{
private StructureSelectionManager ssm;
- @BeforeMethod(alwaysRun = true)
+ @BeforeMethod(alwaysRun = true)
public void setUp()
{
ssm = new StructureSelectionManager();
}
- @Test(groups ={ "Functional" })
+ @Test(groups = { "Functional" })
public void testRegisterMapping()
{
AlignedCodonFrame acf1 = new AlignedCodonFrame();
assertTrue(ssm.seqmappings.contains(acf2));
}
- @Test(groups ={ "Functional" })
+ @Test(groups = { "Functional" })
public void testRegisterMappings()
{
AlignedCodonFrame acf1 = new AlignedCodonFrame();
sm.setProcessSecondaryStructure(true);
sm.setAddTempFacAnnot(true);
PDBfile pmap = sm.setMapping(true, new SequenceI[] { seq },
- new String[] { null }, "examples/1gaq.txt",
- FormatAdapter.FILE);
+ new String[] { null }, "examples/1gaq.txt", FormatAdapter.FILE);
assertTrue(pmap != null);
assertEquals(3, pmap.getSeqs().size());