import static org.testng.AssertJUnit.assertTrue;
import jalview.analysis.AlignmentGenerator;
-import jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping;
import jalview.gui.JvOptionPane;
import jalview.io.DataSourceType;
import jalview.io.FileFormat;
{
for (AlignedCodonFrame alc : alignment.getCodonFrames())
{
- for (SequenceToSequenceMapping ssm : alc.getMappings())
+ for (SequenceMapping ssm : alc.getMappings())
{
if (ssm.getFromSeq().getDatasetSequence() != null)
{