-/*
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
- *
- * This file is part of Jalview.
- *
- * Jalview is free software: you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3
- * of the License, or (at your option) any later version.
- *
- * Jalview is distributed in the hope that it will be useful, but
- * WITHOUT ANY WARRANTY; without even the implied warranty
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
- * PURPOSE. See the GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
- * The Jalview Authors are detailed in the 'AUTHORS' file.
- */
-package jalview.appletgui;
-
-import jalview.datamodel.ColumnSelection;
-import jalview.datamodel.SequenceGroup;
-import jalview.util.MessageManager;
-
-import java.awt.Color;
-import java.awt.FontMetrics;
-import java.awt.Graphics;
-import java.awt.event.ActionEvent;
-import java.awt.event.ActionListener;
-import java.awt.event.InputEvent;
-import java.awt.event.MouseEvent;
-import java.awt.event.MouseListener;
-import java.awt.event.MouseMotionListener;
-
-import javax.swing.JMenuItem;
-import javax.swing.JPanel;
-import javax.swing.JPopupMenu;
-
-public class ScalePanel extends JPanel implements MouseMotionListener,
- MouseListener
-{
-
- protected int offy = 4;
-
- public int width;
-
- protected AlignViewport av;
-
- AlignmentPanel ap;
-
- boolean stretchingGroup = false;
-
- int min; // used by mouseDragged to see if user
-
- int max; // used by mouseDragged to see if user
-
- boolean mouseDragging = false;
-
- int[] reveal;
-
- public ScalePanel(AlignViewport av, AlignmentPanel ap)
- {
- setLayout(null);
- this.av = av;
- this.ap = ap;
-
- addMouseListener(this);
- addMouseMotionListener(this);
-
- }
-
- public void mousePressed(MouseEvent evt)
- {
- int x = (evt.getX() / av.getCharWidth()) + av.getStartRes();
- final int res;
-
- if (av.hasHiddenColumns())
- {
- res = av.getColumnSelection().adjustForHiddenColumns(x);
- }
- else
- {
- res = x;
- }
-
- min = res;
- max = res;
- if ((evt.getModifiers() & InputEvent.BUTTON3_MASK) == InputEvent.BUTTON3_MASK)
- {
- JPopupMenu pop = new JPopupMenu();
- if (reveal != null)
- {
- JMenuItem item = new JMenuItem(
- MessageManager.getString("label.reveal"));
- item.addActionListener(new ActionListener()
- {
- public void actionPerformed(ActionEvent e)
- {
- av.showColumn(reveal[0]);
- reveal = null;
- ap.paintAlignment(true);
- if (ap.overviewPanel != null)
- {
- ap.overviewPanel.updateOverviewImage();
- }
- }
- });
- pop.add(item);
-
- if (av.getColumnSelection().hasManyHiddenColumns())
- {
- item = new JMenuItem(MessageManager.getString("action.reveal_all"));
- item.addActionListener(new ActionListener()
- {
- public void actionPerformed(ActionEvent e)
- {
- av.showAllHiddenColumns();
- reveal = null;
- ap.paintAlignment(true);
- if (ap.overviewPanel != null)
- {
- ap.overviewPanel.updateOverviewImage();
- }
- }
- });
- pop.add(item);
- }
