JAL-629 Commands more objecty, less classy. FileLoader with sync option (or rather...

[jalview.git] / test / jalview / bin / CommandsTest.java

diff --git a/test/jalview/bin/CommandsTest.java b/test/jalview/bin/CommandsTest.java
index e4fea7b..65162f3 100644 (file)
--- a/test/jalview/bin/CommandsTest.java
+++ b/test/jalview/bin/CommandsTest.java
@@ -1,103 +1,86 @@
 package jalview.bin;
 
-import java.io.File;
-import java.io.IOException;
-import java.lang.management.ManagementFactory;
+import java.util.Date;
 
-import org.testng.annotations.BeforeTest;
+import org.testng.Assert;
+import org.testng.annotations.AfterMethod;
+import org.testng.annotations.BeforeClass;
+import org.testng.annotations.DataProvider;
 import org.testng.annotations.Test;
 
-import io.github.classgraph.ClassGraph;
+import jalview.gui.AlignFrame;
+import jalview.gui.Desktop;
+import jalview.gui.JvOptionPane;
 
+@Test(singleThreaded = true)
 public class CommandsTest
 {
-
-  private static final int SETUP_TIMEOUT = 30000;
-
-  private static class Worker extends Thread
+  @BeforeClass(alwaysRun = true)
+  public static void setUpBeforeClass() throws Exception
   {
-    private final Process process;
-
-    private Integer exit;
-
-    private Worker(Process process)
-    {
-      this.process = process;
-    }
-
-    @Override
-    public void run()
-    {
-      try
-      {
-        exit = process.waitFor();
-      } catch (InterruptedException ignore)
-      {
-        return;
-      }
-    }
+    Cache.loadProperties("test/jalview/gui/quitProps.jvprops");
+    Date oneHourFromNow = new Date(
+            System.currentTimeMillis() + 3600 * 1000);
+    Cache.setDateProperty("JALVIEW_NEWS_RSS_LASTMODIFIED", oneHourFromNow);
   }
 
-  private static ClassGraph scanner = null;
-
-  private static String classpath = null;
-
-  private static String modules = null;
-
-  private static String java_exe = null;
+  @BeforeClass(alwaysRun = true)
+  public void setUpJvOptionPane()
+  {
+    JvOptionPane.setInteractiveMode(false);
+    JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
+  }
 
-  public synchronized static String getClassPath()
+  @AfterMethod(alwaysRun = true)
+  public void tearDown()
   {
-    java_exe = System.getProperty("java.home") + File.separator + "bin"
-            + File.separator + "java";
-    classpath = ManagementFactory.getRuntimeMXBean().getClassPath();
-    return classpath;
+    Desktop.instance.closeAll_actionPerformed(null);
   }
 
-  private Worker getJalviewDesktopRunner(boolean withAwt, String cmd,
-          int timeout)
+  @Test(groups = "Functional", dataProvider = "cmdLines")
+  public void commandsOpenTest(String cmdLine, String sequence)
   {
-    // Note: JAL-3065 - don't include quotes for lib/* because the arguments are
-    // not expanded by the shell
-    String classpath = getClassPath();
-    String _cmd = java_exe + " "
-            + (withAwt ? "-Djava.awt.headless=true" : "") + " -classpath "
-            + classpath + " jalview.bin.Jalview ";
-    Process ls2_proc = null;
-    Worker worker = null;
-    try
+    String[] args = cmdLine.split("\\s+");
+    Jalview.main(args);
+    Commands cmds = Jalview.getInstance().getCommands();
+    Assert.assertNotNull(cmds);
+    Assert.assertTrue(cmds.commandArgsProvided(),
+            "Commands were not provided in the args");
+    Assert.assertTrue(cmds.argsWereParsed(),
+            "Overall command parse and operation is false");
+
+    if (sequence != null)
     {
-      ls2_proc = Runtime.getRuntime().exec(_cmd + cmd);
-    } catch (Throwable e1)
-    {
-      e1.printStackTrace();
+      Assert.assertTrue(lookForSequenceName(sequence),
+              "Sequence '" + sequence
+                      + "' was not found in opened alignment files: "
+                      + cmdLine);
     }
-    if (ls2_proc != null)
+
+    System.out.println("##### GOT TO END");
+  }
+
+  public static boolean lookForSequenceName(String sequenceName)
+  {
+    AlignFrame[] afs = Desktop.getAlignFrames();
+    for (AlignFrame af : afs)
     {
-      worker = new Worker(ls2_proc);
-      worker.start();
-      try
-      {
-        worker.join(timeout);
-      } catch (InterruptedException e)
+      for (String name : af.getViewport().getAlignment().getSequenceNames())
       {
-        System.err.println("Thread interrupted");
+        if (sequenceName.equals(name))
+        {
+          return true;
+        }
       }
     }
-    return worker;
-  }
-
-  @BeforeTest(alwaysRun = true)
-  public void initialize()
-  {
-    new CommandsTest();
+    return false;
   }
 
-  @Test(groups = "Functional")
-  public void setUpForHeadlessCommandsTest() throws IOException
+  @DataProvider(name = "cmdLines")
+  public Object[][] cmdLines()
   {
-    String cmds = "--open=./examples/uniref50.fa";
-    Worker worker = getJalviewDesktopRunner(true, cmds, SETUP_TIMEOUT);
+    return new Object[][] { { "--open=examples/uniref50.fa", "FER1_SPIOL" },
+        { "--argfile=test/jalview/bin/argparser/argfile0.txt", null } };
   }
 
 }