JAL-1713 update from Jalview 2.11.3 develop

[jalview.git] / src / jalview / xml / binding / uniprot / IsoformType.java

diff --git a/src/jalview/xml/binding/uniprot/IsoformType.java b/src/jalview/xml/binding/uniprot/IsoformType.java
index 8468a49..33710ef 100644 (file)
--- a/src/jalview/xml/binding/uniprot/IsoformType.java
+++ b/src/jalview/xml/binding/uniprot/IsoformType.java
@@ -1,8 +1,8 @@
 //
-// This file was generated by the Eclipse Implementation of JAXB, v2.3.3 
-// See https://eclipse-ee4j.github.io/jaxb-ri 
+// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802 
+// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a> 
 // Any modifications to this file will be lost upon recompilation of the source schema. 
-// Generated on: 2022.02.07 at 04:44:21 PM GMT 
+// Generated on: 2023.01.31 at 04:07:10 PM GMT 
 //
 
 
@@ -21,50 +21,50 @@ import javax.xml.bind.annotation.XmlValue;
 /**
  * Describes isoforms in 'alternative products' annotations.
  * 
- * &lt;p&gt;Java class for isoformType complex type.
+ * <p>Java class for isoformType complex type.
  * 
- * &lt;p&gt;The following schema fragment specifies the expected content contained within this class.
+ * <p>The following schema fragment specifies the expected content contained within this class.
  * 
- * &lt;pre&gt;
- * &amp;lt;complexType name="isoformType"&amp;gt;
- *   &amp;lt;complexContent&amp;gt;
- *     &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&amp;gt;
- *       &amp;lt;sequence&amp;gt;
- *         &amp;lt;element name="id" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="unbounded"/&amp;gt;
- *         &amp;lt;element name="name" maxOccurs="unbounded"&amp;gt;
- *           &amp;lt;complexType&amp;gt;
- *             &amp;lt;simpleContent&amp;gt;
- *               &amp;lt;extension base="&amp;lt;http://www.w3.org/2001/XMLSchema&amp;gt;string"&amp;gt;
- *                 &amp;lt;attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" /&amp;gt;
- *               &amp;lt;/extension&amp;gt;
- *             &amp;lt;/simpleContent&amp;gt;
- *           &amp;lt;/complexType&amp;gt;
- *         &amp;lt;/element&amp;gt;
- *         &amp;lt;element name="sequence"&amp;gt;
- *           &amp;lt;complexType&amp;gt;
- *             &amp;lt;complexContent&amp;gt;
- *               &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&amp;gt;
- *                 &amp;lt;attribute name="type" use="required"&amp;gt;
- *                   &amp;lt;simpleType&amp;gt;
- *                     &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}string"&amp;gt;
- *                       &amp;lt;enumeration value="not described"/&amp;gt;
- *                       &amp;lt;enumeration value="described"/&amp;gt;
- *                       &amp;lt;enumeration value="displayed"/&amp;gt;
- *                       &amp;lt;enumeration value="external"/&amp;gt;
- *                     &amp;lt;/restriction&amp;gt;
- *                   &amp;lt;/simpleType&amp;gt;
- *                 &amp;lt;/attribute&amp;gt;
- *                 &amp;lt;attribute name="ref" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
- *               &amp;lt;/restriction&amp;gt;
- *             &amp;lt;/complexContent&amp;gt;
- *           &amp;lt;/complexType&amp;gt;
- *         &amp;lt;/element&amp;gt;
- *         &amp;lt;element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/&amp;gt;
- *       &amp;lt;/sequence&amp;gt;
- *     &amp;lt;/restriction&amp;gt;
- *   &amp;lt;/complexContent&amp;gt;
- * &amp;lt;/complexType&amp;gt;
- * &lt;/pre&gt;
+ * <pre>
+ * &lt;complexType name="isoformType">
+ *   &lt;complexContent>
+ *     &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ *       &lt;sequence>
+ *         &lt;element name="id" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="unbounded"/>
+ *         &lt;element name="name" maxOccurs="unbounded">
+ *           &lt;complexType>
+ *             &lt;simpleContent>
+ *               &lt;extension base="&lt;http://www.w3.org/2001/XMLSchema>string">
