@Test(groups = "Functional")
public void testGetSequencesForPdbs()
{
- assertNull(StructureViewer.getSequencesForPdbs(null, null));
+ StructureViewer sv = new StructureViewer(null);
+
+ assertNull(sv.getSequencesForPdbs(null, null));
PDBEntry pdbe1 = new PDBEntry("1A70", "A", Type.PDB, "path1");
PDBEntry pdbe2 = new PDBEntry("3A6S", "A", Type.PDB, "path2");
/*
* pdbe3/5/6 should get removed as having a duplicate file path
*/
- Map<PDBEntry, SequenceI[]> uniques = StructureViewer
- .getSequencesForPdbs(pdbs, seqs);
+ Map<PDBEntry, SequenceI[]> uniques = sv.getSequencesForPdbs(pdbs, seqs);
assertTrue(uniques.containsKey(pdbe1));
assertTrue(uniques.containsKey(pdbe2));
assertFalse(uniques.containsKey(pdbe3));