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Merge branch 'releases/Release_2_11_4_Branch'
[jalview.git] / src / jalview / analysis / PaSiMap.java
2024-08-29 Jim ProcterJAL-4446 improved reporting of progress, and transition... feature/JAL-4446_cancellable_pasimap_etal commit | commitdiff
2024-08-05 Jim ProcterJAL-4446 .. missing methods for cancellable pasimap commit | commitdiff
2024-08-05 Jim ProcterJAL-1551 gradle spotlessApply and doc tweaks commit | commitdiff
2024-05-24 Jim ProcterJAL-4257 JAL-4159 JAL-789 tidy up passing of score... commit | commitdiff
2024-05-23 MorellThomasFix PaSiMap taking scoreModels input and allow AlignSeq... commit | commitdiff
2024-05-21 Jim ProcterJAL-4159 connectivity should be computed for the sequen... commit | commitdiff
2024-04-18 MorellThomasMerge branch 'test/progressBar' into feature/JAL-4159_p... commit | commitdiff
2024-04-18 MorellThomasImplemented ProgressBar for PaSiMap commit | commitdiff
2024-04-12 MorellThomasinlcude progress commit | commitdiff
2024-03-15 MorellThomasFix output of all dimensions commit | commitdiff
2024-03-15 MorellThomasAlogirthm working, but still giving slightly off results commit | commitdiff
2024-03-07 MorellThomasInlcude 8 dimensions commit | commitdiff
2024-03-06 MorellThomasTest version to switch branches commit | commitdiff
2024-01-31 MorellThomasFix output points column labels commit | commitdiff
2024-01-10 MorellThomasFixed PaSiMap output columns commit | commitdiff
2023-12-04 MorellThomasNew GPCAPanel button : output pairwise alignments ... commit | commitdiff
2023-12-01 MorellThomasApplying adjustablenw_params.patch (JAL-4159) commit | commitdiff
2023-09-18 MorellThomasFix buttons on the PaSiMap plot window commit | commitdiff
2023-09-16 MorellThomasCorrectly working implementation of the PaSiMap pipeline commit | commitdiff
2023-09-16 MorellThomasAlmost working commit | commitdiff
2023-09-08 MorellThomasProperly integrated endGaps option for AlignSeq.traceAl... commit | commitdiff
2023-09-07 MorellThomasImplemented least-squares optimisation in ccAnalysis commit | commitdiff
2023-08-04 MorellThomasFix alignment and score calculation for cc_analysis commit | commitdiff
2023-07-22 MorellThomasImplement MSA, scoring and counting the connections commit | commitdiff
2023-07-09 MorellThomasCopied PCA files to PaSiMap analogues and changed all... commit | commitdiff