* @param ncl
* @param features
*/
- void testDelete_pseudoRandom(NCList<SequenceFeature> ncl,
+ protected void testDelete_pseudoRandom(NCList<SequenceFeature> ncl,
List<SequenceFeature> features)
{
int deleted = 0;
while (!features.isEmpty())
{
- assertEquals(ncl.getSize(), features.size());
+ assertEquals(ncl.size(), features.size());
int toDelete = random.nextInt(features.size());
SequenceFeature entry = features.get(toDelete);
String lastDeleted = "'" + entry.toString() + "'";
i, sf.toString(), lastDeleted));
}
}
- assertEquals(ncl.getSize(), 0); // all gone
+ assertEquals(ncl.size(), 0); // all gone
}
/**
* @param ncl
* @param features
*/
- void testAdd_pseudoRandom(Integer scale, NCList<SequenceFeature> ncl,
+ protected void testAdd_pseudoRandom(Integer scale,
+ NCList<SequenceFeature> ncl,
List<SequenceFeature> features)
{
int count = 0;
*/
assertTrue(ncl.isValid(),
String.format("Failed for scale = %d, i=%d", scale, i));
- assertEquals(ncl.getSize(), count);
+ assertEquals(ncl.size(), count);
}
// System.out.println(ncl.prettyPrint());
}
assertSame(features.getEntries().get(1), sf1);
assertTrue(features.delete(sf1)); // first match only is deleted
assertTrue(features.contains(sf1));
- assertEquals(features.getSize(), 1);
+ assertEquals(features.size(), 1);
assertTrue(features.delete(sf1));
assertTrue(features.getEntries().isEmpty());
}