JAL-2403 JAL-2416 pairwise score unexpected symbols as minimum matrix

[jalview.git] / test / jalview / analysis / AlignSeqTest.java

diff --git a/test/jalview/analysis/AlignSeqTest.java b/test/jalview/analysis/AlignSeqTest.java
index 85f619b..b9e866d 100644 (file)
--- a/test/jalview/analysis/AlignSeqTest.java
+++ b/test/jalview/analysis/AlignSeqTest.java
@@ -70,7 +70,7 @@ public class AlignSeqTest
   {
     AlignSeq as = new AlignSeq(new Sequence("s1", "PFY"), new Sequence(
             "s2", "RQW"), AlignSeq.PEP);
-    int[] expected = new int[] { 0, 0, 1, 1, 2, 2, 21, 21, 22, 22, -1, 24,
+    int[] expected = new int[] { 0, 0, 1, 1, 2, 2, 21, 21, 22, 22, -1, -1,
         -1, 23, -1 };
     String s = "aArRnNzZxX *.-?";
     assertArrayEquals(expected, as.indexEncode(s));