Merge branch 'features/pca_jaxb_datasetrefs_JAL-3171_JAL-3063_JAL-1767' into develop
[jalview.git] / src / jalview / xml / binding / uniprot / ProteinType.java
diff --git a/src/jalview/xml/binding/uniprot/ProteinType.java b/src/jalview/xml/binding/uniprot/ProteinType.java
new file mode 100644 (file)
index 0000000..dd5a8be
--- /dev/null
@@ -0,0 +1,1109 @@
+//
+// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802 
+// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a> 
+// Any modifications to this file will be lost upon recompilation of the source schema. 
+// Generated on: 2018.09.13 at 10:18:53 AM BST 
+//
+
+
+package jalview.xml.binding.uniprot;
+
+import java.util.ArrayList;
+import java.util.List;
+import javax.xml.bind.annotation.XmlAccessType;
+import javax.xml.bind.annotation.XmlAccessorType;
+import javax.xml.bind.annotation.XmlElement;
+import javax.xml.bind.annotation.XmlType;
+
+
+/**
+ * Describes the names for the protein and parts thereof.
+ *             Equivalent to the flat file DE-line.
+ * 
+ * <p>Java class for proteinType complex type.
+ * 
+ * <p>The following schema fragment specifies the expected content contained within this class.
+ * 
+ * <pre>
+ * &lt;complexType name="proteinType">
+ *   &lt;complexContent>
+ *     &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ *       &lt;sequence>
+ *         &lt;group ref="{http://uniprot.org/uniprot}proteinNameGroup"/>
+ *         &lt;element name="domain" maxOccurs="unbounded" minOccurs="0">
+ *           &lt;complexType>
+ *             &lt;complexContent>
+ *               &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ *                 &lt;group ref="{http://uniprot.org/uniprot}proteinNameGroup"/>
+ *               &lt;/restriction>
+ *             &lt;/complexContent>
+ *           &lt;/complexType>
+ *         &lt;/element>
+ *         &lt;element name="component" maxOccurs="unbounded" minOccurs="0">
+ *           &lt;complexType>
+ *             &lt;complexContent>
+ *               &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ *                 &lt;group ref="{http://uniprot.org/uniprot}proteinNameGroup"/>
+ *               &lt;/restriction>
+ *             &lt;/complexContent>
+ *           &lt;/complexType>
+ *         &lt;/element>
+ *       &lt;/sequence>
+ *     &lt;/restriction>
+ *   &lt;/complexContent>
+ * &lt;/complexType>
+ * </pre>
+ * 
+ * 
+ */
+@XmlAccessorType(XmlAccessType.FIELD)
+@XmlType(name = "proteinType", propOrder = {
+    "recommendedName",
+    "alternativeName",
+    "submittedName",
+    "allergenName",
+    "biotechName",
+    "cdAntigenName",
+    "innName",
+    "domain",
+    "component"
+})
+public class ProteinType {
+
+    protected ProteinType.RecommendedName recommendedName;
+    protected List<ProteinType.AlternativeName> alternativeName;
+    protected List<ProteinType.SubmittedName> submittedName;
+    protected EvidencedStringType allergenName;
+    protected EvidencedStringType biotechName;
+    protected List<EvidencedStringType> cdAntigenName;
+    protected List<EvidencedStringType> innName;
+    protected List<ProteinType.Domain> domain;
+    protected List<ProteinType.Component> component;
+
+    /**
+     * Gets the value of the recommendedName property.
+     * 
+     * @return
+     *     possible object is
+     *     {@link ProteinType.RecommendedName }
+     *     
+     */
+    public ProteinType.RecommendedName getRecommendedName() {
+        return recommendedName;
+    }
+
+    /**
+     * Sets the value of the recommendedName property.
+     * 
+     * @param value
+     *     allowed object is
+     *     {@link ProteinType.RecommendedName }
+     *     
+     */
+    public void setRecommendedName(ProteinType.RecommendedName value) {
+        this.recommendedName = value;
+    }
+
+    /**
+     * Gets the value of the alternativeName property.
