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Merge branch 'releases/Release_2_11_4_Branch'
[jalview.git]
/
src
/
jalview
/
analysis
/ PaSiMap.java
2024-08-29
Jim Procter
JAL-4446 improved reporting of progress, and transition...
feature/JAL-4446_cancellable_pasimap_etal
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2024-08-05
Jim Procter
JAL-4446 .. missing methods for cancellable pasimap
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2024-08-05
Jim Procter
JAL-1551 gradle spotlessApply and doc tweaks
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2024-05-24
Jim Procter
JAL-4257 JAL-4159 JAL-789 tidy up passing of score...
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2024-05-23
MorellThomas
Fix PaSiMap taking scoreModels input and allow AlignSeq...
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2024-05-21
Jim Procter
JAL-4159 connectivity should be computed for the sequen...
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2024-04-18
MorellThomas
Merge branch 'test/progressBar' into feature/JAL-4159_p...
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2024-04-18
MorellThomas
Implemented ProgressBar for PaSiMap
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2024-04-12
MorellThomas
inlcude progress
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2024-03-15
MorellThomas
Fix output of all dimensions
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2024-03-15
MorellThomas
Alogirthm working, but still giving slightly off results
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2024-03-07
MorellThomas
Inlcude 8 dimensions
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2024-03-06
MorellThomas
Test version to switch branches
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2024-01-31
MorellThomas
Fix output points column labels
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2024-01-10
MorellThomas
Fixed PaSiMap output columns
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2023-12-04
MorellThomas
New GPCAPanel button : output pairwise alignments ...
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2023-12-01
MorellThomas
Applying adjustablenw_params.patch (JAL-4159)
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2023-09-18
MorellThomas
Fix buttons on the PaSiMap plot window
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2023-09-16
MorellThomas
Correctly working implementation of the PaSiMap pipeline
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2023-09-16
MorellThomas
Almost working
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2023-09-08
MorellThomas
Properly integrated endGaps option for AlignSeq.traceAl...
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2023-09-07
MorellThomas
Implemented least-squares optimisation in ccAnalysis
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2023-08-04
MorellThomas
Fix alignment and score calculation for cc_analysis
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2023-07-22
MorellThomas
Implement MSA, scoring and counting the connections
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2023-07-09
MorellThomas
Copied PCA files to PaSiMap analogues and changed all...
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