- this.add(pop);
- pop.show(this, evt.getX(), evt.getY());
- }
- else if (av.getColumnSelection().contains(res))
- {
- JMenuItem item = new JMenuItem(
- MessageManager.getString("label.hide_columns"));
- item.addActionListener(new ActionListener()
- {
- public void actionPerformed(ActionEvent e)
- {
- av.hideColumns(res, res);
- if (av.getSelectionGroup() != null
- && av.getSelectionGroup().getSize() == av
- .getAlignment().getHeight())
- {
- av.setSelectionGroup(null);
- }
-
- ap.paintAlignment(true);
- if (ap.overviewPanel != null)
- {
- ap.overviewPanel.updateOverviewImage();
- }
- }
- });
- pop.add(item);
- this.add(pop);
- pop.show(this, evt.getX(), evt.getY());
- }
- }
- else
- // LEFT MOUSE TO SELECT
- {
- if (!evt.isControlDown() && !evt.isShiftDown())
- {
- av.getColumnSelection().clear();
- }
-
- av.getColumnSelection().addElement(res);
- SequenceGroup sg = new SequenceGroup();
- for (int i = 0; i < av.getAlignment().getSequences().size(); i++)
- {
- sg.addSequence(av.getAlignment().getSequenceAt(i), false);
- }
-
- sg.setStartRes(res);
- sg.setEndRes(res);
- av.setSelectionGroup(sg);
-
- if (evt.isShiftDown())
- {
- int min = Math.min(av.getColumnSelection().getMin(), res);
- int max = Math.max(av.getColumnSelection().getMax(), res);
- for (int i = min; i < max; i++)
- {
- av.getColumnSelection().addElement(i);
- }
- sg.setStartRes(min);
- sg.setEndRes(max);
- }
- }
-
- ap.paintAlignment(true);
- av.sendSelection();
- }
-
- public void mouseReleased(MouseEvent evt)
- {
- mouseDragging = false;
-
- int res = (evt.getX() / av.getCharWidth()) + av.getStartRes();
-
- if (res > av.getAlignment().getWidth())
- {
- res = av.getAlignment().getWidth() - 1;
- }
-
- if (av.hasHiddenColumns())
- {
- res = av.getColumnSelection().adjustForHiddenColumns(res);
- }
-
- if (!stretchingGroup)
- {
- ap.paintAlignment(false);
-
- return;
- }
-
- SequenceGroup sg = av.getSelectionGroup();
-
- if (res > sg.getStartRes())
- {
- sg.setEndRes(res);
- }
- else if (res < sg.getStartRes())
- {
- sg.setStartRes(res);
- }
-
- stretchingGroup = false;
- ap.paintAlignment(false);
- av.sendSelection();
- }
-
- public void mouseDragged(MouseEvent evt)
- {
- mouseDragging = true;
-
- int res = (evt.getX() / av.getCharWidth()) + av.getStartRes();
- if (res < 0)
- {
- res = 0;
- }
-
- if (av.hasHiddenColumns())
- {
- res = av.getColumnSelection().adjustForHiddenColumns(res);
- }
-
- if (res > av.getAlignment().getWidth())
- {
- res = av.getAlignment().getWidth() - 1;
- }
-
- if (res < min)
- {
- min = res;
- }
-
- if (res > max)
- {
- max = res;
- }
-
- SequenceGroup sg = av.getSelectionGroup();
-
- if (sg != null)
- {
- stretchingGroup = true;
-
- if (!av.getColumnSelection().contains(res))
- {
- av.getColumnSelection().addElement(res);
- }
-
- if (res > sg.getStartRes())
- {
- sg.setEndRes(res);
- }
- if (res < sg.getStartRes())
- {
- sg.setStartRes(res);
- }
-
- int col;