+     * 
+     * <p>
+     * This accessor method returns a reference to the live list,
+     * not a snapshot. Therefore any modification you make to the
+     * returned list will be present inside the JAXB object.
+     * This is why there is not a <CODE>set</CODE> method for the alternativeName property.
+     * 
+     * <p>
+     * For example, to add a new item, do as follows:
+     * <pre>
+     *    getAlternativeName().add(newItem);
+     * </pre>
+     * 
+     * 
+     * <p>
+     * Objects of the following type(s) are allowed in the list
+     * {@link ProteinType.AlternativeName }
+     * 
+     * 
+     */
+    public List<ProteinType.AlternativeName> getAlternativeName() {
+        if (alternativeName == null) {
+            alternativeName = new ArrayList<ProteinType.AlternativeName>();
+        }
+        return this.alternativeName;
+    }
+
+    /**
+     * Gets the value of the submittedName property.
+     * 
+     * <p>
+     * This accessor method returns a reference to the live list,
+     * not a snapshot. Therefore any modification you make to the
+     * returned list will be present inside the JAXB object.
+     * This is why there is not a <CODE>set</CODE> method for the submittedName property.
+     * 
+     * <p>
+     * For example, to add a new item, do as follows:
+     * <pre>
+     *    getSubmittedName().add(newItem);
+     * </pre>
+     * 
+     * 
+     * <p>
+     * Objects of the following type(s) are allowed in the list
+     * {@link ProteinType.SubmittedName }
+     * 
+     * 
+     */
+    public List<ProteinType.SubmittedName> getSubmittedName() {
+        if (submittedName == null) {
+            submittedName = new ArrayList<ProteinType.SubmittedName>();
+        }
+        return this.submittedName;
+    }
+
+    /**
+     * Gets the value of the allergenName property.
+     * 
+     * @return
+     *     possible object is
+     *     {@link EvidencedStringType }
+     *     
+     */
+    public EvidencedStringType getAllergenName() {
+        return allergenName;
+    }
+
+    /**
+     * Sets the value of the allergenName property.
+     * 
+     * @param value
+     *     allowed object is
+     *     {@link EvidencedStringType }
+     *     
+     */
+    public void setAllergenName(EvidencedStringType value) {
+        this.allergenName = value;
+    }
+
+    /**
+     * Gets the value of the biotechName property.
+     * 
+     * @return
+     *     possible object is
+     *     {@link EvidencedStringType }
+     *     
+     */
+    public EvidencedStringType getBiotechName() {
+        return biotechName;
+    }
+
+    /**
+     * Sets the value of the biotechName property.
+     * 
+     * @param value
+     *     allowed object is
+     *     {@link EvidencedStringType }
+     *     
+     */
+    public void setBiotechName(EvidencedStringType value) {
+        this.biotechName = value;
+    }
+
+    /**
+     * Gets the value of the cdAntigenName property.
+     * 
+     * <p>
+     * This accessor method returns a reference to the live list,
+     * not a snapshot. Therefore any modification you make to the
+     * returned list will be present inside the JAXB object.
+     * This is why there is not a <CODE>set</CODE> method for the cdAntigenName property.
+     * 
+     * <p>
+     * For example, to add a new item, do as follows:
+     * <pre>
+     *    getCdAntigenName().add(newItem);
+     * </pre>
+     * 
+     * 
+     * <p>
+     * Objects of the following type(s) are allowed in the list
+     * {@link EvidencedStringType }
+     * 
+     * 
+     */
+    public List<EvidencedStringType> getCdAntigenName() {
+        if (cdAntigenName == null) {
+            cdAntigenName = new ArrayList<EvidencedStringType>();
+        }
+        return this.cdAntigenName;
+    }
+
+    /**
+     * Gets the value of the innName property.
+     * 
+     * <p>
+     * This accessor method returns a reference to the live list,
+     * not a snapshot. Therefore any modification you make to the
+     * returned list will be present inside the JAXB object.
