--- /dev/null
+LOCUS NC_000011 1800 bp DNA linear CON 03-FEB-2014
+DEFINITION Homo sapiens chromosome 11, GRCh38 Primary Assembly.
+ACCESSION NC_000011 REGION: complement(5232829..5234628) GPC_000001303
+VERSION NC_000011.10 GI:568815587
+DBLINK BioProject: PRJNA168
+ Assembly: GCF_000001405.26
+KEYWORDS RefSeq.
+SOURCE Homo sapiens (human)
+ ORGANISM Homo sapiens
+ Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
+ Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
+ Catarrhini; Hominidae; Homo.
+REFERENCE 1 (bases 1 to 1800)
+ AUTHORS Taylor,T.D., Noguchi,H., Totoki,Y., Toyoda,A., Kuroki,Y., Dewar,K.,
+ Lloyd,C., Itoh,T., Takeda,T., Kim,D.W., She,X., Barlow,K.F.,
+ Bloom,T., Bruford,E., Chang,J.L., Cuomo,C.A., Eichler,E.,
+ FitzGerald,M.G., Jaffe,D.B., LaButti,K., Nicol,R., Park,H.S.,
+ Seaman,C., Sougnez,C., Yang,X., Zimmer,A.R., Zody,M.C.,
+ Birren,B.W., Nusbaum,C., Fujiyama,A., Hattori,M., Rogers,J.,
+ Lander,E.S. and Sakaki,Y.
+ TITLE Human chromosome 11 DNA sequence and analysis including novel gene identification
+ JOURNAL Nature 440 (7083), 497-500 (2006)
+ PUBMED 16554811
+REFERENCE 2 (bases 1 to 1800)
+ CONSRTM International Human Genome Sequencing Consortium
+ TITLE Finishing the euchromatic sequence of the human genome
+ JOURNAL Nature 431 (7011), 931-945 (2004)
+ PUBMED 15496913
+REFERENCE 3 (bases 1 to 1800)
+ AUTHORS Lander,E.S., Linton,L.M., Birren,B., Nusbaum,C., Zody,M.C.,
+ Baldwin,J., Devon,K., Dewar,K., Doyle,M., FitzHugh,W., Funke,R.,
+ Gage,D., Harris,K., Heaford,A., Howland,J., Kann,L., Lehoczky,J.,
+ LeVine,R., McEwan,P., McKernan,K., Meldrim,J., Mesirov,J.P.,
+ Miranda,C., Morris,W., Naylor,J., Raymond,C., Rosetti,M.,
+ Santos,R., Sheridan,A., Sougnez,C., Stange-Thomann,N.,
+ Stojanovic,N., Subramanian,A., Wyman,D., Rogers,J., Sulston,J.,
+ Ainscough,R., Beck,S., Bentley,D., Burton,J., Clee,C., Carter,N.,
+ Coulson,A., Deadman,R., Deloukas,P., Dunham,A., Dunham,I.,
+ Durbin,R., French,L., Grafham,D., Gregory,S., Hubbard,T.,
+ Humphray,S., Hunt,A., Jones,M., Lloyd,C., McMurray,A., Matthews,L.,
+ Mercer,S., Milne,S., Mullikin,J.C., Mungall,A., Plumb,R., Ross,M.,
+ Shownkeen,R., Sims,S., Waterston,R.H., Wilson,R.K., Hillier,L.W.,
+ McPherson,J.D., Marra,M.A., Mardis,E.R., Fulton,L.A.,
+ Chinwalla,A.T., Pepin,K.H., Gish,W.R., Chissoe,S.L., Wendl,M.C.,
+ Delehaunty,K.D., Miner,T.L., Delehaunty,A., Kramer,J.B., Cook,L.L.,
+ Fulton,R.S., Johnson,D.L., Minx,P.J., Clifton,S.W., Hawkins,T.,
+ Branscomb,E., Predki,P., Richardson,P., Wenning,S., Slezak,T.,
+ Doggett,N., Cheng,J.F., Olsen,A., Lucas,S., Elkin,C.,
+ Uberbacher,E., Frazier,M., Gibbs,R.A., Muzny,D.M., Scherer,S.E.,
+ Bouck,J.B., Sodergren,E.J., Worley,K.C., Rives,C.M., Gorrell,J.H.,
+ Metzker,M.L., Naylor,S.L., Kucherlapati,R.S., Nelson,D.L.,
+ Weinstock,G.M., Sakaki,Y., Fujiyama,A., Hattori,M., Yada,T.,
+ Toyoda,A., Itoh,T., Kawagoe,C., Watanabe,H., Totoki,Y., Taylor,T.,
+ Weissenbach,J., Heilig,R., Saurin,W., Artiguenave,F., Brottier,P.,
+ Bruls,T., Pelletier,E., Robert,C., Wincker,P., Smith,D.R.,
+ Doucette-Stamm,L., Rubenfield,M., Weinstock,K., Lee,H.M.,
+ Dubois,J., Rosenthal,A., Platzer,M., Nyakatura,G., Taudien,S.,
