After branch merge
[jalview.git] / src / uk / ac / ebi / www / WSWUBlastSoapBindingStub.java
diff --git a/src/uk/ac/ebi/www/WSWUBlastSoapBindingStub.java b/src/uk/ac/ebi/www/WSWUBlastSoapBindingStub.java
new file mode 100755 (executable)
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+/**
+ * WSWUBlastSoapBindingStub.java
+ *
+ * This file was auto-generated from WSDL
+ * by the Apache Axis WSDL2Java emitter.
+ */
+
+package uk.ac.ebi.www;
+
+public class WSWUBlastSoapBindingStub extends org.apache.axis.client.Stub implements uk.ac.ebi.www.WSWUBlast {
+    private java.util.Vector cachedSerClasses = new java.util.Vector();
+    private java.util.Vector cachedSerQNames = new java.util.Vector();
+    private java.util.Vector cachedSerFactories = new java.util.Vector();
+    private java.util.Vector cachedDeserFactories = new java.util.Vector();
+
+    public WSWUBlastSoapBindingStub() throws org.apache.axis.AxisFault {
+         this(null);
+    }
+
+    public WSWUBlastSoapBindingStub(java.net.URL endpointURL, javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {
+         this(service);
+         super.cachedEndpoint = endpointURL;
+    }
+
+    public WSWUBlastSoapBindingStub(javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {
+        if (service == null) {
+            super.service = new org.apache.axis.client.Service();
+        } else {
+            super.service = service;
+        }
+            java.lang.Class cls;
+            javax.xml.namespace.QName qName;
+            java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;
+            java.lang.Class beandf = org.apache.axis.encoding.ser.BeanDeserializerFactory.class;
+            java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;
+            java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;
+            java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;
+            java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;
+            java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;
+            java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;
+            qName = new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "inputParams");
+            cachedSerQNames.add(qName);
+            cls = uk.ac.ebi.www.InputParams.class;
+            cachedSerClasses.add(cls);
+            cachedSerFactories.add(beansf);
+            cachedDeserFactories.add(beandf);
+
+            qName = new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "WSArrayofFile");
+            cachedSerQNames.add(qName);
+            cls = uk.ac.ebi.www.WSFile[].class;
+            cachedSerClasses.add(cls);
+            cachedSerFactories.add(arraysf);
+            cachedDeserFactories.add(arraydf);
+
+            qName = new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "WSArrayofData");
+            cachedSerQNames.add(qName);
+            cls = uk.ac.ebi.www.Data[].class;
+            cachedSerClasses.add(cls);
+            cachedSerFactories.add(arraysf);
+            cachedDeserFactories.add(arraydf);
+
+            qName = new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "data");
+            cachedSerQNames.add(qName);
+            cls = uk.ac.ebi.www.Data.class;
+            cachedSerClasses.add(cls);
+            cachedSerFactories.add(beansf);
+            cachedDeserFactories.add(beandf);
+
+            qName = new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "WSFile");
+            cachedSerQNames.add(qName);
+            cls = uk.ac.ebi.www.WSFile.class;
+            cachedSerClasses.add(cls);
+            cachedSerFactories.add(beansf);
+            cachedDeserFactories.add(beandf);
+
+    }
+
+    private org.apache.axis.client.Call createCall() throws java.rmi.RemoteException {
+        try {
+            org.apache.axis.client.Call _call =
+                    (org.apache.axis.client.Call) super.service.createCall();
+            if (super.maintainSessionSet) {
+                _call.setMaintainSession(super.maintainSession);
+            }
+            if (super.cachedUsername != null) {
+                _call.setUsername(super.cachedUsername);
+            }
+            if (super.cachedPassword != null) {
+                _call.setPassword(super.cachedPassword);
+            }
+            if (super.cachedEndpoint != null) {
+                _call.setTargetEndpointAddress(super.cachedEndpoint);
+            }
+            if (super.cachedTimeout != null) {
+                _call.setTimeout(super.cachedTimeout);
+            }
+            if (super.cachedPortName != null) {
+                _call.setPortName(super.cachedPortName);
+            }
+            java.util.Enumeration keys = super.cachedProperties.keys();
+            while (keys.hasMoreElements()) {
+                java.lang.String key = (java.lang.String) keys.nextElement();
+                if(_call.isPropertySupported(key))
+                    _call.setProperty(key, super.cachedProperties.get(key));
+              //  else
+                 //   _call.setScopedProperty(key, super.cachedProperties.get(key));
+            }
+            // All the type mapping information is registered
+            // when the first call is made.
+            // The type mapping information is actually registered in
+            // the TypeMappingRegistry of the service, which
+            // is the reason why registration is only needed for the first call.
