--- /dev/null
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
+package jalview.util;
+
+import java.io.File;
+import java.util.List;
+
+import org.testng.Assert;
+import org.testng.annotations.DataProvider;
+import org.testng.annotations.Test;
+
+@Test
+public class FileUtilsTest
+{
+ @Test(groups = "Functional", dataProvider = "patternsAndMinNumFiles")
+ public void testJavaFileGlob(String pattern, int atLeast, int atMost)
+ {
+ List<File> files = FileUtils.getFilesFromGlob(pattern);
+ if (atLeast != -1)
+ {
+ Assert.assertTrue(files.size() > atLeast,
+ "Did not find more than " + atLeast + " files with " + pattern
+ + " (found " + files.size() + ")");
+ }
+ if (atLeast != -1)
+ {
+ Assert.assertTrue(files.size() > atLeast,
+ "Did not find more than " + atLeast + " files with " + pattern
+ + " (found " + files.size() + ")");
+ }
+ if (atMost != -1)
+ {
+ Assert.assertTrue(files.size() < atMost,
+ "Did not find fewer than " + atMost + " files with " + pattern
+ + " (found " + files.size() + ")");
+ }
+ }
+
+ @Test(groups = "Functional", dataProvider = "dirnamesAndBasenames")
+ public void testDirnamesAndBasenames(String filename, String dirname,
+ String endsWith, String basename, String notInDirname)
+ {
+ File file = new File(filename);
+ String d = FileUtils.getDirname(file);
+ String b = FileUtils.getBasename(file);
+ Assert.assertEquals(b, basename);
+ Assert.assertTrue(d.startsWith(dirname), "getDirname(" + file.getPath()
+ + ")=" + d + " didn't start with '" + dirname + "'");
+ Assert.assertTrue(d.endsWith(endsWith), "getDirname(" + file.getPath()
+ + ")=" + d + " didn't end with '" + endsWith + "'");
+
+ // ensure dirname doesn't end with basename (which means you can't use same
+ // filename as dir in tests!)
+ Assert.assertFalse(d.endsWith(b), "Processed dirname '" + d
+ + "' ends with '" + b + "' when it shouldn't");
+
+ if (notInDirname != null)
+ Assert.assertFalse(d.contains(notInDirname), "Processed directory '"
+ + d + "' contains '" + notInDirname + "' when it shouldn't");
+ }
+
+ @DataProvider(name = "patternsAndMinNumFiles")
+ public Object[][] patternsAndMinNumFiles()
+ {
+ return new Object[][] { { "src/**/*.java", 900, 100000 },
+ { "src/**.java", 900, 100000 },
+ { "test/**/*.java", 250, 2500 },
+ { "test/**.java", 250, 2500 },
+ { "help/**/*.html", 100, 1000 },
+ { "test/**/F*.java", 15, 150 },
+ { "test/jalview/*/F*.java", 10, 15 }, // 12 at time of writing
+ { "test/jalview/**/F*.java", 18, 30 }, // 20 at time of writing
+ { "test/jalview/util/F**.java", 1, 5 }, // 2 at time of writing
+ { "src/jalview/b*/*.java", 14, 19 }, // 15 at time of writing
+ { "src/jalview/b**/*.java", 20, 25 }, // 22 at time of writing
+ };
+ }
+
+ @DataProvider(name = "dirnamesAndBasenames")
+ public Object[][] dirnamesAndBasenames()
+ {
+ String homeDir = new File(System.getProperty("user.home")).getPath();
+ return new Object[][] { // -1=startsWith, 0=equals, 1=endsWith
+ { "~/hello/sailor", homeDir, "/hello", "sailor", "~" }, //
+ { "./examples/uniref50.fa", "./", "examples", "uniref50", "Users" }, //
+ { "./examples/uniref50.1.fa", "./", "examples", "uniref50.1",
+ "Users" }, //
+ { "examples/uniref50.fa", "examples", "examples", "uniref50",
+ ".fa" }, //
+ };
+ }
+
+ @Test(groups = "Functional", dataProvider = "convertWildcardsToPathData")
+ public void convertWildcardsToPathTest(String value, String wildcard,
+ String dirname, String basename, String path)
+ {
+
+ Assert.assertEquals(
+ FileUtils.convertWildcardsToPath(value, wildcard, dirname,
+ basename),
+ path, "Conversion of wildcard output path is not right.");
+
+ }
+
+ @DataProvider(name = "convertWildcardsToPathData")
+ public Object[][] convertWildcardsToPathData()
+ {
+ return new Object[][] {
+ /*
+ * cmdline args
+ * Arg (null if only testing headless)
+ * String value if there is one (null otherwise)
+ * boolean value if String value is null
+ * expected value of isHeadless()
+ */
+ /*
+ */
+ { "*/*", "*", "{dirname}", "{basename}", "{dirname}/{basename}" },
+ { "*/", "*", "{dirname}", "{basename}", "{dirname}/" },
+ { "/*", "*", "{dirname}", "{basename}", "/{basename}" },
+ { "*", "*", "{dirname}", "{basename}", "{basename}" },
+ { "tmp/output/*/file-*.stk", "*", "{dirname}", "{basename}",
+ "tmp/output/{dirname}/file-{basename}.stk" },
+ { "/*.file", "*", "{dirname}", "{basename}", "/{basename}.file" },
+ { "*/file.stk", "*", "{dirname}", "{basename}",
+ "{dirname}/file.stk" },
+ { "tmp/abc*def/file.stk", "*", "{dirname}", "{basename}",
+ "tmp/abc{dirname}def/file.stk" },
+ { "a*b/c*d", "*", "{dirname}", "{basename}",
+ "a{dirname}b/c{basename}d" },
+ { "a*b/c", "*", "{dirname}", "{basename}", "a{dirname}b/c" },
+ { "a/b*c", "*", "{dirname}", "{basename}", "a/b{basename}c" },
+ { "a*b", "*", "{dirname}", "{basename}", "a{basename}b" },
+ { "aSTARb/cSTARd", "STAR", "BEFORE", "AFTER", "aBEFOREb/cAFTERd" },
+ { "aSTARb/c", "STAR", "BEFORE", "AFTER", "aBEFOREb/c" },
+ { "a/bSTARc", "STAR", "BEFORE", "AFTER", "a/bAFTERc" },
+ { "aSTARb", "STAR", "BEFORE", "AFTER", "aAFTERb" },
+ //
+ };
+ }
+
+}
git://source.jalview.org / jalview.git / blobdiff