JAL-1645 source formatting and organise imports

[jalview.git] / test / jalview / analysis / GroupingTest.java

diff --git a/test/jalview/analysis/GroupingTest.java b/test/jalview/analysis/GroupingTest.java
index 4698d0d..6ac3c8c 100644 (file)
--- a/test/jalview/analysis/GroupingTest.java
+++ b/test/jalview/analysis/GroupingTest.java
@@ -25,19 +25,18 @@ public class GroupingTest
 
   Sequence s5 = new Sequence("s5", "AAAADDEDTTEE");
 
-  SequenceGroup sg1 = new SequenceGroup(Arrays.asList(new SequenceI[]
-  { s1, s2 }), "Group1", null, false, false, false, 0, 5);
+  SequenceGroup sg1 = new SequenceGroup(Arrays.asList(new SequenceI[] { s1,
+      s2 }), "Group1", null, false, false, false, 0, 5);
 
-  SequenceGroup sg2 = new SequenceGroup(Arrays.asList(new SequenceI[]
-  { s3, s4, s5 }), "Group2", null, false, false, false, 0, 5);
+  SequenceGroup sg2 = new SequenceGroup(Arrays.asList(new SequenceI[] { s3,
+      s4, s5 }), "Group2", null, false, false, false, 0, 5);
 
-  AlignmentI alignment = new Alignment(new SequenceI[]
-  { s1, s2, s3, s4, s5 });
+  AlignmentI alignment = new Alignment(
+          new SequenceI[] { s1, s2, s3, s4, s5 });
 
-  int[] positions = new int[]
-  { 1, 7, 9 };
+  int[] positions = new int[] { 1, 7, 9 };
 
-  @Test(groups ={ "Functional" })
+  @Test(groups = { "Functional" })
   public void testMakeGroupsWithBoth()
   {
     ArrayList<String> str = new ArrayList<String>();
@@ -53,8 +52,7 @@ public class GroupingTest
     SequenceGroup[] seqgroupsString = Grouping.makeGroupsFrom(
             alignment.getSequencesArray(),
             str.toArray(new String[str.size()]),
-            Arrays.asList(new SequenceGroup[]
-            { sg1, sg2 }));
+            Arrays.asList(new SequenceGroup[] { sg1, sg2 }));
     ColumnSelection cs = new ColumnSelection();
     for (int p : positions)
     {
@@ -62,9 +60,9 @@ public class GroupingTest
     }
     SequenceGroup[] seqgroupsColSel = Grouping.makeGroupsFromCols(
             alignment.getSequencesArray(), cs,
-            Arrays.asList(new SequenceGroup[]
-            { sg1, sg2 }));
-    AssertJUnit.assertEquals(seqgroupsString.length, seqgroupsColSel.length);
+            Arrays.asList(new SequenceGroup[] { sg1, sg2 }));
+    AssertJUnit
+            .assertEquals(seqgroupsString.length, seqgroupsColSel.length);
     for (int p = 0; p < seqgroupsString.length; p++)
     {
       AssertJUnit.assertEquals(seqgroupsString[p].getName(),