move jsp for reports to a separate dir
[proteocache.git] / webapp / view / reportProteinSequences.jsp
diff --git a/webapp/view/reportProteinSequences.jsp b/webapp/view/reportProteinSequences.jsp
deleted file mode 100644 (file)
index b7e7923..0000000
+++ /dev/null
@@ -1,119 +0,0 @@
-<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
-<%@ page trimDirectiveWhitespaces="true"%>
-<%@ taglib uri="http://www.springframework.org/tags" prefix="spring"%>
-<%@ taglib uri="http://java.sun.com/jsp/jstl/core" prefix="c"%>
-<%@ taglib uri="http://java.sun.com/jsp/jstl/functions" prefix="fn"%>
-<%@ taglib uri="http://java.sun.com/jsp/jstl/fmt" prefix="fmt"%>
-<%@page import="java.util.ArrayList"%>
-
-<html>
-<jsp:include page="fragments/header.jsp" />
-<body>
-       <div class="container">
-               <jsp:include page="fragments/mainmenu.jsp" />
-               <spring:url value="/job/results" var="job_query" />
-               <spring:url value="/sequence/sequence/results?sequence=${prot}&searchtype=${searchtype}" var="the_query"/>
-               <c:set var="shortensequencelength" value="108"/>
-
-               <!-- reload and CSV buttons  -->
-               <ul class="nav navbar-nav navbar-right">
-                       <li>
-                       <a href="${the_query}" class="btn btn-default active">Reload</a>
-                       </li>
-                       <c:choose><c:when test="${csvfile != '' and csvfile != null}">
-                       <li>
-                       <a id="forCSVfile" download="data.csv" href="data:application/csv;charset=utf-8,${csvfile}" class="btn btn-default active">CSV</a>
-                       </li>
-                       </c:when></c:choose>
-               </ul>
-               
-       <div class="panel panel-default">
-       <div class="panel-heading">
-               <c:choose>
-                       <c:when test="${searchtype == 'whole'}">
-                               <p style="font-weight:bold;">
-                               Jobs for the protein sequence:
-                               <script> document.write(shorten('${prot}', '${shortensequencelength}'));</script>
-                               </p>
-                       </c:when>
-                       <c:otherwise>
-                               <p style="font-weight:bold;">
-                               Jobs for the protein sequences, which include the substring: 
-                               <script> document.write(shorten('${prot}', '${shortensequencelength}'));</script>
-                               </p>
-                       </c:otherwise>
-               </c:choose>
-       </div>
-
-       <div class="panel-body">
-               <c:choose>
-                       <c:when test="${njobs == 0}">
-                               <p>No jobs found</p>
-                       </c:when>
-                       <c:otherwise>
-                               <p>${njobs} jobs found</p>
-                               <div class="table-responsive">
-                                       <div class="grid-wrapper-div">
-                                       <table class="table table-striped table-hover table-bordered">
-                                               <thead>
-                                                       <tr>
-                                                               <th>Job ID</th>
-                                                               <th>annotation</th>
-                                                               <th>Sequence</th>
-                                                       </tr>
-                                               </thead>
-                                               <tbody>
-                                                       <c:forEach items="${results}" var="res" varStatus="status">
-                                                               <c:forEach items="${res.jobid}" var="id" varStatus="status">
-                                                               <tr>
-                                                                       <th rowspan="${res.size + 2}"><a
-                                                                               title="Click to view the job log"
-                                                                               href="${job_query}?IdJob=${id}">${id}</a></th>
-                                                               </tr>
-                                                               <tr>
-                                                                       <td style="text-align: center; font-weight: bold; font-family: monospace">Sequence</td>
-                                                                       <c:if test="${searchtype == 'whole'}">
-                                                                               <td
-                                                                                       style="text-align: left; border-buttom: dotted; font-family: monospace"><c:out
-                                                                                               value="${res.sequence}" /></td>
-                                                                       </c:if>
-                                                                       <c:if test="${searchtype == 'partial'}">
-                                                                               <td
-                                                                                       style="text-align: left; border-buttom: dotted; font-family: monospace">
-                                                                                       <c:forEach items="${res.subProt}" var="seq">
-                                                                                               <c:choose>
-                                                       <c:when test="${fn:contains(seq, prot)}">
-                                                       <span style="background-color: blue">${seq}</span></c:when>
-                                                       <c:otherwise>${seq}</c:otherwise>
-                                                                                               </c:choose>
-                                                                                       </c:forEach>
-                                                                               </td>
-                                                                       </c:if>
-                                                               </tr>
-                                                               <c:forEach items="${res.predictions}" var="seq"
-                                                                       varStatus="status">
-                                                                       <tr>
-                                                                               <td
-                                                                                       style="text-align: center; font-weight: bold; font-family: monospace"><c:out
-                                                                                               value="${seq.key}" /></td>
-                                                                               <td
-                                                                                       style="text-align: left; border-buttom: dotted; font-family: monospace"><c:out
-                                                                                               value="${seq.value}" /></td>
-                                                                       </tr>
-                                                               </c:forEach>
-                                                       </c:forEach>
-                                                       </c:forEach>
-                                               </tbody>
-                                       </table>
-                                       </div>
-                               </div>
-                       </c:otherwise>
-               </c:choose>
-
-       </div>
-       </div>
-
-               <jsp:include page="fragments/footer.jsp" />
-       </div>
-</body>
-</html>
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