Merge branch 'feature/JAL-3187linkedFeatures' into feature/JAL-3251biotypedMappings

[jalview.git] / test / jalview / schemes / DnaCodonTests.java

diff --git a/test/jalview/schemes/DnaCodonTests.java b/test/jalview/schemes/DnaCodonTests.java
deleted file mode 100644 (file)
index 908d07b..0000000
--- a/test/jalview/schemes/DnaCodonTests.java
+++ /dev/null
@@ -1,68 +0,0 @@
-/*
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
- * 
- * This file is part of Jalview.
- * 
- * Jalview is free software: you can redistribute it and/or
- * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3
- * of the License, or (at your option) any later version.
- *  
- * Jalview is distributed in the hope that it will be useful, but 
- * WITHOUT ANY WARRANTY; without even the implied warranty 
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
- * PURPOSE.  See the GNU General Public License for more details.
- * 
- * You should have received a copy of the GNU General Public License
- * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
- * The Jalview Authors are detailed in the 'AUTHORS' file.
- */
-package jalview.schemes;
-
-import static org.testng.AssertJUnit.assertTrue;
-
-import jalview.gui.JvOptionPane;
-
-import java.util.Map;
-
-import org.testng.annotations.BeforeClass;
-import org.testng.annotations.Test;
-
-public class DnaCodonTests
-{
-
-  @BeforeClass(alwaysRun = true)
-  public void setUpJvOptionPane()
-  {
-    JvOptionPane.setInteractiveMode(false);
-    JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
-  }
-
-  @Test(groups = { "Functional" })
-  public void testAmbiguityCodeGeneration()
-  {
-    assertTrue(ResidueProperties.ambiguityCodes.size() > 0);
-  }
-
-  @Test(groups = { "Functional" })
-  public void testAmbiguityCodon()
-  {
-    for (String ac : ResidueProperties.ambiguityCodes.keySet())
-    {
-      assertTrue("Couldn't resolve GGN as glycine codon",
-              ResidueProperties.codonHash2.get("GG" + ac).equals("G"));
-    }
-  }
-
-  @Test(groups = { "Functional" })
-  public void regenerateCodonTable()
-  {
-    for (Map.Entry<String, String> codon : ResidueProperties.codonHash2
-            .entrySet())
-    {
-      System.out.println("ResidueProperties.codonHash2.set(\""
-              + codon.getKey() + "\", \"" + codon.getValue() + "\");");
-    }
-  }
-}