+            synchronized (this) {
+                if (firstCall()) {
+                    // must set encoding style before registering serializers
+                    _call.setEncodingStyle(org.apache.axis.Constants.URI_SOAP11_ENC);
+                    for (int i = 0; i < cachedSerFactories.size(); ++i) {
+                        java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);
+                        javax.xml.namespace.QName qName =
+                                (javax.xml.namespace.QName) cachedSerQNames.get(i);
+                        java.lang.Class sf = (java.lang.Class)
+                                 cachedSerFactories.get(i);
+                        java.lang.Class df = (java.lang.Class)
+                                 cachedDeserFactories.get(i);
+                        _call.registerTypeMapping(cls, qName, sf, df, false);
+                    }
+                }
+            }
+            return _call;
+        }
+        catch (java.lang.Throwable t) {
+            throw new org.apache.axis.AxisFault("Failure trying to get the Call object", t);
+        }
+    }
+
+    public byte[] poll(java.lang.String jobid, java.lang.String type) throws java.rmi.RemoteException {
+        if (super.cachedEndpoint == null) {
+            throw new org.apache.axis.NoEndPointException();
+        }
+        org.apache.axis.client.Call _call = createCall();
+        _call.addParameter(new javax.xml.namespace.QName("", "jobid"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, javax.xml.rpc.ParameterMode.IN);
+        _call.addParameter(new javax.xml.namespace.QName("", "type"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, javax.xml.rpc.ParameterMode.IN);
+        _call.setReturnType(new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "base64Binary"), byte[].class);
+        _call.setUseSOAPAction(true);
+        _call.setSOAPActionURI("http://www.ebi.ac.uk/WSWUBlast#poll");
+        _call.setOperationStyle("rpc");
+        _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "poll"));
+
+        java.lang.Object _resp = _call.invoke(new java.lang.Object[] {jobid, type});
+
+        if (_resp instanceof java.rmi.RemoteException) {
+            throw (java.rmi.RemoteException)_resp;
+        }
+        else {
+            try {
+                return (byte[]) _resp;
+            } catch (java.lang.Exception _exception) {
+                return (byte[]) org.apache.axis.utils.JavaUtils.convert(_resp, byte[].class);
+            }
+        }
+    }
+
+    public java.lang.String runWUBlast(uk.ac.ebi.www.InputParams params, uk.ac.ebi.www.Data[] content) throws java.rmi.RemoteException {
+        if (super.cachedEndpoint == null) {
+            throw new org.apache.axis.NoEndPointException();
+        }
+        org.apache.axis.client.Call _call = createCall();
+        _call.addParameter(new javax.xml.namespace.QName("", "params"), new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "inputParams"), uk.ac.ebi.www.InputParams.class, javax.xml.rpc.ParameterMode.IN);
+        _call.addParameter(new javax.xml.namespace.QName("", "content"), new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "WSArrayofData"), uk.ac.ebi.www.Data[].class, javax.xml.rpc.ParameterMode.IN);
+        _call.setReturnType(new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class);
+        _call.setUseSOAPAction(true);
+        _call.setSOAPActionURI("http://www.ebi.ac.uk/WSWUBlast#runWUBlast");
+        _call.setOperationStyle("rpc");
+        _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "runWUBlast"));
+
+        java.lang.Object _resp = _call.invoke(new java.lang.Object[] {params, content});
+
+        if (_resp instanceof java.rmi.RemoteException) {
+            throw (java.rmi.RemoteException)_resp;
+        }
+        else {
+            try {
+                return (java.lang.String) _resp;
+            } catch (java.lang.Exception _exception) {
+                return (java.lang.String) org.apache.axis.utils.JavaUtils.convert(_resp, java.lang.String.class);
+            }
+        }
+    }
+
+    public byte[] test(java.lang.String jobid, java.lang.String type) throws java.rmi.RemoteException {
+        if (super.cachedEndpoint == null) {
+            throw new org.apache.axis.NoEndPointException();
+        }
+        org.apache.axis.client.Call _call = createCall();
+        _call.addParameter(new javax.xml.namespace.QName("", "jobid"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, javax.xml.rpc.ParameterMode.IN);
+        _call.addParameter(new javax.xml.namespace.QName("", "type"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, javax.xml.rpc.ParameterMode.IN);
+        _call.setReturnType(new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "base64Binary"), byte[].class);
+        _call.setUseSOAPAction(true);
+        _call.setSOAPActionURI("http://www.ebi.ac.uk/WSWUBlast#test");
+        _call.setOperationStyle("rpc");
+        _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "test"));
+
+        java.lang.Object _resp = _call.invoke(new java.lang.Object[] {jobid, type});
+
+        if (_resp instanceof java.rmi.RemoteException) {
+            throw (java.rmi.RemoteException)_resp;
+        }
+        else {
+            try {
+                return (byte[]) _resp;
+            } catch (java.lang.Exception _exception) {
+                return (byte[]) org.apache.axis.utils.JavaUtils.convert(_resp, byte[].class);
+            }
+        }
+    }
+