- for (int i = min; i <= max; i++)
- {
- col = av.getColumnSelection().adjustForHiddenColumns(i);
-
- if ((col < sg.getStartRes()) || (col > sg.getEndRes()))
- {
- av.getColumnSelection().removeElement(col);
- }
- else
- {
- av.getColumnSelection().addElement(col);
- }
- }
-
- ap.paintAlignment(false);
- }
- }
-
- public void mouseEntered(MouseEvent evt)
- {
- if (mouseDragging)
- {
- ap.seqPanel.scrollCanvas(null);
- }
- }
-
- public void mouseExited(MouseEvent evt)
- {
- if (mouseDragging)
- {
- ap.seqPanel.scrollCanvas(evt);
- }
- }
-
- public void mouseClicked(MouseEvent evt)
- {
-
- }
-
- public void mouseMoved(MouseEvent evt)
- {
- if (!av.hasHiddenColumns())
- {
- return;
- }
-
- int res = (evt.getX() / av.getCharWidth()) + av.getStartRes();
-
- res = av.getColumnSelection().adjustForHiddenColumns(res);
-
- reveal = null;
- for (int[] region : av.getColumnSelection().getHiddenColumns())
- {
- if (res + 1 == region[0] || res - 1 == region[1])
- {
- reveal = region;
- break;
- }
- }
-
- repaint();
- }
-
- public void update(Graphics g)
- {
- paint(g);
- }
-
- public void paint(Graphics g)
- {
- drawScale(g, av.getStartRes(), av.getEndRes(), getSize().width,
- getSize().height);
- }
-
- // scalewidth will normally be screenwidth,
- public void drawScale(Graphics gg, int startx, int endx, int width,
- int height)
- {
- gg.setFont(av.getFont());
- // Fill in the background
- gg.setColor(Color.white);
- gg.fillRect(0, 0, width, height);
- gg.setColor(Color.black);
-
- // Fill the selected columns
- ColumnSelection cs = av.getColumnSelection();
- gg.setColor(new Color(220, 0, 0));
- int avcharWidth = av.getCharWidth(), avcharHeight = av.getCharHeight();
- for (int i = 0; i < cs.size(); i++)
- {
- int sel = cs.columnAt(i);
- if (av.hasHiddenColumns())
- {
- sel = av.getColumnSelection().findColumnPosition(sel);
- }
-
- if ((sel >= startx) && (sel <= endx))
- {
- gg.fillRect((sel - startx) * avcharWidth, 0, avcharWidth,
- getSize().height);
- }
- }
-
- // Draw the scale numbers
- gg.setColor(Color.black);
-
- int scalestartx = (startx / 10) * 10;
-
- FontMetrics fm = gg.getFontMetrics(av.getFont());
- int y = avcharHeight - fm.getDescent();
-
- if ((scalestartx % 10) == 0)
- {
- scalestartx += 5;
- }
-
- String string;
- int maxX = 0;
-
- for (int i = scalestartx; i < endx; i += 5)
- {
- if ((i % 10) == 0)
- {
- string = String.valueOf(av.getColumnSelection()
- .adjustForHiddenColumns(i));
- if ((i - startx - 1) * avcharWidth > maxX)
- {
- gg.drawString(string, (i - startx - 1) * avcharWidth, y);
- maxX = (i - startx + 1) * avcharWidth + fm.stringWidth(string);
- }
-
- gg.drawLine(
-((i - startx - 1) * avcharWidth) + (avcharWidth / 2),
- y + 2,
- ((i - startx - 1) * avcharWidth) + (avcharWidth / 2),
- y + (fm.getDescent() * 2));
-
- }
- else
- {
- gg.drawLine(
-((i - startx - 1) * avcharWidth) + (avcharWidth / 2),
- y + fm.getDescent(),
- ((i - startx - 1) * avcharWidth)
