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JAL-3033 tarball from site
[jalview.git]
/
examples
/
2018-05-28
gmungoc
Merge remote-tracking branch 'origin/releases/Release_2...
tree
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commitdiff
2018-05-23
gmungoc
JAL-2997 handle tab-delimited trailing column number...
tree
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commitdiff
2018-02-20
Jim Procter
Merge branch 'releases/Release_2_10_4_Branch' into...
tree
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commitdiff
2018-01-10
gmungoc
JAL-1793 update spike branch to latest
tree
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commitdiff
2017-12-08
gmungoc
JAL-2843 example filters added
tree
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commitdiff
2017-12-01
Jim Procter
Merge branch 'develop' into bugs/JAL-2780_JAL-2781_pdbn...
tree
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commitdiff
2017-10-24
gmungoc
JAL-2738 update spike branch with latest
tree
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commitdiff
2017-10-20
Jim Procter
Merge branch 'patch/JAL-547_pid_groovyscript' into...
tree
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commitdiff
2017-10-20
Jim Procter
JAL-547 fix NPE when no selection available
tree
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commitdiff
2017-10-20
Jim Procter
JAL-547 only generate matrix for current selection...
tree
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commitdiff
2017-10-20
Jim Procter
Merge branch 'patch/JAL-547_pid_groovyscript' into...
tree
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commitdiff
2017-10-20
Jim Procter
JAL-547 updated the PID script for 2.10.x series score...
tree
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commitdiff
2017-10-18
Jim Procter
JAL-2781 example fragment with missing backbone atoms...
tree
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commitdiff
2017-10-18
Jim Procter
JAL-2781 example fragment with missing backbone atoms...
tree
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commitdiff
2017-10-18
Jim Procter
JAL-2780 example fragment with negative RESNUM
tree
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commitdiff
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
tree
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commitdiff
2017-08-09
Jim Procter
JAL-2418 JAL-2398 JAL-2397 simpler documentation for...
tree
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commitdiff
2017-08-09
Jim Procter
JAL-2397 JAL-2398 documentation for reinstating legacy...
tree
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commitdiff
2017-08-07
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-08-04
gmungoc
JAL-2500 JAL-2365 lightGray changed to lightgray for...
tree
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commitdiff
2017-08-04
gmungoc
JAL-2500 JAL-2365 lightGray changed to gray in example...
tree
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commitdiff
2017-08-03
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-08-03
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-08-03
gmungoc
JAL-2500 JAL-2365 feature colour "gray" _not_ "lightgra...
tree
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commitdiff
2017-08-03
gmungoc
JAL-2500 JAL-2365 lightGray changed to lightgray for...
tree
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commitdiff
2017-08-03
gmungoc
JAL-2500 JAL-2365 lightGray changed to gray in example...
tree
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commitdiff
2017-08-02
Jim Procter
Merge branch 'bug/JAL-2321' into bug/JAL-2321_merged
tree
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commitdiff
2017-08-01
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-07-28
gmungoc
JAL-2631 make minimum colour not white
tree
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commitdiff
2017-07-28
gmungoc
JAL-2631 add graduated colour kdH features to example
tree
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commitdiff
2017-06-09
gmungoc
JAL-2446 merged to spike branch
tree
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commitdiff
2017-05-25
gmungoc
JAL-2505 removed SequenceFeature constructor JAL-1641...
tree
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commitdiff
2017-05-22
gmungoc
JAL-2546 JAL-2490 efficient lookup of features, correct...
tree
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commitdiff
2017-05-16
Jim Procter
JAL-384 - groovy scripts for conserved/unconserved...
tree
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commitdiff
2017-05-12
Jim Procter
JAL-2228 updated script in help docs, renamed docs...
tree
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commitdiff
2017-05-04
Jim Procter
Merge branch 'develop' into features/JAL-2228_efficient...
tree
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commitdiff
2017-05-01
gmungoc
JAL-2489 JAL-2371 reinstate calls to
tree
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commitdiff
2017-04-27
Jim Procter
JAL-1933 applet doc for showOccupancy parameter
tree
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commitdiff
2017-03-06
kiramt
JAL-2388 Corrected overview panel behaviour, updated...
tree
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commitdiff
2017-02-23
kiramt
JAL-2388 Unit tests in progress
tree
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commitdiff
2017-02-08
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-02-07
gmungoc
JAL-2397 flag provided for 2.10.1 PCA gap calculation...
tree
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commitdiff
2017-02-07
gmungoc
JAL-2398 include 'compatibility mode' for C->R score...
tree
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commitdiff
2017-02-07
gmungoc
JAL-2397 scripts to toggle 2.10.1 / 2.10.2 PCA calculat...
tree
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commitdiff
2017-01-26
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-01-18
gmungoc
JAL-2228 removed FeatureCounterI in favour of FeatureSe...
tree
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commitdiff
2017-01-17
gmungoc
Merge branch 'features/JAL-2360colourSchemeApplicabilit...
tree
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commitdiff
2017-01-17
gmungoc
Merge branch 'develop' into features/JAL-2360colourSche...
tree
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commitdiff
2017-01-11
gmungoc
JAL-2344 separated AlignmentFileI into AlignmentFileRea...
tree
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commitdiff
2017-01-11
gmungoc
JAL-2344 groovy script that registers a new file format
tree
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commitdiff
2017-01-09
gmungoc
JAL-2371 pull up isNucleotide to SequenceCollectionI
tree
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commitdiff
2017-01-09
gmungoc
JAL-2371 remove ColourSchemeI.findColour(c), pure inter...