+    public java.lang.String checkStatus(java.lang.String jobid) throws java.rmi.RemoteException {
+        if (super.cachedEndpoint == null) {
+            throw new org.apache.axis.NoEndPointException();
+        }
+        org.apache.axis.client.Call _call = createCall();
+        _call.addParameter(new javax.xml.namespace.QName("", "jobid"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, javax.xml.rpc.ParameterMode.IN);
+        _call.setReturnType(new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class);
+        _call.setUseSOAPAction(true);
+        _call.setSOAPActionURI("http://www.ebi.ac.uk/WSWUBlast#checkStatus");
+        _call.setOperationStyle("rpc");
+        _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "checkStatus"));
+
+        java.lang.Object _resp = _call.invoke(new java.lang.Object[] {jobid});
+
+        if (_resp instanceof java.rmi.RemoteException) {
+            throw (java.rmi.RemoteException)_resp;
+        }
+        else {
+            try {
+                return (java.lang.String) _resp;
+            } catch (java.lang.Exception _exception) {
+                return (java.lang.String) org.apache.axis.utils.JavaUtils.convert(_resp, java.lang.String.class);
+            }
+        }
+    }
+
+    public uk.ac.ebi.www.WSFile[] getResults(java.lang.String jobid) throws java.rmi.RemoteException {
+        if (super.cachedEndpoint == null) {
+            throw new org.apache.axis.NoEndPointException();
+        }
+        org.apache.axis.client.Call _call = createCall();
+        _call.addParameter(new javax.xml.namespace.QName("", "jobid"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, javax.xml.rpc.ParameterMode.IN);
+        _call.setReturnType(new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "WSArrayofFile"), uk.ac.ebi.www.WSFile[].class);
+        _call.setUseSOAPAction(true);
+        _call.setSOAPActionURI("http://www.ebi.ac.uk/WSWUBlast#getResults");
+        _call.setOperationStyle("rpc");
+        _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "getResults"));
+
+        java.lang.Object _resp = _call.invoke(new java.lang.Object[] {jobid});
+
+        if (_resp instanceof java.rmi.RemoteException) {
+            throw (java.rmi.RemoteException)_resp;
+        }
+        else {
+            try {
+                return (uk.ac.ebi.www.WSFile[]) _resp;
+            } catch (java.lang.Exception _exception) {
+                return (uk.ac.ebi.www.WSFile[]) org.apache.axis.utils.JavaUtils.convert(_resp, uk.ac.ebi.www.WSFile[].class);
+            }
+        }
+    }
+
+    public byte[] polljob(java.lang.String jobid, java.lang.String outformat) throws java.rmi.RemoteException {
+        if (super.cachedEndpoint == null) {
+            throw new org.apache.axis.NoEndPointException();
+        }
+        org.apache.axis.client.Call _call = createCall();
+        _call.addParameter(new javax.xml.namespace.QName("", "jobid"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, javax.xml.rpc.ParameterMode.IN);
+        _call.addParameter(new javax.xml.namespace.QName("", "outformat"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, javax.xml.rpc.ParameterMode.IN);
+        _call.setReturnType(new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "base64Binary"), byte[].class);
+        _call.setUseSOAPAction(true);
+        _call.setSOAPActionURI("http://www.ebi.ac.uk/WSWUBlast#polljob");
+        _call.setOperationStyle("rpc");
+        _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "polljob"));
+
+        java.lang.Object _resp = _call.invoke(new java.lang.Object[] {jobid, outformat});
+
+        if (_resp instanceof java.rmi.RemoteException) {
+            throw (java.rmi.RemoteException)_resp;
+        }
+        else {
+            try {
+                return (byte[]) _resp;
+            } catch (java.lang.Exception _exception) {
+                return (byte[]) org.apache.axis.utils.JavaUtils.convert(_resp, byte[].class);
+            }
+        }
+    }
+
+    public byte[] doWUBlast(uk.ac.ebi.www.InputParams params, byte[] content) throws java.rmi.RemoteException {
+        if (super.cachedEndpoint == null) {
+            throw new org.apache.axis.NoEndPointException();
+        }
+        org.apache.axis.client.Call _call = createCall();
+        _call.addParameter(new javax.xml.namespace.QName("", "params"), new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "inputParams"), uk.ac.ebi.www.InputParams.class, javax.xml.rpc.ParameterMode.IN);
+        _call.addParameter(new javax.xml.namespace.QName("", "content"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "base64Binary"), byte[].class, javax.xml.rpc.ParameterMode.IN);
+        _call.setReturnType(new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "base64Binary"), byte[].class);
+        _call.setUseSOAPAction(true);
+        _call.setSOAPActionURI("http://www.ebi.ac.uk/WSWUBlast#doWUBlast");
+        _call.setOperationStyle("rpc");
+        _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/WSWUBlast", "doWUBlast"));
+
+        java.lang.Object _resp = _call.invoke(new java.lang.Object[] {params, content});
+
+        if (_resp instanceof java.rmi.RemoteException) {
+            throw (java.rmi.RemoteException)_resp;
+        }
+        else {
+            try {
+                return (byte[]) _resp;
+            } catch (java.lang.Exception _exception) {
+                return (byte[]) org.apache.axis.utils.JavaUtils.convert(_resp, byte[].class);
+            }
+        }
+    }
+
+}