JAL-3251 SequenceToSequenceMapping now SequenceMapping, MappingType++

[jalview.git] / test / jalview / io / gff / ExonerateHelperTest.java

diff --git a/test/jalview/io/gff/ExonerateHelperTest.java b/test/jalview/io/gff/ExonerateHelperTest.java
index 825af24..940859c 100644 (file)
--- a/test/jalview/io/gff/ExonerateHelperTest.java
+++ b/test/jalview/io/gff/ExonerateHelperTest.java
@@ -62,20 +62,20 @@ public class ExonerateHelperTest
   public void testGetMappingType()
   {
     // protein-to-dna:
-    assertSame(MappingType.PeptideToNucleotide,
+    assertSame(MappingType.PeptideToGenome,
             ExonerateHelper
                     .getMappingType("exonerate:protein2genome:local"));
-    assertSame(MappingType.PeptideToNucleotide,
+    assertSame(MappingType.PeptideToGenome,
             ExonerateHelper.getMappingType("exonerate:protein2dna:local"));
 
     // dna-to-dna:
-    assertSame(MappingType.NucleotideToNucleotide,
+    assertSame(MappingType.GenomeToCdna,
             ExonerateHelper.getMappingType("coding2coding"));
-    assertSame(MappingType.NucleotideToNucleotide,
+    assertSame(MappingType.GenomeToCdna,
             ExonerateHelper.getMappingType("coding2genome"));
-    assertSame(MappingType.NucleotideToNucleotide,
+    assertSame(MappingType.GenomeToCdna,
             ExonerateHelper.getMappingType("cdna2genome"));
-    assertSame(MappingType.NucleotideToNucleotide,
+    assertSame(MappingType.GenomeToCdna,
             ExonerateHelper.getMappingType("genome2genome"));
     assertNull(ExonerateHelper.getMappingType("affine:local"));
   }