+ *                 &lt;attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
+ *               &lt;/extension>
+ *             &lt;/simpleContent>
+ *           &lt;/complexType>
+ *         &lt;/element>
+ *         &lt;element name="sequence">
+ *           &lt;complexType>
+ *             &lt;complexContent>
+ *               &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ *                 &lt;attribute name="type" use="required">
+ *                   &lt;simpleType>
+ *                     &lt;restriction base="{http://www.w3.org/2001/XMLSchema}string">
+ *                       &lt;enumeration value="not described"/>
+ *                       &lt;enumeration value="described"/>
+ *                       &lt;enumeration value="displayed"/>
+ *                       &lt;enumeration value="external"/>
+ *                     &lt;/restriction>
+ *                   &lt;/simpleType>
+ *                 &lt;/attribute>
+ *                 &lt;attribute name="ref" type="{http://www.w3.org/2001/XMLSchema}string" />
+ *               &lt;/restriction>
+ *             &lt;/complexContent>
+ *           &lt;/complexType>
+ *         &lt;/element>
+ *         &lt;element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
+ *       &lt;/sequence>
+ *     &lt;/restriction>
+ *   &lt;/complexContent>
+ * &lt;/complexType>
+ * </pre>
  * 
  * 
  */
@@ -88,20 +88,20 @@ public class IsoformType {
     /**
      * Gets the value of the id property.
      * 
-     * &lt;p&gt;
+     * <p>
      * This accessor method returns a reference to the live list,
      * not a snapshot. Therefore any modification you make to the
      * returned list will be present inside the JAXB object.
-     * This is why there is not a &lt;CODE&gt;set&lt;/CODE&gt; method for the id property.
+     * This is why there is not a <CODE>set</CODE> method for the id property.
      * 
-     * &lt;p&gt;
+     * <p>
      * For example, to add a new item, do as follows:
-     * &lt;pre&gt;
+     * <pre>
      *    getId().add(newItem);
-     * &lt;/pre&gt;
+     * </pre>
      * 
      * 
-     * &lt;p&gt;
+     * <p>
      * Objects of the following type(s) are allowed in the list
      * {@link String }
      * 
@@ -117,20 +117,20 @@ public class IsoformType {
     /**
      * Gets the value of the name property.
      * 
-     * &lt;p&gt;
+     * <p>
      * This accessor method returns a reference to the live list,
      * not a snapshot. Therefore any modification you make to the
      * returned list will be present inside the JAXB object.
-     * This is why there is not a &lt;CODE&gt;set&lt;/CODE&gt; method for the name property.
+     * This is why there is not a <CODE>set</CODE> method for the name property.
      * 
-     * &lt;p&gt;
+     * <p>
      * For example, to add a new item, do as follows:
-     * &lt;pre&gt;
+     * <pre>
      *    getName().add(newItem);
-     * &lt;/pre&gt;
+     * </pre>
      * 
      * 
-     * &lt;p&gt;
+     * <p>
      * Objects of the following type(s) are allowed in the list
      * {@link IsoformType.Name }
      * 
@@ -170,20 +170,20 @@ public class IsoformType {
     /**
      * Gets the value of the text property.
      * 
-     * &lt;p&gt;
+     * <p>
      * This accessor method returns a reference to the live list,
      * not a snapshot. Therefore any modification you make to the
      * returned list will be present inside the JAXB object.
-     * This is why there is not a &lt;CODE&gt;set&lt;/CODE&gt; method for the text property.
+     * This is why there is not a <CODE>set</CODE> method for the text property.
      * 
-     * &lt;p&gt;
+     * <p>
      * For example, to add a new item, do as follows:
-     * &lt;pre&gt;
+     * <pre>
      *    getText().add(newItem);
-     * &lt;/pre&gt;
+     * </pre>
      * 
      * 
-     * &lt;p&gt;
+     * <p>
      * Objects of the following type(s) are allowed in the list
      * {@link EvidencedStringType }
      * 
@@ -198,19 +198,19 @@ public class IsoformType {
 
