Merge branch 'Jalview-JS/jim/JAL-3253-JAL-3418' into Jalview-JS/JAL-3253-applet

[jalview.git] / test / jalview / io / IdentifyFileTest.java

diff --git a/test/jalview/io/IdentifyFileTest.java b/test/jalview/io/IdentifyFileTest.java
index 0a3ff94..5be7968 100644 (file)
--- a/test/jalview/io/IdentifyFileTest.java
+++ b/test/jalview/io/IdentifyFileTest.java
@@ -24,13 +24,23 @@ import static org.testng.AssertJUnit.assertFalse;
 import static org.testng.AssertJUnit.assertSame;
 import static org.testng.AssertJUnit.assertTrue;
 
+import jalview.gui.JvOptionPane;
+
 import org.testng.Assert;
+import org.testng.annotations.BeforeClass;
 import org.testng.annotations.DataProvider;
 import org.testng.annotations.Test;
 
 public class IdentifyFileTest
 {
 
+  @BeforeClass(alwaysRun = true)
+  public void setUpJvOptionPane()
+  {
+    JvOptionPane.setInteractiveMode(false);
+    JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
+  }
+
   @Test(groups = { "Functional" }, dataProvider = "identifyFiles")
   public void testIdentify(String data, FileFormatI expectedFileType)
           throws FileFormatException
@@ -84,7 +94,7 @@ public class IdentifyFileTest
         { "examples/plantfdx.fa", FileFormat.Fasta },
         { "examples/dna_interleaved.phy", FileFormat.Phylip },
         { "examples/2GIS.pdb", FileFormat.PDB },
-        { "examples/rf00031_folded.stk", FileFormat.Stockholm },
+        { "examples/RF00031_folded.stk", FileFormat.Stockholm },
         { "examples/testdata/test.rnaml", FileFormat.Rnaml },
         { "examples/testdata/test.aln", FileFormat.Clustal },
         { "examples/testdata/test.pfam", FileFormat.Pfam },
@@ -100,7 +110,8 @@ public class IdentifyFileTest
         {
             "examples/testdata/cullpdb_pc25_res3.0_R0.3_d150729_chains9361.fasta.15316",
             FileFormat.Fasta },
-
+        { "resources/scoreModel/pam250.scm", FileFormat.ScoreMatrix },
+        { "resources/scoreModel/blosum80.scm", FileFormat.ScoreMatrix }
     // { "examples/testdata/test.amsa", "AMSA" },
     // { "examples/test.jnet", "JnetFile" },
     };