- + (avcharWidth / 2),
- y + (fm.getDescent() * 2));
- }
- }
-
- if (av.hasHiddenColumns())
- {
- gg.setColor(Color.blue);
- int res;
- if (av.getShowHiddenMarkers())
- {
- for (int i = 0; i < av.getColumnSelection().getHiddenColumns()
- .size(); i++)
- {
-
- res = av.getColumnSelection().findHiddenRegionPosition(i)
- - startx;
-
- if (res < 0 || res > endx - scalestartx)
- {
- continue;
- }
-
- gg.fillPolygon(new int[]
- { res * avcharWidth - avcharHeight / 4,
- res * avcharWidth + avcharHeight / 4, res * avcharWidth },
- new int[]
- { y - avcharHeight / 2, y - avcharHeight / 2, y + 8 },
- 3);
-
- }
- }
-
- if (reveal != null && reveal[0] > startx && reveal[0] < endx)
- {
- gg.drawString(MessageManager.getString("label.reveal_columns"),
- reveal[0] * avcharWidth, 0);
- }
- }
-
- }
-
-}
+/*\r
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)\r
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors\r
+ * \r
+ * This file is part of Jalview.\r
+ * \r
+ * Jalview is free software: you can redistribute it and/or\r
+ * modify it under the terms of the GNU General Public License \r
+ * as published by the Free Software Foundation, either version 3\r
+ * of the License, or (at your option) any later version.\r
+ * \r
+ * Jalview is distributed in the hope that it will be useful, but \r
+ * WITHOUT ANY WARRANTY; without even the implied warranty \r
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR \r
+ * PURPOSE. See the GNU General Public License for more details.\r
+ * \r
+ * You should have received a copy of the GNU General Public License\r
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.\r
+ * The Jalview Authors are detailed in the 'AUTHORS' file.\r
+ */\r
+package jalview.appletgui;\r
+\r
+import jalview.datamodel.ColumnSelection;\r
+import jalview.datamodel.SequenceGroup;\r
+import jalview.util.MessageManager;\r
+\r
+import java.awt.Color;\r
+import java.awt.FontMetrics;\r
+import java.awt.Graphics;\r
+import java.awt.event.ActionEvent;\r
+import java.awt.event.ActionListener;\r
+import java.awt.event.InputEvent;\r
+import java.awt.event.MouseEvent;\r
+import java.awt.event.MouseListener;\r
+import java.awt.event.MouseMotionListener;\r
+\r
+import javax.swing.JMenuItem;\r
+import javax.swing.JPanel;\r
+import javax.swing.JPopupMenu;\r
+\r
+public class ScalePanel extends JPanel implements MouseMotionListener,\r
+ MouseListener\r
+{\r
+\r
+ protected int offy = 4;\r
+\r
+ public int width;\r
+\r
+ protected AlignViewport av;\r
+\r
+ AlignmentPanel ap;\r
+\r
+ boolean stretchingGroup = false;\r
+\r
+ int min; // used by mouseDragged to see if user\r
+\r
+ int max; // used by mouseDragged to see if user\r
+\r
+ boolean mouseDragging = false;\r
+\r
+ int[] reveal;\r
+\r
+ public ScalePanel(AlignViewport av, AlignmentPanel ap)\r
+ {\r
+ setLayout(null);\r
+ this.av = av;\r
+ this.ap = ap;\r
+\r
+ addMouseListener(this);\r
