removed all dasobert code and begun to replace with Jdas calls.

[jalview.git] / src / org / biojava / dasobert / dasregistry / DasSource.java

diff --git a/src/org/biojava/dasobert/dasregistry/DasSource.java b/src/org/biojava/dasobert/dasregistry/DasSource.java
deleted file mode 100755 (executable)
index 892963b..0000000
--- a/src/org/biojava/dasobert/dasregistry/DasSource.java
+++ /dev/null
@@ -1,130 +0,0 @@
-/*
- *                  BioJava development code
- *
- * This code may be freely distributed and modified under the
- * terms of the GNU Lesser General Public Licence.  This should
- * be distributed with the code.  If you do not have a copy,
- * see:
- *
- *      http://www.gnu.org/copyleft/lesser.html
- *
- * Copyright for this code is held jointly by the individual
- * authors.  These should be listed in @author doc comments.
- *
- * For more information on the BioJava project and its aims,
- * or to join the biojava-l mailing list, visit the home page
- * at:
- *
- *      http://www.biojava.org/
- *
- * Created on Feb 8, 2006
- *
- */
-package org.biojava.dasobert.dasregistry;
-
-import java.util.*;
-
-public interface DasSource
-{
-
-  public void setLocal(boolean flag);
-
-  public boolean isLocal();
-
-  /**
-   * compare if two das sources are equal
-   * 
-   * @param ds
-   * @return returns true if two DAS sources are equivalent
-   */
-  public boolean equals(DasSource ds);
-
-  /**
-   * classes that implement equals, should also implement hashKey
-   * 
-   * @return the hash code of a das source
-   */
-  public int hashCode();
-
-  public void setId(String i);
-
-  /**
-   * get a the Id of the DasSource. The Id is a unique db identifier. The public
-   * DAS-Registry has Auto_Ids that look like DASSOURCE:12345; public look like
-   * XYZ:12345, where the XYZ prefix can be configured in the config file.
-   * 
-   * @return String the ID of a Das Source
-   */
-  public String getId();
-
-  public void setNickname(String name);
-
-  public String getNickname();
-
-  public void setUrl(String u);
-
-  public void setAdminemail(String u);
-
-  public void setDescription(String u);
-
-  public void setCoordinateSystem(DasCoordinateSystem[] u);
-
-  public void setCapabilities(String[] u);
-
-  /**
-   * test if a this source has a particular capability
-   * 
-   * @param testCapability
-   * @return <code>true</code> if the server has this capability.
-   */
-  public boolean hasCapability(String testCapability);
-
-  public String getUrl();
-
-  public String getAdminemail();
-
-  public String getDescription();
-
-  public String[] getCapabilities();
-
-  public DasCoordinateSystem[] getCoordinateSystem();
-
-  public void setRegisterDate(Date d);
-
-  public Date getRegisterDate();
-
-  public void setLeaseDate(Date d);
-
-  public Date getLeaseDate();
-
-  public void setLabels(String[] ls);
-
-  public String[] getLabels();
-
-  public void setHelperurl(String url);
-
-  public String getHelperurl();
-
-  // TestCode is now part of the coordinate system!
-  // public void setTestCode(String code);
-  // public String getTestCode();
-
-  public void setAlertAdmin(boolean flag);
-
-  public boolean getAlertAdmin();
-
-  /**
-   * set Properties for this DAS source, e.g. project name
-   * 
-   * @param properties
-   */
-  public void setProperties(Map properties);
-
-  /**
-   * get Properties for this DAS source
-   * 
-   * @return Properties
-   */
-  public Map getProperties();
-
-}
\ No newline at end of file