+ Rump,A., Yang,H., Yu,J., Wang,J., Huang,G., Gu,J., Hood,L.,
+ Rowen,L., Madan,A., Qin,S., Davis,R.W., Federspiel,N.A.,
+ Abola,A.P., Proctor,M.J., Myers,R.M., Schmutz,J., Dickson,M.,
+ Grimwood,J., Cox,D.R., Olson,M.V., Kaul,R., Raymond,C., Shimizu,N.,
+ Kawasaki,K., Minoshima,S., Evans,G.A., Athanasiou,M., Schultz,R.,
+ Roe,B.A., Chen,F., Pan,H., Ramser,J., Lehrach,H., Reinhardt,R.,
+ McCombie,W.R., de la Bastide,M., Dedhia,N., Blocker,H.,
+ Hornischer,K., Nordsiek,G., Agarwala,R., Aravind,L., Bailey,J.A.,
+ Bateman,A., Batzoglou,S., Birney,E., Bork,P., Brown,D.G.,
+ Burge,C.B., Cerutti,L., Chen,H.C., Church,D., Clamp,M.,
+ Copley,R.R., Doerks,T., Eddy,S.R., Eichler,E.E., Furey,T.S.,
+ Galagan,J., Gilbert,J.G., Harmon,C., Hayashizaki,Y., Haussler,D.,
+ Hermjakob,H., Hokamp,K., Jang,W., Johnson,L.S., Jones,T.A.,
+ Kasif,S., Kaspryzk,A., Kennedy,S., Kent,W.J., Kitts,P.,
+ Koonin,E.V., Korf,I., Kulp,D., Lancet,D., Lowe,T.M., McLysaght,A.,
+ Mikkelsen,T., Moran,J.V., Mulder,N., Pollara,V.J., Ponting,C.P.,
+ Schuler,G., Schultz,J., Slater,G., Smit,A.F., Stupka,E.,
+ Szustakowski,J., Thierry-Mieg,D., Thierry-Mieg,J., Wagner,L.,
+ Wallis,J., Wheeler,R., Williams,A., Wolf,Y.I., Wolfe,K.H.,
+ Yang,S.P., Yeh,R.F., Collins,F., Guyer,M.S., Peterson,J.,
+ Felsenfeld,A., Wetterstrand,K.A., Patrinos,A., Morgan,M.J., de
+ Jong,P., Catanese,J.J., Osoegawa,K., Shizuya,H., Choi,S. and
+ Chen,Y.J.
+ CONSRTM International Human Genome Sequencing Consortium
+ TITLE Initial sequencing and analysis of the human genome
+ JOURNAL Nature 409 (6822), 860-921 (2001)
+ PUBMED 11237011
+ REMARK Erratum:[Nature 2001 Aug 2;412(6846):565]
+COMMENT REFSEQ INFORMATION: The reference sequence is identical to
+ CM000673.2.
+ On Feb 3, 2014 this sequence version replaced gi:224589802.
+ Assembly Name: GRCh38 Primary Assembly
+ The DNA sequence is composed of genomic sequence, primarily
+ finished clones that were sequenced as part of the Human Genome
+ Project. PCR products and WGS shotgun sequence have been added
+ where necessary to fill gaps or correct errors. All such additions
+ are manually curated by GRC staff. For more information see:
+ http://genomereference.org.
+
+ ##Genome-Annotation-Data-START##
+ Annotation Provider :: NCBI
+ Annotation Status :: Full annotation
+ Annotation Version :: Homo sapiens Annotation Release 106
+ Annotation Pipeline :: NCBI eukaryotic genome annotation
+ pipeline
+ Annotation Software Version :: 5.2
+ Annotation Method :: Best-placed RefSeq; Gnomon
+ Features Annotated :: Gene; mRNA; CDS; ncRNA
+ ##Genome-Annotation-Data-END##
+FEATURES Location/Qualifiers
+ source 1..1800
+ /organism="Homo sapiens"
+ /mol_type="genomic DNA"
+ /db_xref="taxon:9606"
+ /chromosome="11"
+ gene 1..1800
+ /gene="HBD"
+ /note="hemoglobin, delta; Derived by automated computational analysis using gene prediction method: Curated Genomic."
+ /db_xref="GeneID:3045"
+ /db_xref="HGNC:4829"
+ /db_xref="MIM:142000"
+ mRNA join(1..287,416..638,1537..1800)
+ /gene="HBD"
+ /product="hemoglobin, delta"
+ /note="Derived by automated computational analysis using gene prediction method: Curated Genomic."