+     * This is why there is not a <CODE>set</CODE> method for the innName property.
+     * 
+     * <p>
+     * For example, to add a new item, do as follows:
+     * <pre>
+     *    getInnName().add(newItem);
+     * </pre>
+     * 
+     * 
+     * <p>
+     * Objects of the following type(s) are allowed in the list
+     * {@link EvidencedStringType }
+     * 
+     * 
+     */
+    public List<EvidencedStringType> getInnName() {
+        if (innName == null) {
+            innName = new ArrayList<EvidencedStringType>();
+        }
+        return this.innName;
+    }
+
+    /**
+     * Gets the value of the domain property.
+     * 
+     * <p>
+     * This accessor method returns a reference to the live list,
+     * not a snapshot. Therefore any modification you make to the
+     * returned list will be present inside the JAXB object.
+     * This is why there is not a <CODE>set</CODE> method for the domain property.
+     * 
+     * <p>
+     * For example, to add a new item, do as follows:
+     * <pre>
+     *    getDomain().add(newItem);
+     * </pre>
+     * 
+     * 
+     * <p>
+     * Objects of the following type(s) are allowed in the list
+     * {@link ProteinType.Domain }
+     * 
+     * 
+     */
+    public List<ProteinType.Domain> getDomain() {
+        if (domain == null) {
+            domain = new ArrayList<ProteinType.Domain>();
+        }
+        return this.domain;
+    }
+
+    /**
+     * Gets the value of the component property.
+     * 
+     * <p>
+     * This accessor method returns a reference to the live list,
+     * not a snapshot. Therefore any modification you make to the
+     * returned list will be present inside the JAXB object.
+     * This is why there is not a <CODE>set</CODE> method for the component property.
+     * 
+     * <p>
+     * For example, to add a new item, do as follows:
+     * <pre>
+     *    getComponent().add(newItem);
+     * </pre>
+     * 
+     * 
+     * <p>
+     * Objects of the following type(s) are allowed in the list
+     * {@link ProteinType.Component }
+     * 
+     * 
+     */
+    public List<ProteinType.Component> getComponent() {
+        if (component == null) {
+            component = new ArrayList<ProteinType.Component>();
+        }
+        return this.component;
+    }
+
+
+    /**
+     * <p>Java class for anonymous complex type.
+     * 
+     * <p>The following schema fragment specifies the expected content contained within this class.
+     * 
+     * <pre>
+     * &lt;complexType>
+     *   &lt;complexContent>
+     *     &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       &lt;sequence>
+     *         &lt;element name="fullName" type="{http://uniprot.org/uniprot}evidencedStringType" minOccurs="0"/>
+     *         &lt;element name="shortName" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
+     *         &lt;element name="ecNumber" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
+     *       &lt;/sequence>
+     *     &lt;/restriction>
+     *   &lt;/complexContent>
+     * &lt;/complexType>
+     * </pre>
+     * 
+     * 
+     */
+    @XmlAccessorType(XmlAccessType.FIELD)
+    @XmlType(name = "", propOrder = {
+        "fullName",
+        "shortName",
+        "ecNumber"
+    })
+    public static class AlternativeName {
+
+        protected EvidencedStringType fullName;
+        protected List<EvidencedStringType> shortName;
+        protected List<EvidencedStringType> ecNumber;
+
+        /**
+         * Gets the value of the fullName property.
+         * 
+         * @return
+         *     possible object is
+         *     {@link EvidencedStringType }
+         *     
+         */
+        public EvidencedStringType getFullName() {
+            return fullName;
+        }
+
+        /**
+         * Sets the value of the fullName property.
+         * 
+         * @param value
+         *     allowed object is
+         *     {@link EvidencedStringType }
+         *     
+         */
+        public void setFullName(EvidencedStringType value) {
+            this.fullName = value;
+        }
+
+        /**
+         * Gets the value of the shortName property.
+         * 
+         * <p>
+         * This accessor method returns a reference to the live list,
+         * not a snapshot. Therefore any modification you make to the
+         * returned list will be present inside the JAXB object.
