Add testing dirs

[proteocache.git] / testsrc / compbio / stat / collector / TestInputFilter.java

diff --git a/testsrc/compbio/stat/collector/TestInputFilter.java b/testsrc/compbio/stat/collector/TestInputFilter.java
new file mode 100644 (file)
index 0000000..23203e1
--- /dev/null
+++ b/testsrc/compbio/stat/collector/TestInputFilter.java
@@ -0,0 +1,40 @@
+package compbio.stat.collector;\r
+\r
+import java.io.File;\r
+import java.io.IOException;\r
+\r
+import org.testng.Assert;\r
+import org.testng.annotations.Test;\r
+\r
+import compbio.metadata.AllTestSuit;\r
+\r
+public class TestInputFilter {\r
+\r
+       final static String FASTA_INPUT = AllTestSuit.TEST_DATA_PATH_ABSOLUTE\r
+                       + "TO1381.fasta";\r
+       final static String ALN_INPUT = AllTestSuit.TEST_DATA_PATH_ABSOLUTE\r
+                       + "TO1381L.aln";\r
+       final static String TEST_FASTA_INPUT = AllTestSuit.TEST_DATA_PATH_ABSOLUTE\r
+                       + "test_input.fasta";\r
+       final static String TEST_ALIGNMENT_INPUT = AllTestSuit.TEST_DATA_PATH_ABSOLUTE\r
+                       + "test_input.aln";\r
+       @Test\r
+       public void TestInputFilter() {\r
+               InputFilter ifilter = new InputFilter();\r
+               try {\r
+                       // Makes sure real files are accepted\r
+                       Assert.assertTrue(ifilter.accept(new File(FASTA_INPUT)));\r
+                       Assert.assertTrue(ifilter.accept(new File(ALN_INPUT)));\r
+\r
+                       // .. and test files are not\r
+                       Assert.assertFalse(ifilter.accept(new File(TEST_ALIGNMENT_INPUT)));\r
+                       Assert.assertFalse(ifilter.accept(new File(TEST_FASTA_INPUT)));\r
+                       // does not matter if the file is empty, it is still not a test\r
+                       // file!\r
+                       Assert.assertTrue(ifilter.accept(File.createTempFile("aaa", "bbb")));\r
+               } catch (IOException e) {\r
+                       e.printStackTrace();\r
+                       Assert.fail(e.getMessage());\r
+               }\r
+       }\r
+}\r