--- /dev/null
+/**\r
+ * AccessionMapperBindingStub.java\r
+ *\r
+ * This file was auto-generated from WSDL\r
+ * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.\r
+ */\r
+\r
+package uk.ac.ebi.www.picr.AccessionMappingService;\r
+\r
+public class AccessionMapperBindingStub extends org.apache.axis.client.Stub implements uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperInterface {\r
+ private java.util.Vector cachedSerClasses = new java.util.Vector();\r
+ private java.util.Vector cachedSerQNames = new java.util.Vector();\r
+ private java.util.Vector cachedSerFactories = new java.util.Vector();\r
+ private java.util.Vector cachedDeserFactories = new java.util.Vector();\r
+\r
+ static org.apache.axis.description.OperationDesc [] _operations;\r
+\r
+ static {\r
+ _operations = new org.apache.axis.description.OperationDesc[3];\r
+ _initOperationDesc1();\r
+ }
+\r
+ private static void _initOperationDesc1(){\r
+ org.apache.axis.description.OperationDesc oper;\r
+ oper = new org.apache.axis.description.OperationDesc();\r
+ oper.setName("getUPIForSequence");\r
+ oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "sequence"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);\r
+ oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "searchDatabases"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String[].class, org.apache.axis.description.ParameterDesc.IN, false, false);\r
+ oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "taxonId"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);\r
+ oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "onlyActive"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "boolean"), boolean.class, org.apache.axis.description.ParameterDesc.IN, false, false);\r
+ oper.setReturnType(new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk", "UPEntry"));\r
+ oper.setReturnClass(uk.ac.ebi.picr.model.UPEntry.class);\r
+ oper.setReturnQName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getUPIForSequenceReturn"));\r
+ oper.setStyle(org.apache.axis.constants.Style.WRAPPED);\r
+ oper.setUse(org.apache.axis.constants.Use.LITERAL);\r
+ _operations[0] = oper;\r
+\r
+ oper = new org.apache.axis.description.OperationDesc();\r
+ oper.setName("getUPIForAccession");\r
+ oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "accession"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);\r
+ oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "ac_version"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);\r
+ oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "searchDatabases"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String[].class, org.apache.axis.description.ParameterDesc.IN, false, false);\r
+ oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "taxonId"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);\r
+ oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "onlyActive"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "boolean"), boolean.class, org.apache.axis.description.ParameterDesc.IN, false, false);\r
+ oper.setReturnType(new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk", "UPEntry"));\r
+ oper.setReturnClass(uk.ac.ebi.picr.model.UPEntry[].class);\r
+ oper.setReturnQName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getUPIForAccessionReturn"));\r
+ oper.setStyle(org.apache.axis.constants.Style.WRAPPED);\r
+ oper.setUse(org.apache.axis.constants.Use.LITERAL);\r
+ _operations[1] = oper;\r
+\r
+ oper = new org.apache.axis.description.OperationDesc();\r
+ oper.setName("getMappedDatabaseNames");\r
+ oper.setReturnType(new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"));\r
+ oper.setReturnClass(java.lang.String[].class);\r
+ oper.setReturnQName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "mappedDatabases"));\r
+ oper.setStyle(org.apache.axis.constants.Style.WRAPPED);\r
+ oper.setUse(org.apache.axis.constants.Use.LITERAL);\r
+ _operations[2] = oper;\r
+\r
+ }\r
+\r