+         * This is why there is not a <CODE>set</CODE> method for the shortName property.
+         * 
+         * <p>
+         * For example, to add a new item, do as follows:
+         * <pre>
+         *    getShortName().add(newItem);
+         * </pre>
+         * 
+         * 
+         * <p>
+         * Objects of the following type(s) are allowed in the list
+         * {@link EvidencedStringType }
+         * 
+         * 
+         */
+        public List<EvidencedStringType> getShortName() {
+            if (shortName == null) {
+                shortName = new ArrayList<EvidencedStringType>();
+            }
+            return this.shortName;
+        }
+
+        /**
+         * Gets the value of the ecNumber property.
+         * 
+         * <p>
+         * This accessor method returns a reference to the live list,
+         * not a snapshot. Therefore any modification you make to the
+         * returned list will be present inside the JAXB object.
+         * This is why there is not a <CODE>set</CODE> method for the ecNumber property.
+         * 
+         * <p>
+         * For example, to add a new item, do as follows:
+         * <pre>
+         *    getEcNumber().add(newItem);
+         * </pre>
+         * 
+         * 
+         * <p>
+         * Objects of the following type(s) are allowed in the list
+         * {@link EvidencedStringType }
+         * 
+         * 
+         */
+        public List<EvidencedStringType> getEcNumber() {
+            if (ecNumber == null) {
+                ecNumber = new ArrayList<EvidencedStringType>();
+            }
+            return this.ecNumber;
+        }
+
+    }
+
+
+    /**
+     * <p>Java class for anonymous complex type.
+     * 
+     * <p>The following schema fragment specifies the expected content contained within this class.
+     * 
+     * <pre>
+     * &lt;complexType>
+     *   &lt;complexContent>
+     *     &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       &lt;group ref="{http://uniprot.org/uniprot}proteinNameGroup"/>
+     *     &lt;/restriction>
+     *   &lt;/complexContent>
+     * &lt;/complexType>
+     * </pre>
+     * 
+     * 
+     */
+    @XmlAccessorType(XmlAccessType.FIELD)
+    @XmlType(name = "", propOrder = {
+        "recommendedName",
+        "alternativeName",
+        "submittedName",
+        "allergenName",
+        "biotechName",
+        "cdAntigenName",
+        "innName"
+    })
+    public static class Component {
+
+        protected ProteinType.RecommendedName recommendedName;
+        protected List<ProteinType.AlternativeName> alternativeName;
+        protected List<ProteinType.SubmittedName> submittedName;
+        protected EvidencedStringType allergenName;
+        protected EvidencedStringType biotechName;
+        protected List<EvidencedStringType> cdAntigenName;
+        protected List<EvidencedStringType> innName;
+
+        /**
+         * Gets the value of the recommendedName property.
+         * 
+         * @return
+         *     possible object is
+         *     {@link ProteinType.RecommendedName }
+         *     
+         */
+        public ProteinType.RecommendedName getRecommendedName() {
+            return recommendedName;
+        }
+
+        /**
+         * Sets the value of the recommendedName property.
+         * 
+         * @param value
+         *     allowed object is
+         *     {@link ProteinType.RecommendedName }
+         *     
+         */
+        public void setRecommendedName(ProteinType.RecommendedName value) {
+            this.recommendedName = value;
+        }
+
+        /**
+         * Gets the value of the alternativeName property.
+         * 
+         * <p>
+         * This accessor method returns a reference to the live list,
+         * not a snapshot. Therefore any modification you make to the
+         * returned list will be present inside the JAXB object.
+         * This is why there is not a <CODE>set</CODE> method for the alternativeName property.
+         * 
+         * <p>
+         * For example, to add a new item, do as follows:
+         * <pre>
+         *    getAlternativeName().add(newItem);
+         * </pre>
+         * 
+         * 
+         * <p>
+         * Objects of the following type(s) are allowed in the list
+         * {@link ProteinType.AlternativeName }
+         * 
+         * 
+         */
+        public List<ProteinType.AlternativeName> getAlternativeName() {
+            if (alternativeName == null) {
+                alternativeName = new ArrayList<ProteinType.AlternativeName>();
+            }
+            return this.alternativeName;
+        }
+
+        /**
+         * Gets the value of the submittedName property.