+ addMouseMotionListener(this);\r
+\r
+ }\r
+\r
+ public void mousePressed(MouseEvent evt)\r
+ {\r
+ int x = (evt.getX() / av.getCharWidth()) + av.getStartRes();\r
+ final int res;\r
+\r
+ if (av.hasHiddenColumns())\r
+ {\r
+ res = av.getColumnSelection().adjustForHiddenColumns(x);\r
+ }\r
+ else\r
+ {\r
+ res = x;\r
+ }\r
+\r
+ min = res;\r
+ max = res;\r
+ if ((evt.getModifiers() & InputEvent.BUTTON3_MASK) == InputEvent.BUTTON3_MASK)\r
+ {\r
+ JPopupMenu pop = new JPopupMenu();\r
+ if (reveal != null)\r
+ {\r
+ JMenuItem item = new JMenuItem(\r
+ MessageManager.getString("label.reveal"));\r
+ item.addActionListener(new ActionListener()\r
+ {\r
+ public void actionPerformed(ActionEvent e)\r
+ {\r
+ av.showColumn(reveal[0]);\r
+ reveal = null;\r
+ ap.paintAlignment(true);\r
+ if (ap.overviewPanel != null)\r
+ {\r
+ ap.overviewPanel.updateOverviewImage();\r
+ }\r
+ }\r
+ });\r
+ pop.add(item);\r
+\r
+ if (av.getColumnSelection().hasManyHiddenColumns())\r
+ {\r
+ item = new JMenuItem(MessageManager.getString("action.reveal_all"));\r
+ item.addActionListener(new ActionListener()\r
+ {\r
+ public void actionPerformed(ActionEvent e)\r
+ {\r
+ av.showAllHiddenColumns();\r
+ reveal = null;\r
+ ap.paintAlignment(true);\r
+ if (ap.overviewPanel != null)\r
+ {\r
+ ap.overviewPanel.updateOverviewImage();\r
+ }\r
+ }\r
+ });\r
+ pop.add(item);\r
+ }\r
+ this.add(pop);\r
+ pop.show(this, evt.getX(), evt.getY());\r
+ }\r
+ else if (av.getColumnSelection().contains(res))\r
+ {\r
+ JMenuItem item = new JMenuItem(\r
+ MessageManager.getString("label.hide_columns"));\r
+ item.addActionListener(new ActionListener()\r
+ {\r
+ public void actionPerformed(ActionEvent e)\r
+ {\r
+ av.hideColumns(res, res);\r
+ if (av.getSelectionGroup() != null\r
+ && av.getSelectionGroup().getSize() == av\r
+ .getAlignment().getHeight())\r
+ {\r
+ av.setSelectionGroup(null);\r
+ }\r
+\r
+ ap.paintAlignment(true);\r
+ if (ap.overviewPanel != null)\r
+ {\r
+ ap.overviewPanel.updateOverviewImage();\r
+ }\r
+ }\r
+ });\r
+ pop.add(item);\r
+ this.add(pop);\r
+ pop.show(this, evt.getX(), evt.getY());\r
+ }\r
+ }\r
+ else\r
+ // LEFT MOUSE TO SELECT\r
+ {\r
+ if (!evt.isControlDown() && !evt.isShiftDown())\r
+ {\r
+ av.getColumnSelection().clear();\r
+ }\r
+\r
+ av.getColumnSelection().addElement(res);\r
+ SequenceGroup sg = new SequenceGroup();\r
+ for (int i = 0; i < av.getAlignment().getSequences().size(); i++)\r
+ {\r
+ sg.addSequence(av.getAlignment().getSequenceAt(i), false);\r
+ }\r
+\r
+ sg.setStartRes(res);\r
+ sg.setEndRes(res);\r
+ av.setSelectionGroup(sg);\r
+\r
+ if (evt.isShiftDown())\r
+ {\r
+ int min = Math.min(av.getColumnSelection().getMin(), res);\r
+ int max = Math.max(av.getColumnSelection().getMax(), res);\r
+ for (int i = min; i < max; i++)\r
+ {\r
+ av.getColumnSelection().addElement(i);\r
+ }\r
+ sg.setStartRes(min);\r
+ sg.setEndRes(max);\r
+ }\r
+ }\r
+\r
+ ap.paintAlignment(true);\r
