JAL-2349 store/restore mappable contact matrix in project and fix up interactive...

[jalview.git] / src / jalview / xml / binding / uniprot / PositionType.java

diff --git a/src/jalview/xml/binding/uniprot/PositionType.java b/src/jalview/xml/binding/uniprot/PositionType.java
index c3713fa..f867ab3 100644 (file)
--- a/src/jalview/xml/binding/uniprot/PositionType.java
+++ b/src/jalview/xml/binding/uniprot/PositionType.java
@@ -2,9 +2,10 @@
 // This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802 
 // See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a> 
 // Any modifications to this file will be lost upon recompilation of the source schema. 
-// Generated on: 2019.04.05 at 08:01:44 AM BST 
+// Generated on: 2023.05.13 at 06:58:42 PM BST 
 //
 
+
 package jalview.xml.binding.uniprot;
 
 import java.math.BigInteger;
@@ -16,13 +17,11 @@ import javax.xml.bind.annotation.XmlAttribute;
 import javax.xml.bind.annotation.XmlSchemaType;
 import javax.xml.bind.annotation.XmlType;
 
+
 /**
- * <p>
- * Java class for positionType complex type.
+ * <p>Java class for positionType complex type.
  * 
- * <p>
- * The following schema fragment specifies the expected content contained within
- * this class.
+ * <p>The following schema fragment specifies the expected content contained within this class.
  * 
  * <pre>
  * &lt;complexType name="positionType">
@@ -50,101 +49,95 @@ import javax.xml.bind.annotation.XmlType;
  */
 @XmlAccessorType(XmlAccessType.FIELD)
 @XmlType(name = "positionType")
-public class PositionType
-{
-
-  @XmlAttribute(name = "position")
-  @XmlSchemaType(name = "unsignedLong")
-  protected BigInteger position;
-
-  @XmlAttribute(name = "status")
-  protected String status;
+public class PositionType {
 
-  @XmlAttribute(name = "evidence")
-  protected List<Integer> evidence;
+    @XmlAttribute(name = "position")
+    @XmlSchemaType(name = "unsignedLong")
+    protected BigInteger position;
+    @XmlAttribute(name = "status")
+    protected String status;
+    @XmlAttribute(name = "evidence")
+    protected List<Integer> evidence;
 
-  /**
-   * Gets the value of the position property.
-   * 
-   * @return possible object is {@link BigInteger }
-   * 
-   */
-  public BigInteger getPosition()
-  {
-    return position;
-  }
-
-  /**
-   * Sets the value of the position property.
-   * 
-   * @param value
-   *          allowed object is {@link BigInteger }
-   * 
-   */
-  public void setPosition(BigInteger value)
-  {
-    this.position = value;
-  }
+    /**
+     * Gets the value of the position property.
+     * 
+     * @return
+     *     possible object is
+     *     {@link BigInteger }
+     *     
+     */
+    public BigInteger getPosition() {
+        return position;
+    }
 
-  /**
-   * Gets the value of the status property.
-   * 
-   * @return possible object is {@link String }
-   * 
-   */
-  public String getStatus()
-  {
-    if (status == null)
-    {
-      return "certain";
+    /**
+     * Sets the value of the position property.
+     * 
+     * @param value
+     *     allowed object is
+     *     {@link BigInteger }
+     *     
+     */
+    public void setPosition(BigInteger value) {
+        this.position = value;
     }
-    else
-    {
-      return status;
+
+    /**
+     * Gets the value of the status property.
+     * 
+     * @return
+     *     possible object is
+     *     {@link String }
+     *     
+     */
+    public String getStatus() {
+        if (status == null) {
+            return "certain";
+        } else {
+            return status;
+        }
     }
-  }
 
-  /**
-   * Sets the value of the status property.
-   * 
-   * @param value
-   *          allowed object is {@link String }
-   * 
-   */
-  public void setStatus(String value)
-  {
-    this.status = value;
-  }
+    /**
+     * Sets the value of the status property.
+     * 
+     * @param value
+     *     allowed object is
+     *     {@link String }
+     *     
+     */
+    public void setStatus(String value) {
+        this.status = value;
+    }
 
-  /**
-   * Gets the value of the evidence property.
-   * 
-   * <p>
-   * This accessor method returns a reference to the live list, not a snapshot.
-   * Therefore any modification you make to the returned list will be present
-   * inside the JAXB object. This is why there is not a <CODE>set</CODE> method
-   * for the evidence property.
-   * 
-   * <p>
-   * For example, to add a new item, do as follows:
-   * 
-   * <pre>
-   * getEvidence().add(newItem);
-   * </pre>
-   * 
-   * 
-   * <p>
-   * Objects of the following type(s) are allowed in the list {@link Integer }
-   * 
-   * 
-   */
-  public List<Integer> getEvidence()
-  {
-    if (evidence == null)
-    {
-      evidence = new ArrayList<Integer>();
+    /**
+     * Gets the value of the evidence property.
+     * 
+     * <p>
+     * This accessor method returns a reference to the live list,
+     * not a snapshot. Therefore any modification you make to the
+     * returned list will be present inside the JAXB object.
+     * This is why there is not a <CODE>set</CODE> method for the evidence property.
+     * 
+     * <p>
+     * For example, to add a new item, do as follows:
+     * <pre>
+     *    getEvidence().add(newItem);
+     * </pre>
+     * 
+     * 
+     * <p>
+     * Objects of the following type(s) are allowed in the list
+     * {@link Integer }
+     * 
+     * 
+     */
+    public List<Integer> getEvidence() {
+        if (evidence == null) {
+            evidence = new ArrayList<Integer>();
+        }
+        return this.evidence;
     }
-    return this.evidence;
-  }
 
 }