+         * 
+         * <p>
+         * This accessor method returns a reference to the live list,
+         * not a snapshot. Therefore any modification you make to the
+         * returned list will be present inside the JAXB object.
+         * This is why there is not a <CODE>set</CODE> method for the submittedName property.
+         * 
+         * <p>
+         * For example, to add a new item, do as follows:
+         * <pre>
+         *    getSubmittedName().add(newItem);
+         * </pre>
+         * 
+         * 
+         * <p>
+         * Objects of the following type(s) are allowed in the list
+         * {@link ProteinType.SubmittedName }
+         * 
+         * 
+         */
+        public List<ProteinType.SubmittedName> getSubmittedName() {
+            if (submittedName == null) {
+                submittedName = new ArrayList<ProteinType.SubmittedName>();
+            }
+            return this.submittedName;
+        }
+
+        /**
+         * Gets the value of the allergenName property.
+         * 
+         * @return
+         *     possible object is
+         *     {@link EvidencedStringType }
+         *     
+         */
+        public EvidencedStringType getAllergenName() {
+            return allergenName;
+        }
+
+        /**
+         * Sets the value of the allergenName property.
+         * 
+         * @param value
+         *     allowed object is
+         *     {@link EvidencedStringType }
+         *     
+         */
+        public void setAllergenName(EvidencedStringType value) {
+            this.allergenName = value;
+        }
+
+        /**
+         * Gets the value of the biotechName property.
+         * 
+         * @return
+         *     possible object is
+         *     {@link EvidencedStringType }
+         *     
+         */
+        public EvidencedStringType getBiotechName() {
+            return biotechName;
+        }
+
+        /**
+         * Sets the value of the biotechName property.
+         * 
+         * @param value
+         *     allowed object is
+         *     {@link EvidencedStringType }
+         *     
+         */
+        public void setBiotechName(EvidencedStringType value) {
+            this.biotechName = value;
+        }
+
+        /**
+         * Gets the value of the cdAntigenName property.
+         * 
+         * <p>
+         * This accessor method returns a reference to the live list,
+         * not a snapshot. Therefore any modification you make to the
+         * returned list will be present inside the JAXB object.
+         * This is why there is not a <CODE>set</CODE> method for the cdAntigenName property.
+         * 
+         * <p>
+         * For example, to add a new item, do as follows:
+         * <pre>
+         *    getCdAntigenName().add(newItem);
+         * </pre>
+         * 
+         * 
+         * <p>
+         * Objects of the following type(s) are allowed in the list
+         * {@link EvidencedStringType }
+         * 
+         * 
+         */
+        public List<EvidencedStringType> getCdAntigenName() {
+            if (cdAntigenName == null) {
+                cdAntigenName = new ArrayList<EvidencedStringType>();
+            }
+            return this.cdAntigenName;
+        }
+
+        /**
+         * Gets the value of the innName property.
+         * 
+         * <p>
+         * This accessor method returns a reference to the live list,
+         * not a snapshot. Therefore any modification you make to the
+         * returned list will be present inside the JAXB object.
+         * This is why there is not a <CODE>set</CODE> method for the innName property.
+         * 
+         * <p>
+         * For example, to add a new item, do as follows:
+         * <pre>
+         *    getInnName().add(newItem);
+         * </pre>
+         * 
+         * 
+         * <p>
+         * Objects of the following type(s) are allowed in the list
+         * {@link EvidencedStringType }
+         * 
+         * 
+         */
+        public List<EvidencedStringType> getInnName() {
+            if (innName == null) {
+                innName = new ArrayList<EvidencedStringType>();
+            }
+            return this.innName;
+        }
+
+    }
+
+
+    /**
+     * <p>Java class for anonymous complex type.
+     * 
+     * <p>The following schema fragment specifies the expected content contained within this class.
