JAL-1805 test envirionment separation

[jalview.git] / test / jalview / util / MappingUtilsTest.java

diff --git a/test/jalview/util/MappingUtilsTest.java b/test/jalview/util/MappingUtilsTest.java
index 9985fb3..2c0045b 100644 (file)
--- a/test/jalview/util/MappingUtilsTest.java
+++ b/test/jalview/util/MappingUtilsTest.java
@@ -36,7 +36,7 @@ public class MappingUtilsTest
   /**
    * Simple test of mapping with no intron involved.
    */
-  @Test
+  @Test(groups ={ "Functional" })
   public void testBuildSearchResults()
   {
     final Sequence seq1 = new Sequence("Seq1", "C-G-TA-GC");
@@ -89,7 +89,7 @@ public class MappingUtilsTest
   /**
    * Simple test of mapping with introns involved.
    */
-  @Test
+  @Test(groups ={ "Functional" })
   public void testBuildSearchResults_withIntron()
   {
     final Sequence seq1 = new Sequence("Seq1", "C-G-TAGA-GCAGCTT");
@@ -166,7 +166,7 @@ public class MappingUtilsTest
    * 
    * @throws IOException
    */
-  @Test
+  @Test(groups ={ "Functional" })
   public void testMapSequenceGroup_sequences() throws IOException
   {
     /*
@@ -259,7 +259,7 @@ public class MappingUtilsTest
    * 
    * @throws IOException
    */
-  @Test
+  @Test(groups ={ "Functional" })
   public void testMapColumnSelection_proteinToDna() throws IOException
   {
     setupMappedAlignments();
@@ -357,7 +357,7 @@ public class MappingUtilsTest
    * 
    * @throws IOException
    */
-  @Test
+  @Test(groups ={ "Functional" })
   public void testMapColumnSelection_dnaToProtein() throws IOException
   {
     setupMappedAlignments();
@@ -384,7 +384,7 @@ public class MappingUtilsTest
     assertEquals("[0, 1, 3]", cs.getSelected().toString());
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void testMapColumnSelection_null() throws IOException
   {
     setupMappedAlignments();
@@ -397,7 +397,7 @@ public class MappingUtilsTest
    * Tests for the method that converts a series of [start, end] ranges to
    * single positions
    */
-  @Test
+  @Test(groups ={ "Functional" })
   public void testFlattenRanges()
   {
     assertEquals("[1, 2, 3, 4]",
@@ -423,7 +423,7 @@ public class MappingUtilsTest
    * 
    * @throws IOException
    */
-  @Test
+  @Test(groups ={ "Functional" })
   public void testMapSequenceGroup_columns() throws IOException
   {
     /*
@@ -506,7 +506,7 @@ public class MappingUtilsTest
    * 
    * @throws IOException
    */
-  @Test
+  @Test(groups ={ "Functional" })
   public void testMapSequenceGroup_region() throws IOException
   {
     /*
@@ -600,7 +600,7 @@ public class MappingUtilsTest
     assertEquals(4, mappedGroup.getEndRes());
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void testFindMappingsForSequence()
   {
     SequenceI seq1 = new Sequence("Seq1", "ABC");