JAL-2114 accept "<123..178" or "123..>178" format

[jalview.git] / test / jalview / util / DnaUtilsTest.java

diff --git a/test/jalview/util/DnaUtilsTest.java b/test/jalview/util/DnaUtilsTest.java
index 9e978fe..bb3cc5b 100644 (file)
--- a/test/jalview/util/DnaUtilsTest.java
+++ b/test/jalview/util/DnaUtilsTest.java
@@ -89,10 +89,20 @@ public class DnaUtilsTest
     assertEquals(87064, ranges.get(1)[1]);
 
     /*
+     * beyond 5' or 3' locus
+     */
+    ranges = DnaUtils.parseLocation("<34..126");
+    assertEquals(1, ranges.size());
+    assertEquals(34, ranges.get(0)[0]);
+    assertEquals(126, ranges.get(0)[1]);
+    ranges = DnaUtils.parseLocation("35..>127");
+    assertEquals(1, ranges.size());
+    assertEquals(35, ranges.get(0)[0]);
+    assertEquals(127, ranges.get(0)[1]);
+
+    /*
      * valid things we don't yet handle
      */
-    assertNull(DnaUtils.parseLocation("<34..126"));
-    assertNull(DnaUtils.parseLocation("34..>126"));
     assertNull(DnaUtils.parseLocation("34.126"));
     assertNull(DnaUtils.parseLocation("34^126"));
     assertNull(DnaUtils.parseLocation("order(34..126,130..180)"));