+ public AccessionMapperBindingStub() throws org.apache.axis.AxisFault {\r
+ this(null);\r
+ }\r
+\r
+ public AccessionMapperBindingStub(java.net.URL endpointURL, javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {\r
+ this(service);\r
+ super.cachedEndpoint = endpointURL;\r
+ }\r
+\r
+ public AccessionMapperBindingStub(javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {\r
+ if (service == null) {\r
+ super.service = new org.apache.axis.client.Service();\r
+ } else {\r
+ super.service = service;\r
+ }\r
+ java.lang.Class cls;\r
+ javax.xml.namespace.QName qName;\r
+ java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;\r
+ java.lang.Class beandf = org.apache.axis.encoding.ser.BeanDeserializerFactory.class;\r
+ java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;\r
+ java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;\r
+ java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;\r
+ java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;\r
+ java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;\r
+ java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;\r
+ java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;\r
+ java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;\r
+ qName = new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk", "UPEntry");\r
+ cachedSerQNames.add(qName);\r
+ cls = uk.ac.ebi.picr.model.UPEntry.class;\r
+ cachedSerClasses.add(cls);\r
+ cachedSerFactories.add(beansf);\r
+ cachedDeserFactories.add(beandf);\r
+\r
+ qName = new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk", "CrossReference");\r
+ cachedSerQNames.add(qName);\r
+ cls = uk.ac.ebi.picr.model.CrossReference.class;\r
+ cachedSerClasses.add(cls);\r
+ cachedSerFactories.add(beansf);\r
+ cachedDeserFactories.add(beandf);\r
+\r
+ }\r
+\r
+ protected org.apache.axis.client.Call createCall() throws java.rmi.RemoteException {\r
+ try {\r
+ org.apache.axis.client.Call _call =\r
+ (org.apache.axis.client.Call) super.service.createCall();\r
+ if (super.maintainSessionSet) {\r
+ _call.setMaintainSession(super.maintainSession);\r
+ }\r
+ if (super.cachedUsername != null) {\r
+ _call.setUsername(super.cachedUsername);\r
+ }\r
+ if (super.cachedPassword != null) {\r
+ _call.setPassword(super.cachedPassword);\r
+ }\r
+ if (super.cachedEndpoint != null) {\r
+ _call.setTargetEndpointAddress(super.cachedEndpoint);\r
+ }\r
+ if (super.cachedTimeout != null) {\r
+ _call.setTimeout(super.cachedTimeout);\r
+ }\r
+ if (super.cachedPortName != null) {\r
+ _call.setPortName(super.cachedPortName);\r
+ }\r
+ java.util.Enumeration keys = super.cachedProperties.keys();\r
+ while (keys.hasMoreElements()) {\r
+ java.lang.String key = (java.lang.String) keys.nextElement();\r
+ _call.setProperty(key, super.cachedProperties.get(key));\r
+ }\r
+ // All the type mapping information is registered\r
+ // when the first call is made.\r
+ // The type mapping information is actually registered in\r
+ // the TypeMappingRegistry of the service, which\r
+ // is the reason why registration is only needed for the first call.\r
+ synchronized (this) {\r
+ if (firstCall()) {\r
+ // must set encoding style before registering serializers\r
+ _call.setEncodingStyle(null);\r
+ for (int i = 0; i < cachedSerFactories.size(); ++i) {\r
+ java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);\r
+ javax.xml.namespace.QName qName =\r
+ (javax.xml.namespace.QName) cachedSerQNames.get(i);\r
+ java.lang.Class sf = (java.lang.Class)\r
+ cachedSerFactories.get(i);\r
+ java.lang.Class df = (java.lang.Class)\r
+ cachedDeserFactories.get(i);\r
+ _call.registerTypeMapping(cls, qName, sf, df, false);\r
+ }\r
+ }\r
+ }\r
+ return _call;\r
+ }\r
+ catch (java.lang.Throwable _t) {\r
+ throw new org.apache.axis.AxisFault("Failure trying to get the Call object", _t);\r
+ }\r
+ }\r
+\r
+ public uk.ac.ebi.picr.model.UPEntry getUPIForSequence(java.lang.String sequence, java.lang.String[] searchDatabases, java.lang.String taxonId, boolean onlyActive) throws java.rmi.RemoteException {\r
