactory.java
+++ b/src/jalview/xml/binding/jalview/ObjectFactory.java
@@ -2,7 +2,7 @@
 // This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802 
 // See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a> 
 // Any modifications to this file will be lost upon recompilation of the source schema. 
-// Generated on: 2018.09.18 at 04:36:20 PM BST 
+// Generated on: 2023.03.17 at 05:31:44 PM GMT 
 //
 
 
@@ -31,6 +31,7 @@ import javax.xml.namespace.QName;
 @XmlRegistry
 public class ObjectFactory {
 
+    private final static QName _WebServiceParameterSet_QNAME = new QName("www.jalview.org/xml/wsparamset", "WebServiceParameterSet");
     private final static QName _JalviewModel_QNAME = new QName("www.jalview.org", "JalviewModel");
     private final static QName _JalviewUserColours_QNAME = new QName("www.jalview.org/colours", "JalviewUserColours");
 
@@ -130,6 +131,14 @@ public class ObjectFactory {
     }
 
     /**
+     * Create an instance of {@link JalviewModel.PcaViewer }
+     * 
+     */
+    public JalviewModel.PcaViewer createJalviewModelPcaViewer() {
+        return new JalviewModel.PcaViewer();
+    }
+
+    /**
      * Create an instance of {@link JalviewModel.Viewport }
      * 
      */
@@ -162,6 +171,14 @@ public class ObjectFactory {
     }
 
     /**
+     * Create an instance of {@link DoubleMatrix }
+     * 
+     */
+    public DoubleMatrix createDoubleMatrix() {
+        return new DoubleMatrix();
+    }
+
+    /**
      * Create an instance of {@link AnnotationColourScheme }
      * 
      */
@@ -170,6 +187,22 @@ public class ObjectFactory {
     }
 
     /**
+     * Create an instance of {@link PcaDataType }
+     * 
+     */
+    public PcaDataType createPcaDataType() {
+        return new PcaDataType();
+    }
+
+    /**
+     * Create an instance of {@link DoubleVector }
+     * 
+     */
+    public DoubleVector createDoubleVector() {
+        return new DoubleVector();
+    }
+
+    /**
      * Create an instance of {@link AlcodonFrame.Alcodon }
      * 
      */
@@ -242,11 +275,19 @@ public class ObjectFactory {
     }
 
     /**
-     * Create an instance of {@link Annotation.Property }
+     * Create an instance of {@link MatrixType }
+     * 
+     */
+    public MatrixType createMatrixType() {
+        return new MatrixType();
+    }
+
+    /**
+     * Create an instance of {@link jalview.xml.binding.jalview.Property }
      * 
      */
-    public Annotation.Property createAnnotationProperty() {
-        return new Annotation.Property();
+    public jalview.xml.binding.jalview.Property createProperty() {
+        return new jalview.xml.binding.jalview.Property();
     }
 
     /**
@@ -362,6 +403,38 @@ public class ObjectFactory {
     }
 
     /**
+     * Create an instance of {@link JalviewModel.PcaViewer.SequencePoint }
+     * 
+     */
+    public JalviewModel.PcaViewer.SequencePoint createJalviewModelPcaViewerSequencePoint() {
+        return new JalviewModel.PcaViewer.SequencePoint();
+    }
+
+    /**
+     * Create an instance of {@link JalviewModel.PcaViewer.Axis }
+     * 
+     */
+    public JalviewModel.PcaViewer.Axis createJalviewModelPcaViewerAxis() {
+        return new JalviewModel.PcaViewer.Axis();
+    }
+
+    /**
+     * Create an instance of {@link JalviewModel.PcaViewer.SeqPointMin }
+     * 
+     */
+    public JalviewModel.PcaViewer.SeqPointMin createJalviewModelPcaViewerSeqPointMin() {
+        return new JalviewModel.PcaViewer.SeqPointMin();
+    }
+
+    /**
+     * Create an instance of {@link JalviewModel.PcaViewer.SeqPointMax }
+     * 
+     */
+    public JalviewModel.PcaViewer.SeqPointMax createJalviewModelPcaViewerSeqPointMax() {
+        return new JalviewModel.PcaViewer.SeqPointMax();
+    }
+
+    /**
      * Create an instance of {@link JalviewModel.Viewport.HiddenColumns }
      * 
      */
@@ -378,6 +451,14 @@ public class ObjectFactory {
     }
 
     /**
+     * Create an instance of {@link JalviewModel.Viewport.Overview }
+     * 
+     */
+    public JalviewModel.Viewport.Overview createJalviewModelViewportOverview() {
+        return new JalviewModel.Viewport.Overview();
+    }
+
+    /**
      * Create an instance of {@link JalviewModel.JSeq.RnaViewer.SecondaryStructure }
      * 
      */
@@ -394,6 +475,15 @@ public class ObjectFactory {
     }
 
     /**
+     * Create an instance of {@link JAXBElement }{@code <}{@link WebServiceParameterSet }{@code >}}
+     * 
+     */
+    @XmlElementDecl(namespace = "www.jalview.org/xml/wsparamset", name = "WebServiceParameterSet")
+    public JAXBElement<WebServiceParameterSet> createWebServiceParameterSet(WebServiceParameterSet value) {
+        return new JAXBElement<WebServiceParameterSet>(_WebServiceParameterSet_QNAME, WebServiceParameterSet.class, null, value);
+    }
+
+    /**
      * Create an instance of {@link JAXBElement }{@code <}{@link JalviewModel }{@code >}}
      * 
      */