 
     /**
-     * &lt;p&gt;Java class for anonymous complex type.
+     * <p>Java class for anonymous complex type.
      * 
-     * &lt;p&gt;The following schema fragment specifies the expected content contained within this class.
+     * <p>The following schema fragment specifies the expected content contained within this class.
      * 
-     * &lt;pre&gt;
-     * &amp;lt;complexType&amp;gt;
-     *   &amp;lt;simpleContent&amp;gt;
-     *     &amp;lt;extension base="&amp;lt;http://www.w3.org/2001/XMLSchema&amp;gt;string"&amp;gt;
-     *       &amp;lt;attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" /&amp;gt;
-     *     &amp;lt;/extension&amp;gt;
-     *   &amp;lt;/simpleContent&amp;gt;
-     * &amp;lt;/complexType&amp;gt;
-     * &lt;/pre&gt;
+     * <pre>
+     * &lt;complexType>
+     *   &lt;simpleContent>
+     *     &lt;extension base="&lt;http://www.w3.org/2001/XMLSchema>string">
+     *       &lt;attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
+     *     &lt;/extension>
+     *   &lt;/simpleContent>
+     * &lt;/complexType>
+     * </pre>
      * 
      * 
      */
@@ -252,20 +252,20 @@ public class IsoformType {
         /**
          * Gets the value of the evidence property.
          * 
-         * &lt;p&gt;
+         * <p>
          * This accessor method returns a reference to the live list,
          * not a snapshot. Therefore any modification you make to the
          * returned list will be present inside the JAXB object.
-         * This is why there is not a &lt;CODE&gt;set&lt;/CODE&gt; method for the evidence property.
+         * This is why there is not a <CODE>set</CODE> method for the evidence property.
          * 
-         * &lt;p&gt;
+         * <p>
          * For example, to add a new item, do as follows:
-         * &lt;pre&gt;
+         * <pre>
          *    getEvidence().add(newItem);
-         * &lt;/pre&gt;
+         * </pre>
          * 
          * 
-         * &lt;p&gt;
+         * <p>
          * Objects of the following type(s) are allowed in the list
          * {@link Integer }
          * 
@@ -282,29 +282,29 @@ public class IsoformType {
 
 
     /**
-     * &lt;p&gt;Java class for anonymous complex type.
+     * <p>Java class for anonymous complex type.
      * 
-     * &lt;p&gt;The following schema fragment specifies the expected content contained within this class.
+     * <p>The following schema fragment specifies the expected content contained within this class.
      * 
-     * &lt;pre&gt;
-     * &amp;lt;complexType&amp;gt;
-     *   &amp;lt;complexContent&amp;gt;
-     *     &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&amp;gt;
-     *       &amp;lt;attribute name="type" use="required"&amp;gt;
-     *         &amp;lt;simpleType&amp;gt;
-     *           &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}string"&amp;gt;
-     *             &amp;lt;enumeration value="not described"/&amp;gt;
-     *             &amp;lt;enumeration value="described"/&amp;gt;
-     *             &amp;lt;enumeration value="displayed"/&amp;gt;
-     *             &amp;lt;enumeration value="external"/&amp;gt;
-     *           &amp;lt;/restriction&amp;gt;
-     *         &amp;lt;/simpleType&amp;gt;
-     *       &amp;lt;/attribute&amp;gt;
-     *       &amp;lt;attribute name="ref" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
-     *     &amp;lt;/restriction&amp;gt;
-     *   &amp;lt;/complexContent&amp;gt;
-     * &amp;lt;/complexType&amp;gt;
-     * &lt;/pre&gt;
+     * <pre>
+     * &lt;complexType>
+     *   &lt;complexContent>
+     *     &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       &lt;attribute name="type" use="required">
+     *         &lt;simpleType>
+     *           &lt;restriction base="{http://www.w3.org/2001/XMLSchema}string">
+     *             &lt;enumeration value="not described"/>
+     *             &lt;enumeration value="described"/>
+     *             &lt;enumeration value="displayed"/>
+     *             &lt;enumeration value="external"/>
+     *           &lt;/restriction>
+     *         &lt;/simpleType>
+     *       &lt;/attribute>
+     *       &lt;attribute name="ref" type="{http://www.w3.org/2001/XMLSchema}string" />
+     *     &lt;/restriction>
+     *   &lt;/complexContent>
+     * &lt;/complexType>
+     * </pre>
      * 
      * 
      */