assertEquals("Failed to recover ungapped sequence cigar operations",
"42M", cs_null);
testCigar_string(s_gapped, ex_cs_gapped);
- SeqCigar gen_sgapped = SeqCigar.parseCigar(s, ex_cs_gapped);
- assertEquals("Failed parseCigar", ex_cs_gapped,
- gen_sgapped.getCigarstring());
-
- testSeqRecovery(gen_sgapped, s_gapped);
/*
* Test dataset resolution