+     * 
+     * <pre>
+     * &lt;complexType>
+     *   &lt;complexContent>
+     *     &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       &lt;group ref="{http://uniprot.org/uniprot}proteinNameGroup"/>
+     *     &lt;/restriction>
+     *   &lt;/complexContent>
+     * &lt;/complexType>
+     * </pre>
+     * 
+     * 
+     */
+    @XmlAccessorType(XmlAccessType.FIELD)
+    @XmlType(name = "", propOrder = {
+        "recommendedName",
+        "alternativeName",
+        "submittedName",
+        "allergenName",
+        "biotechName",
+        "cdAntigenName",
+        "innName"
+    })
+    public static class Domain {
+
+        protected ProteinType.RecommendedName recommendedName;
+        protected List<ProteinType.AlternativeName> alternativeName;
+        protected List<ProteinType.SubmittedName> submittedName;
+        protected EvidencedStringType allergenName;
+        protected EvidencedStringType biotechName;
+        protected List<EvidencedStringType> cdAntigenName;
+        protected List<EvidencedStringType> innName;
+
+        /**
+         * Gets the value of the recommendedName property.
+         * 
+         * @return
+         *     possible object is
+         *     {@link ProteinType.RecommendedName }
+         *     
+         */
+        public ProteinType.RecommendedName getRecommendedName() {
+            return recommendedName;
+        }
+
+        /**
+         * Sets the value of the recommendedName property.
+         * 
+         * @param value
+         *     allowed object is
+         *     {@link ProteinType.RecommendedName }
+         *     
+         */
+        public void setRecommendedName(ProteinType.RecommendedName value) {
+            this.recommendedName = value;
+        }
+
+        /**
+         * Gets the value of the alternativeName property.
+         * 
+         * <p>
+         * This accessor method returns a reference to the live list,
+         * not a snapshot. Therefore any modification you make to the
+         * returned list will be present inside the JAXB object.
+         * This is why there is not a <CODE>set</CODE> method for the alternativeName property.
+         * 
+         * <p>
+         * For example, to add a new item, do as follows:
+         * <pre>
+         *    getAlternativeName().add(newItem);
+         * </pre>
+         * 
+         * 
+         * <p>
+         * Objects of the following type(s) are allowed in the list
+         * {@link ProteinType.AlternativeName }
+         * 
+         * 
+         */
+        public List<ProteinType.AlternativeName> getAlternativeName() {
+            if (alternativeName == null) {
+                alternativeName = new ArrayList<ProteinType.AlternativeName>();
+            }
+            return this.alternativeName;
+        }
+
+        /**
+         * Gets the value of the submittedName property.
+         * 
+         * <p>
+         * This accessor method returns a reference to the live list,
+         * not a snapshot. Therefore any modification you make to the
+         * returned list will be present inside the JAXB object.
+         * This is why there is not a <CODE>set</CODE> method for the submittedName property.
+         * 
+         * <p>
+         * For example, to add a new item, do as follows:
+         * <pre>
+         *    getSubmittedName().add(newItem);
+         * </pre>
+         * 
+         * 
+         * <p>
+         * Objects of the following type(s) are allowed in the list
+         * {@link ProteinType.SubmittedName }
+         * 
+         * 
+         */
+        public List<ProteinType.SubmittedName> getSubmittedName() {
+            if (submittedName == null) {
+                submittedName = new ArrayList<ProteinType.SubmittedName>();
+            }
+            return this.submittedName;
+        }
+
+        /**
+         * Gets the value of the allergenName property.
+         * 
+         * @return
+         *     possible object is
+         *     {@link EvidencedStringType }
+         *     
+         */
+        public EvidencedStringType getAllergenName() {
+            return allergenName;
+        }
+
+        /**
+         * Sets the value of the allergenName property.
+         * 
+         * @param value
+         *     allowed object is
+         *     {@link EvidencedStringType }
+         *     
+         */
+        public void setAllergenName(EvidencedStringType value) {
+            this.allergenName = value;
+        }
+
+        /**
+         * Gets the value of the biotechName property.