+ /transcript_id="NM_000519.3"
+ /db_xref="GI:62865863"
+ /db_xref="GeneID:3045"
+ /db_xref="HGNC:4829"
+ /db_xref="MIM:142000"
+ CDS join(196..287,416..638,1537..1665)
+ /gene="HBD"
+ /note="delta globin; delta-globin chain; hemoglobin delta chain; Derived by automated computational analysis using gene prediction method: Curated Genomic."
+ /codon_start=1
+ /product="hemoglobin subunit delta"
+ /protein_id="NP_000510.1"
+ /db_xref="GI:4504351"
+ /db_xref="CCDS:CCDS31376.1"
+ /db_xref="GeneID:3045"
+ /db_xref="HGNC:4829"
+ /db_xref="MIM:142000"
+ /translation="MVHLTPEEKTAVNALWGKVNVDAVGGEALGRLLVVYPWTQRFFE
+ SFGDLSSPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFSQLSELHCDKLHVDPE
+ NFRLLGNVLVCVLARNFGKEFTPQMQAAYQKVVAGVANALAHKYH"
+ORIGIN
+ 1 agggcaagtt aagggaatag tggaatgaag gttcattttt cattctcaca aactaatgaa
+ 61 accctgctta tcttaaacca acctgctcac tggagcaggg aggacaggac cagcataaaa
+ 121 ggcagggcag agtcgactgt tgcttacact ttcttctgac ataacagtgt tcactagcaa
+ 181 cctcaaacag acaccatggt gcatctgact cctgaggaga agactgctgt caatgccctg
+ 241 tggggcaaag tgaacgtgga tgcagttggt ggtgaggccc tgggcaggtt ggtatcaagg
+ 301 ttataagaga ggctcaagga ggcaaatgga aactgggcat gtgtagacag agaagactct
+ 361 tgggtttctg ataggcactg actctctgtc ccttgggctg ttttcctacc ctcagattac
+ 421 tggtggtcta cccttggacc cagaggttct ttgagtcctt tggggatctg tcctctcctg
+ 481 atgctgttat gggcaaccct aaggtgaagg ctcatggcaa gaaggtgcta ggtgccttta
+ 541 gtgatggcct ggctcacctg gacaacctca agggcacttt ttctcagctg agtgagctgc
+ 601 actgtgacaa gctgcacgtg gatcctgaga acttcagggt gagtccagga gatgcttcac
+ 661 ttttctcttt ttactttcta atcttacatt ttggttcttt tacctacctg ctcttctccc
+ 721 acatttttgt cattttacta tattttatca tttaatgctt ctaaaatttt gttaattttt
+ 781 tatttaaata ttctgcattt tttccttcct cacaatcttg ctattttaaa ttatttaata
+ 841 tcctgtcttt ctctcccaac cccctccctt catttttcct tctctaacaa caactcaaat
+ 901 tatgcatacc agctctcacc tgctaattct gcacttagaa taatcctttt gtctctccac
+ 961 atgggtatgg gagaggctcc aactcaaaga tgagaggcat agaatactgt tttagaggct
+ 1021 ataaatcatt ttacaataag gaataattgg aattttataa attctgtagt aaatggaatg
+ 1081 gaaaggaaag tgaatatttg attatgaaag actaggcagt tacactggag gtggggcaga
+ 1141 agtcgttgct aggagacagc ccatcatcac actgattaat caattaattt gtatctatta
+ 1201 atctgtttat agtaattaat ttgtatatgc tatatacaca tacaaaatta aaactaattt
+ 1261 ggaattaatt tgtatatagt attatacagc atatatagca tatatgtaca tatatagact
+ 1321 acatgctagt taagtacata gaggatgtgt gtgtatagat atatgttata tgtatgcatt
+ 1381 catatatgta cttatttatg ctgatgggaa taacctgggg atcagttttg tctaagattt
+ 1441 gggcagaaaa aaatgggtgt tggctcagtt tctcagaagc cagtctttat ttctctgtta
+ 1501 accatatgca tgtatctgcc tacctcttct ccgcagctct tgggcaatgt gctggtgtgt
+ 1561 gtgctggccc gcaactttgg caaggaattc accccacaaa tgcaggctgc ctatcagaag
+ 1621 gtggtggctg gtgtggctaa tgccctggct cacaagtacc attgagatcc tggactgttt
+ 1681 cctgataacc ataagaagac cctatttccc tagattctat tttctgaact tgggaacaca
+ 1741 atgcctactt caagggtatg gcttctgcct aataaagaat gttcagctca acttcctgat
+//
\ No newline at end of file
git://source.jalview.org / jalview.git / blobdiff