+ if (super.cachedEndpoint == null) {\r
+ throw new org.apache.axis.NoEndPointException();\r
+ }\r
+ org.apache.axis.client.Call _call = createCall();\r
+ _call.setOperation(_operations[0]);\r
+ _call.setUseSOAPAction(true);\r
+ _call.setSOAPActionURI("getUPIForSequence");\r
+ _call.setEncodingStyle(null);\r
+ _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR, Boolean.FALSE);\r
+ _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS, Boolean.FALSE);\r
+ _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);\r
+ _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getUPIForSequence"));\r
+\r
+ setRequestHeaders(_call);\r
+ setAttachments(_call);\r
+ java.lang.Object _resp = _call.invoke(new java.lang.Object[] {sequence, searchDatabases, taxonId, new java.lang.Boolean(onlyActive)});\r
+\r
+ if (_resp instanceof java.rmi.RemoteException) {\r
+ throw (java.rmi.RemoteException)_resp;\r
+ }\r
+ else {\r
+ extractAttachments(_call);\r
+ try {\r
+ return (uk.ac.ebi.picr.model.UPEntry) _resp;\r
+ } catch (java.lang.Exception _exception) {\r
+ return (uk.ac.ebi.picr.model.UPEntry) org.apache.axis.utils.JavaUtils.convert(_resp, uk.ac.ebi.picr.model.UPEntry.class);\r
+ }\r
+ }\r
+ }\r
+\r
+ public uk.ac.ebi.picr.model.UPEntry[] getUPIForAccession(java.lang.String accession, java.lang.String ac_version, java.lang.String[] searchDatabases, java.lang.String taxonId, boolean onlyActive) throws java.rmi.RemoteException {\r
+ if (super.cachedEndpoint == null) {\r
+ throw new org.apache.axis.NoEndPointException();\r
+ }\r
+ org.apache.axis.client.Call _call = createCall();\r
+ _call.setOperation(_operations[1]);\r
+ _call.setUseSOAPAction(true);\r
+ _call.setSOAPActionURI("getUPIForAccession");\r
+ _call.setEncodingStyle(null);\r
+ _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR, Boolean.FALSE);\r
+ _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS, Boolean.FALSE);\r
+ _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);\r
+ _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getUPIForAccession"));\r
+\r
+ setRequestHeaders(_call);\r
+ setAttachments(_call);\r
+ java.lang.Object _resp = _call.invoke(new java.lang.Object[] {accession, ac_version, searchDatabases, taxonId, new java.lang.Boolean(onlyActive)});\r
+\r
+ if (_resp instanceof java.rmi.RemoteException) {\r
+ throw (java.rmi.RemoteException)_resp;\r
+ }\r
+ else {\r
+ extractAttachments(_call);\r
+ try {\r
+ return (uk.ac.ebi.picr.model.UPEntry[]) _resp;\r
+ } catch (java.lang.Exception _exception) {\r
+ return (uk.ac.ebi.picr.model.UPEntry[]) org.apache.axis.utils.JavaUtils.convert(_resp, uk.ac.ebi.picr.model.UPEntry[].class);\r
+ }\r
+ }\r
+ }\r
+\r
+ public java.lang.String[] getMappedDatabaseNames() throws java.rmi.RemoteException {\r
+ if (super.cachedEndpoint == null) {\r
+ throw new org.apache.axis.NoEndPointException();\r
+ }\r
+ org.apache.axis.client.Call _call = createCall();\r
+ _call.setOperation(_operations[2]);\r
+ _call.setUseSOAPAction(true);\r
+ _call.setSOAPActionURI("getMappedDatabaseNames");\r
+ _call.setEncodingStyle(null);\r
+ _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR, Boolean.FALSE);\r
+ _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS, Boolean.FALSE);\r
+ _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);\r
+ _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getMappedDatabaseNames"));\r
+\r
+ setRequestHeaders(_call);\r
+ setAttachments(_call);\r
+ java.lang.Object _resp = _call.invoke(new java.lang.Object[] {});\r
+\r
+ if (_resp instanceof java.rmi.RemoteException) {\r
+ throw (java.rmi.RemoteException)_resp;\r
+ }\r
+ else {\r
+ extractAttachments(_call);\r
+ try {\r
+ return (java.lang.String[]) _resp;\r
+ } catch (java.lang.Exception _exception) {\r
+ return (java.lang.String[]) org.apache.axis.utils.JavaUtils.convert(_resp, java.lang.String[].class);\r
+ }\r
+ }\r
+ }\r
+\r
+}\r
git://source.jalview.org / jalview.git / blobdiff