+         * 
+         * @return
+         *     possible object is
+         *     {@link EvidencedStringType }
+         *     
+         */
+        public EvidencedStringType getBiotechName() {
+            return biotechName;
+        }
+
+        /**
+         * Sets the value of the biotechName property.
+         * 
+         * @param value
+         *     allowed object is
+         *     {@link EvidencedStringType }
+         *     
+         */
+        public void setBiotechName(EvidencedStringType value) {
+            this.biotechName = value;
+        }
+
+        /**
+         * Gets the value of the cdAntigenName property.
+         * 
+         * <p>
+         * This accessor method returns a reference to the live list,
+         * not a snapshot. Therefore any modification you make to the
+         * returned list will be present inside the JAXB object.
+         * This is why there is not a <CODE>set</CODE> method for the cdAntigenName property.
+         * 
+         * <p>
+         * For example, to add a new item, do as follows:
+         * <pre>
+         *    getCdAntigenName().add(newItem);
+         * </pre>
+         * 
+         * 
+         * <p>
+         * Objects of the following type(s) are allowed in the list
+         * {@link EvidencedStringType }
+         * 
+         * 
+         */
+        public List<EvidencedStringType> getCdAntigenName() {
+            if (cdAntigenName == null) {
+                cdAntigenName = new ArrayList<EvidencedStringType>();
+            }
+            return this.cdAntigenName;
+        }
+
+        /**
+         * Gets the value of the innName property.
+         * 
+         * <p>
+         * This accessor method returns a reference to the live list,
+         * not a snapshot. Therefore any modification you make to the
+         * returned list will be present inside the JAXB object.
+         * This is why there is not a <CODE>set</CODE> method for the innName property.
+         * 
+         * <p>
+         * For example, to add a new item, do as follows:
+         * <pre>
+         *    getInnName().add(newItem);
+         * </pre>
+         * 
+         * 
+         * <p>
+         * Objects of the following type(s) are allowed in the list
+         * {@link EvidencedStringType }
+         * 
+         * 
+         */
+        public List<EvidencedStringType> getInnName() {
+            if (innName == null) {
+                innName = new ArrayList<EvidencedStringType>();
+            }
+            return this.innName;
+        }
+
+    }
+
+
+    /**
+     * <p>Java class for anonymous complex type.
+     * 
+     * <p>The following schema fragment specifies the expected content contained within this class.
+     * 
+     * <pre>
+     * &lt;complexType>
+     *   &lt;complexContent>
+     *     &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       &lt;sequence>
+     *         &lt;element name="fullName" type="{http://uniprot.org/uniprot}evidencedStringType"/>
+     *         &lt;element name="shortName" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
+     *         &lt;element name="ecNumber" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
+     *       &lt;/sequence>
+     *     &lt;/restriction>
+     *   &lt;/complexContent>
+     * &lt;/complexType>
+     * </pre>
+     * 
+     * 
+     */
+    @XmlAccessorType(XmlAccessType.FIELD)
+    @XmlType(name = "", propOrder = {
+        "fullName",
+        "shortName",
+        "ecNumber"
+    })
+    public static class RecommendedName {
+
+        @XmlElement(required = true)
+        protected EvidencedStringType fullName;
+        protected List<EvidencedStringType> shortName;
+        protected List<EvidencedStringType> ecNumber;
+
+        /**
+         * Gets the value of the fullName property.
+         * 
+         * @return
+         *     possible object is
+         *     {@link EvidencedStringType }
+         *     
+         */
+        public EvidencedStringType getFullName() {
+            return fullName;
+        }
+
+        /**
+         * Sets the value of the fullName property.
+         * 
+         * @param value
+         *     allowed object is
+         *     {@link EvidencedStringType }
+         *     
+         */
+        public void setFullName(EvidencedStringType value) {
+            this.fullName = value;
+        }
+
+        /**
+         * Gets the value of the shortName property.
