JAL-1645 source formatting and organise imports

[jalview.git] / test / jalview / analysis / CodingUtilsTest.java

diff --git a/test/jalview/analysis/CodingUtilsTest.java b/test/jalview/analysis/CodingUtilsTest.java
index 429c9ed..d29be9c 100644 (file)
--- a/test/jalview/analysis/CodingUtilsTest.java
+++ b/test/jalview/analysis/CodingUtilsTest.java
@@ -10,28 +10,28 @@ import org.testng.annotations.Test;
 public class CodingUtilsTest
 {
 
-  @Test(groups ={ "Functional" })
+  @Test(groups = { "Functional" })
   public void testDecodeCodon()
   {
-    assertTrue(Arrays.equals(new char[]
-    { 'A', 'A', 'A' }, CodingUtils.decodeCodon(0)));
-    assertTrue(Arrays.equals(new char[]
-    { 'A', 'A', 'C' }, CodingUtils.decodeCodon(1)));
-    assertTrue(Arrays.equals(new char[]
-    { 'A', 'A', 'G' }, CodingUtils.decodeCodon(2)));
-    assertTrue(Arrays.equals(new char[]
-    { 'A', 'A', 'T' }, CodingUtils.decodeCodon(3)));
-    assertTrue(Arrays.equals(new char[]
-    { 'A', 'C', 'A' }, CodingUtils.decodeCodon(4)));
-    assertTrue(Arrays.equals(new char[]
-    { 'C', 'A', 'A' }, CodingUtils.decodeCodon(16)));
-    assertTrue(Arrays.equals(new char[]
-    { 'G', 'G', 'G' }, CodingUtils.decodeCodon(42)));
-    assertTrue(Arrays.equals(new char[]
-    { 'T', 'T', 'T' }, CodingUtils.decodeCodon(63)));
+    assertTrue(Arrays.equals(new char[] { 'A', 'A', 'A' },
+            CodingUtils.decodeCodon(0)));
+    assertTrue(Arrays.equals(new char[] { 'A', 'A', 'C' },
+            CodingUtils.decodeCodon(1)));
+    assertTrue(Arrays.equals(new char[] { 'A', 'A', 'G' },
+            CodingUtils.decodeCodon(2)));
+    assertTrue(Arrays.equals(new char[] { 'A', 'A', 'T' },
+            CodingUtils.decodeCodon(3)));
+    assertTrue(Arrays.equals(new char[] { 'A', 'C', 'A' },
+            CodingUtils.decodeCodon(4)));
+    assertTrue(Arrays.equals(new char[] { 'C', 'A', 'A' },
+            CodingUtils.decodeCodon(16)));
+    assertTrue(Arrays.equals(new char[] { 'G', 'G', 'G' },
+            CodingUtils.decodeCodon(42)));
+    assertTrue(Arrays.equals(new char[] { 'T', 'T', 'T' },
+            CodingUtils.decodeCodon(63)));
   }
 
-  @Test(groups ={ "Functional" })
+  @Test(groups = { "Functional" })
   public void testDecodeNucleotide()
   {
     assertEquals('A', CodingUtils.decodeNucleotide(0));
@@ -41,7 +41,7 @@ public class CodingUtilsTest
     assertEquals('0', CodingUtils.decodeNucleotide(4));
   }
 
-  @Test(groups ={ "Functional" })
+  @Test(groups = { "Functional" })
   public void testEncodeCodon()
   {
     assertTrue(CodingUtils.encodeCodon('Z') < 0);
@@ -55,24 +55,16 @@ public class CodingUtilsTest
     assertEquals(3, CodingUtils.encodeCodon('T'));
     assertEquals(3, CodingUtils.encodeCodon('u'));
     assertEquals(3, CodingUtils.encodeCodon('U'));
-    
+
     assertEquals(-1, CodingUtils.encodeCodon(null));
-    assertEquals(0, CodingUtils.encodeCodon(new char[]
-    { 'A', 'A', 'A' }));
-    assertEquals(1, CodingUtils.encodeCodon(new char[]
-    { 'A', 'A', 'C' }));
-    assertEquals(2, CodingUtils.encodeCodon(new char[]
-    { 'A', 'A', 'G' }));
-    assertEquals(3, CodingUtils.encodeCodon(new char[]
-    { 'A', 'A', 'T' }));
-    assertEquals(4, CodingUtils.encodeCodon(new char[]
-    { 'A', 'C', 'A' }));
-    assertEquals(16, CodingUtils.encodeCodon(new char[]
-    { 'C', 'A', 'A' }));
-    assertEquals(42, CodingUtils.encodeCodon(new char[]
-    { 'G', 'G', 'G' }));
-    assertEquals(63, CodingUtils.encodeCodon(new char[]
-    { 'T', 'T', 'T' }));
+    assertEquals(0, CodingUtils.encodeCodon(new char[] { 'A', 'A', 'A' }));
+    assertEquals(1, CodingUtils.encodeCodon(new char[] { 'A', 'A', 'C' }));
+    assertEquals(2, CodingUtils.encodeCodon(new char[] { 'A', 'A', 'G' }));
+    assertEquals(3, CodingUtils.encodeCodon(new char[] { 'A', 'A', 'T' }));
+    assertEquals(4, CodingUtils.encodeCodon(new char[] { 'A', 'C', 'A' }));
+    assertEquals(16, CodingUtils.encodeCodon(new char[] { 'C', 'A', 'A' }));
+    assertEquals(42, CodingUtils.encodeCodon(new char[] { 'G', 'G', 'G' }));
+    assertEquals(63, CodingUtils.encodeCodon(new char[] { 'T', 'T', 'T' }));
   }
 
 }