tree
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commitdiff
2017-01-09
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-01-05
gmungoc
Merge branch 'features/JAL-2360colourSchemeApplicabilit...
tree
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commitdiff
2017-01-05
gmungoc
Merge branch 'develop' into features/JAL-2360colourSche...
tree
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commitdiff
2017-01-04
gmungoc
JAL-2371 CollectionColourScheme wraps ColourSchemeI
tree
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commitdiff
2016-12-29
gmungoc
JAL-2630 first pass groovy colour scheme (with slight...
tree
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commitdiff
2016-12-16
gmungoc
JAL-2360 refactoring for JalviewColourScheme enum,
tree
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commitdiff
2016-12-15
kiramt
JAL-2316 Changes following review.
tree
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commitdiff
2016-12-14
Jim Procter
Merge branch 'patch/JAL-2197_jpredforjnets' into develop
tree
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commitdiff
2016-11-28
tcofoegbu
Merge branch 'features/JAL-2326_JOptionPane-refactoring...
tree
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commitdiff
2016-11-24
tcofoegbu
JAL-2326 updated references of JOptionPane to JvOptionPane
tree
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commitdiff
2016-11-22
Jim Procter
Merge branch 'features/JAL-2177_update_jmol_to_14.6...
tree
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commitdiff
2016-11-12
Jim Procter
JAL-2321 added test data. Now need a test.
tree
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commitdiff
2016-11-11
tcofoegbu
JAL-2277 Refactored out duplicated method - printUnwrap...
tree
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commitdiff
2016-10-27
tcofoegbu
JAL-2177 Jmol update from: Jmol-14.2.14_2015.06.11...
tree
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commitdiff
2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
tree
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commitdiff
2016-10-24
Jim Procter
Merge branch 'releases/Release_2_10_0_Branch'
tree
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commitdiff
2016-10-24
Jim Procter
Merge branch 'patch/JAL-2234_renameFER1_ARATH' into...
tree
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commitdiff
2016-10-24
Jim Procter
JAL-2234 reordered seqs (after sequence data was reorde...
tree
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commitdiff
2016-10-24
Jim Procter
JAL-2234 rename seqs for linked jalview examples
tree
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commitdiff
2016-10-24
Jim Procter
JAL-2197 renamed Jnet to Jared in help, web services...
tree
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commitdiff
2016-10-24
Jim Procter
JAL-2197 add jpredfile as alternative form of jnetfile...
tree
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commitdiff
2016-10-19
Jim Procter
JAL-2269 JAL-2195 review and revised test
tree
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commitdiff
2016-10-13
Jim Procter
JAL-2234 switch FER1_ARATH and FER2_ARATH in ferredoxin...
tree
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commitdiff
2016-10-12
Jim Procter
JAL-2234 switched FER1_ARATH and FER2_ARATH in example...
tree
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commitdiff
2016-10-10
tcofoegbu
JAL-2262 JAL-2195 unit test for bug
bug/JAL-2262_dnd-for-local-structure-files
tree
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commitdiff
2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
tree
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commitdiff
2016-10-05
Jim Procter
JAL-2189 license header
tree
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commitdiff
2016-10-05
Jim Procter
JAL-2189 apply license
tree
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commitdiff
2016-10-04
Jim Procter
JAL-2005 JAL-599 test alignment and features for checki...
tree
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commitdiff
2016-09-30
gmungoc
JAL-2234 FER1_ARATH renamed FER2_ARATH and vice versa
tree
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commitdiff
2016-09-25
Jim Procter
JAL-2228 groovy demo for FeatureSetCounterI
tree
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commitdiff
2016-09-22
Jim Procter
JAL-2189 JAL-1812 JAL-2068 new groovy doc section and...
tree
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commitdiff
2016-09-07
Jim Procter
JAL-1670 groundhog day: fix FeaturesFileTest by redacti...
bug/JAL-1803_JAL-2157
tree
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commitdiff
2016-08-31
gmungoc
JAL-1670 repositioned feature for backwards compatibili...
tree
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commitdiff
2016-07-18
Jim Procter
JAL-2068 clearer instructions on how to use script...
tree
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commitdiff
2016-07-18
Jim Procter
JAL-2068 clarify comments
tree
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commitdiff
2016-06-23
tcofoegbu
JAL-1996 added notes for an alternative way to view...
tree
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commitdiff
2016-06-22
tcofoegbu
JAL-1996 added link for viewing example source codes...
tree
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commitdiff
2016-06-22
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
tree
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commitdiff
2016-06-22
tcofoegbu
JAL-1996 removed quick links in example pages, added...
tree
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commitdiff
2016-06-21
Jim Procter
Merge branch 'features/JAL-1956_featureStyles' into...
tree
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commitdiff
2016-06-20
tcofoegbu
JAL-1996 added JalviewApplet to download list in applet...
tree
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commitdiff
2016-06-20
Jim Procter
JAL-1868 fix typo in test data.
tree
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commitdiff
2016-06-20
Jim Procter
Merge branch 'develop' into features/JAL-1812_JAL-2083_...
features/JAL-1812_JAL-2083_groovyBinding
tree
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commitdiff
2016-06-17
tcofoegbu
JAL-1996 update applet deployment note pages
tree
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commitdiff
2016-05-26
gmungoc
JAL-1670 add non-positional feature with link to demons...
tree
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commitdiff
2016-05-26
gmungoc
JAL-2079 update examples to new pfam.xfam.org domain
tree
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commitdiff
2016-05-10
gmungoc
Merge branch 'develop' into features/JAL-1956_featureStyles
tree
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commitdiff
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