+ av.sendSelection();\r
+ }\r
+\r
+ public void mouseReleased(MouseEvent evt)\r
+ {\r
+ mouseDragging = false;\r
+\r
+ int res = (evt.getX() / av.getCharWidth()) + av.getStartRes();\r
+\r
+ if (res > av.getAlignment().getWidth())\r
+ {\r
+ res = av.getAlignment().getWidth() - 1;\r
+ }\r
+\r
+ if (av.hasHiddenColumns())\r
+ {\r
+ res = av.getColumnSelection().adjustForHiddenColumns(res);\r
+ }\r
+\r
+ if (!stretchingGroup)\r
+ {\r
+ ap.paintAlignment(false);\r
+\r
+ return;\r
+ }\r
+\r
+ SequenceGroup sg = av.getSelectionGroup();\r
+\r
+ if (res > sg.getStartRes())\r
+ {\r
+ sg.setEndRes(res);\r
+ }\r
+ else if (res < sg.getStartRes())\r
+ {\r
+ sg.setStartRes(res);\r
+ }\r
+\r
+ stretchingGroup = false;\r
+ ap.paintAlignment(false);\r
+ av.sendSelection();\r
+ }\r
+\r
+ public void mouseDragged(MouseEvent evt)\r
+ {\r
+ mouseDragging = true;\r
+\r
+ int res = (evt.getX() / av.getCharWidth()) + av.getStartRes();\r
+ if (res < 0)\r
+ {\r
+ res = 0;\r
+ }\r
+\r
+ if (av.hasHiddenColumns())\r
+ {\r
+ res = av.getColumnSelection().adjustForHiddenColumns(res);\r
+ }\r
+\r
+ if (res > av.getAlignment().getWidth())\r
+ {\r
+ res = av.getAlignment().getWidth() - 1;\r
+ }\r
+\r
+ if (res < min)\r
+ {\r
+ min = res;\r
+ }\r
+\r
+ if (res > max)\r
+ {\r
+ max = res;\r
+ }\r
+\r
+ SequenceGroup sg = av.getSelectionGroup();\r
+\r
+ if (sg != null)\r
+ {\r
+ stretchingGroup = true;\r
+\r
+ if (!av.getColumnSelection().contains(res))\r
+ {\r
+ av.getColumnSelection().addElement(res);\r
+ }\r
+\r
+ if (res > sg.getStartRes())\r
+ {\r
+ sg.setEndRes(res);\r
+ }\r
+ if (res < sg.getStartRes())\r
+ {\r
+ sg.setStartRes(res);\r
+ }\r
+\r
+ int col;\r
+ for (int i = min; i <= max; i++)\r
+ {\r
+ col = av.getColumnSelection().adjustForHiddenColumns(i);\r
+\r
+ if ((col < sg.getStartRes()) || (col > sg.getEndRes()))\r
+ {\r
+ av.getColumnSelection().removeElement(col);\r
+ }\r
+ else\r
+ {\r
+ av.getColumnSelection().addElement(col);\r
+ }\r
+ }\r
+\r
+ ap.paintAlignment(false);\r
+ }\r
+ }\r
+\r
+ public void mouseEntered(MouseEvent evt)\r
+ {\r
+ if (mouseDragging)\r
+ {\r
+ ap.seqPanel.scrollCanvas(null);\r
+ }\r
+ }\r
+\r
+ public void mouseExited(MouseEvent evt)\r
+ {\r
+ if (mouseDragging)\r
+ {\r
+ ap.seqPanel.scrollCanvas(evt);\r
+ }\r
+ }\r
+\r
+ public void mouseClicked(MouseEvent evt)\r
+ {\r
+\r
+ }\r
+\r
+ public void mouseMoved(MouseEvent evt)\r
+ {\r
+ if (!av.hasHiddenColumns())\r
+ {\r
+ return;\r
+ }\r
+\r
+ int res = (evt.getX() / av.getCharWidth()) + av.getStartRes();\r
+\r
+ res = av.getColumnSelection().adjustForHiddenColumns(res);\r
+\r
+ reveal = null;\r
+ for (int[] region : av.getColumnSelection().getHiddenColumns())\r
+ {\r
+ if (res + 1 == region[0] || res - 1 == region[1])\r
+ {\r
+ reveal = region;\r
+ break;\r
+ }\r
+ }\r
+\r
+ repaint();\r
+ }\r
+\r
+ public void update(Graphics g)\r
+ {\r
+ paint(g);\r
+ }\r
+\r
+ public void paint(Graphics g)\r
