Vector<UniprotEntry> entries = u.getUniprotEntries(reader);
UniprotEntry entry = entries.get(0);
- // source + accession ids + names + protein names
- String expectedName = ">UniProt/Swiss-Prot|A9CKP4|A9CKP5|A9CKP4_AGRT5|A9CKP4_AGRT6 Mitogen-activated protein kinase 13 Henry";
- assertEquals(expectedName, Uniprot.constructSequenceFastaHeader(entry)
- .toString());
+ // source + accession ids + names
+ String expectedName = "UniProt/Swiss-Prot|A9CKP4|A9CKP5|A9CKP4_AGRT5|A9CKP4_AGRT6";
+ // protein names
+ String expectedDescription = "Mitogen-activated protein kinase 13 Henry ";
+
+ assertEquals(expectedName, Uniprot.getUniprotEntryId(entry));
+ assertEquals(expectedDescription,
+ Uniprot.getUniprotEntryDescription(entry));
}
}