+         * 
+         * <p>
+         * This accessor method returns a reference to the live list,
+         * not a snapshot. Therefore any modification you make to the
+         * returned list will be present inside the JAXB object.
+         * This is why there is not a <CODE>set</CODE> method for the shortName property.
+         * 
+         * <p>
+         * For example, to add a new item, do as follows:
+         * <pre>
+         *    getShortName().add(newItem);
+         * </pre>
+         * 
+         * 
+         * <p>
+         * Objects of the following type(s) are allowed in the list
+         * {@link EvidencedStringType }
+         * 
+         * 
+         */
+        public List<EvidencedStringType> getShortName() {
+            if (shortName == null) {
+                shortName = new ArrayList<EvidencedStringType>();
+            }
+            return this.shortName;
+        }
+
+        /**
+         * Gets the value of the ecNumber property.
+         * 
+         * <p>
+         * This accessor method returns a reference to the live list,
+         * not a snapshot. Therefore any modification you make to the
+         * returned list will be present inside the JAXB object.
+         * This is why there is not a <CODE>set</CODE> method for the ecNumber property.
+         * 
+         * <p>
+         * For example, to add a new item, do as follows:
+         * <pre>
+         *    getEcNumber().add(newItem);
+         * </pre>
+         * 
+         * 
+         * <p>
+         * Objects of the following type(s) are allowed in the list
+         * {@link EvidencedStringType }
+         * 
+         * 
+         */
+        public List<EvidencedStringType> getEcNumber() {
+            if (ecNumber == null) {
+                ecNumber = new ArrayList<EvidencedStringType>();
+            }
+            return this.ecNumber;
+        }
+
+    }
+
+
+    /**
+     * <p>Java class for anonymous complex type.
+     * 
+     * <p>The following schema fragment specifies the expected content contained within this class.
+     * 
+     * <pre>
+     * &lt;complexType>
+     *   &lt;complexContent>
+     *     &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       &lt;sequence>
+     *         &lt;element name="fullName" type="{http://uniprot.org/uniprot}evidencedStringType"/>
+     *         &lt;element name="ecNumber" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
+     *       &lt;/sequence>
+     *     &lt;/restriction>
+     *   &lt;/complexContent>
+     * &lt;/complexType>
+     * </pre>
+     * 
+     * 
+     */
+    @XmlAccessorType(XmlAccessType.FIELD)
+    @XmlType(name = "", propOrder = {
+        "fullName",
+        "ecNumber"
+    })
+    public static class SubmittedName {
+
+        @XmlElement(required = true)
+        protected EvidencedStringType fullName;
+        protected List<EvidencedStringType> ecNumber;
+
+        /**
+         * Gets the value of the fullName property.
+         * 
+         * @return
+         *     possible object is
+         *     {@link EvidencedStringType }
+         *     
+         */
+        public EvidencedStringType getFullName() {
+            return fullName;
+        }
+
+        /**
+         * Sets the value of the fullName property.
+         * 
+         * @param value
+         *     allowed object is
+         *     {@link EvidencedStringType }
+         *     
+         */
+        public void setFullName(EvidencedStringType value) {
+            this.fullName = value;
+        }
+
+        /**
+         * Gets the value of the ecNumber property.
+         * 
+         * <p>
+         * This accessor method returns a reference to the live list,
+         * not a snapshot. Therefore any modification you make to the
+         * returned list will be present inside the JAXB object.
+         * This is why there is not a <CODE>set</CODE> method for the ecNumber property.
+         * 
+         * <p>
+         * For example, to add a new item, do as follows:
+         * <pre>
+         *    getEcNumber().add(newItem);
+         * </pre>
+         * 
+         * 
+         * <p>
+         * Objects of the following type(s) are allowed in the list
+         * {@link EvidencedStringType }
+         * 
+         * 
+         */
+        public List<EvidencedStringType> getEcNumber() {
+            if (ecNumber == null) {
+                ecNumber = new ArrayList<EvidencedStringType>();
+            }
+            return this.ecNumber;
+        }
+
+    }
+
+}