+ {\r
+ drawScale(g, av.getStartRes(), av.getEndRes(), getSize().width,\r
+ getSize().height);\r
+ }\r
+\r
+ // scalewidth will normally be screenwidth,\r
+ public void drawScale(Graphics gg, int startx, int endx, int width,\r
+ int height)\r
+ {\r
+ gg.setFont(av.getFont());\r
+ // Fill in the background\r
+ gg.setColor(Color.white);\r
+ gg.fillRect(0, 0, width, height);\r
+ gg.setColor(Color.black);\r
+\r
+ // Fill the selected columns\r
+ ColumnSelection cs = av.getColumnSelection();\r
+ gg.setColor(new Color(220, 0, 0));\r
+ int avcharWidth = av.getCharWidth(), avcharHeight = av.getCharHeight();\r
+ for (int i = 0; i < cs.size(); i++)\r
+ {\r
+ int sel = cs.columnAt(i);\r
+ if (av.hasHiddenColumns())\r
+ {\r
+ sel = av.getColumnSelection().findColumnPosition(sel);\r
+ }\r
+\r
+ if ((sel >= startx) && (sel <= endx))\r
+ {\r
+ gg.fillRect((sel - startx) * avcharWidth, 0, avcharWidth,\r
+ getSize().height);\r
+ }\r
+ }\r
+\r
+ // Draw the scale numbers\r
+ gg.setColor(Color.black);\r
+\r
+ int scalestartx = (startx / 10) * 10;\r
+\r
+ FontMetrics fm = gg.getFontMetrics(av.getFont());\r
+ int y = avcharHeight - fm.getDescent();\r
+\r
+ if ((scalestartx % 10) == 0)\r
+ {\r
+ scalestartx += 5;\r
+ }\r
+\r
+ String string;\r
+ int maxX = 0;\r
+\r
+ for (int i = scalestartx; i < endx; i += 5)\r
+ {\r
+ if ((i % 10) == 0)\r
+ {\r
+ string = String.valueOf(av.getColumnSelection()\r
+ .adjustForHiddenColumns(i));\r
+ if ((i - startx - 1) * avcharWidth > maxX)\r
+ {\r
+ gg.drawString(string, (i - startx - 1) * avcharWidth, y);\r
+ maxX = (i - startx + 1) * avcharWidth + fm.stringWidth(string);\r
+ }\r
+\r
+ gg.drawLine(\r
+((i - startx - 1) * avcharWidth) + (avcharWidth / 2),\r
+ y + 2,\r
+ ((i - startx - 1) * avcharWidth) + (avcharWidth / 2),\r
+ y + (fm.getDescent() * 2));\r
+\r
+ }\r
+ else\r
+ {\r
+ gg.drawLine(\r
+((i - startx - 1) * avcharWidth) + (avcharWidth / 2),\r
+ y + fm.getDescent(),\r
+ ((i - startx - 1) * avcharWidth)\r
+ + (avcharWidth / 2),\r
+ y + (fm.getDescent() * 2));\r
+ }\r
+ }\r
+\r
+ if (av.hasHiddenColumns())\r
+ {\r
+ gg.setColor(Color.blue);\r
+ int res;\r
+ if (av.getShowHiddenMarkers())\r
+ {\r
+ for (int i = 0; i < av.getColumnSelection().getHiddenColumns()\r
+ .size(); i++)\r
+ {\r
+\r
+ res = av.getColumnSelection().findHiddenRegionPosition(i)\r
+ - startx;\r
+\r
+ if (res < 0 || res > endx - scalestartx)\r
+ {\r
+ continue;\r
+ }\r
+\r
+ gg.fillPolygon(new int[]\r
+ { res * avcharWidth - avcharHeight / 4,\r
+ res * avcharWidth + avcharHeight / 4, res * avcharWidth },\r
+ new int[]\r
+ { y - avcharHeight / 2, y - avcharHeight / 2, y + 8 },\r
+ 3);\r
+\r
+ }\r
+ }\r
+\r
+ if (reveal != null && reveal[0] > startx && reveal[0] < endx)\r
+ {\r
+ gg.drawString(MessageManager.getString("label.reveal_columns"),\r
+ reveal[0] * avcharWidth, 0);\r
+ }\r
+ }\r
+\r
+ }\r
+\r
+}\r
git://source.jalview.org / jalviewjs.git / blobdiff