| 2008-07-18 |
jprocter | Sequence label colour stored for each sequence group |
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| 2008-04-29 |
jprocter | added SeqSearch service interface. Documented and refac... |
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| 2008-04-21 |
jprocter | added centre annotation labels menu entry (and commente... |
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| 2008-04-17 |
jprocter | todo for refactoring webservice GUI creation mechanism |
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| 2008-02-22 |
jprocter | On 'save' menu entry check to see if fileformat is... |
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| 2008-01-29 |
jprocter | javadoc |
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| 2008-01-21 |
jprocter | javadoc |
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| 2007-12-21 |
jprocter | sequence db fetcher metadata for multiple sequence... |
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| 2007-11-16 |
jprocter | todo for sortbyPID operating on current selection rathe... |
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| 2007-11-12 |
jprocter | public method to indicate if there are progress bars... |
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| 2007-10-31 |
jprocter | rejiggered loadDataFile and parseFeatureFile so JNet... |
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| 2007-10-31 |
jprocter | javadoc on webservice discovery method |
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| 2007-10-24 |
jprocter | thread for product retrieval |
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| 2007-10-04 |
jprocter | refactored list of file extensions and file format... |
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| 2007-10-02 |
jprocter | added colSel as a parameter formatAdaptor print functio... |
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| 2007-08-22 |
jprocter | popup for non-fatal tree parsing error |
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| 2007-08-02 |
jprocter | javadoc and bugfix for 'save' when jalview is default... |
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| 2007-08-01 |
jprocter | ensure current dataset reference is passed to the cross... |
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| 2007-07-25 |
jprocter | bugfix for vamsas demo and IO rearrangement for AMSAFil... |
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| 2007-07-13 |
jprocter | pickmanager on sequence and alignment position, vamsas... |
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| 2007-05-10 |
jprocter | documentation |
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| 2007-05-10 |
amwaterhouse | Dont duplicate annotations in multiple views |
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| 2007-05-08 |
amwaterhouse | check for null annotations |
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| 2007-05-02 |
jprocter | undo stackempty error fix, refactored do and undo(... |
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| 2007-05-01 |
jprocter | sort-by-score works of sequence-annotation, not alignme... |
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| 2007-04-30 |
jprocter | rebuild sort by scores menu when new annotation is... |
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| 2007-04-27 |
amwaterhouse | Put alignmentProperties in scrollpane |
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| 2007-04-27 |
jprocter | newlines in alignment properties converted to <br> |
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| 2007-04-26 |
jprocter | added/tested sort by scores menu and added basic extrac... |
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| 2007-04-25 |
jprocter | getContentPane().add alignmentProperties popup. |
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| 2007-04-25 |
amwaterhouse | View Properties |
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| 2007-04-23 |
jprocter | functions that operate on references to sequences in... |
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| 2007-04-23 |
amwaterhouse | Dbref fetcher takes sequences, not alignment |
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| 2007-04-20 |
jprocter | global dbref fetch option in web services menu. |
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| 2007-04-19 |
jprocter | fixed column selection cut/paste and self paste. |
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| 2007-04-19 |
amwaterhouse | Only setDropTarget if Desktop is not null |
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| 2007-04-17 |
jprocter | paste adds or creates full copies of objects in clipboa... |
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| 2007-04-13 |
amwaterhouse | FeatureRenderer takes alignmentPanel |
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| 2007-04-12 |
amwaterhouse | Number pad keys can be used in cursor mode |
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| 2007-04-02 |
amwaterhouse | Allow for scroll bar height |
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| 2007-04-02 |
amwaterhouse | destroy destroyed |
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| 2007-04-02 |
amwaterhouse | destroy destroyed |
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| 2007-04-02 |
amwaterhouse | Destroy Alignment when closing frame |
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| 2007-03-22 |
amwaterhouse | Set gatherViewsHere false when making a new tab |
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| 2007-03-19 |
jprocter | translate aligned cDNA to aligned peptide |
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| 2007-02-27 |
amwaterhouse | Use paintAlignment |
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| 2007-02-12 |
amwaterhouse | Reload jar files |
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| 2007-02-09 |
jprocter | added 'show overview' preference. |
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| 2007-02-07 |
amwaterhouse | Formatting |
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| 2007-02-07 |
amwaterhouse | reload, just close this frame and open a new one |
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| 2007-01-31 |
amwaterhouse | Can edit annotation name/description |
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| 2007-01-31 |
amwaterhouse | Dont export annotations if not visible |
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| 2007-01-30 |
amwaterhouse | Output groups in annotation file |
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| 2007-01-29 |
amwaterhouse | scaleAbove, left and right set when tab selection changes |
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| 2007-01-25 |
amwaterhouse | Annotations move when full alignment edited |
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| 2007-01-24 |
amwaterhouse | Page setup added |
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| 2007-01-23 |
amwaterhouse | boolean for internal copies |
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| 2007-01-23 |
amwaterhouse | Hidden representatives moved from sequence to viewport |
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| 2007-01-19 |
amwaterhouse | Neeed to know protocol for annotation loading |
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| 2007-01-18 |
amwaterhouse | File Parsing returns Alignments, not Sequence[] |
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| 2007-01-04 |
amwaterhouse | Send new sequences when firing alignment changed |
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| 2006-11-30 |
amwaterhouse | Warning message if file was not saved, repaint ids... |
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| 2006-11-28 |
amwaterhouse | Tree title |
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| 2006-11-27 |
amwaterhouse | Cant save to a URL loaded Jar file |
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| 2006-11-27 |
amwaterhouse | Cant save to a URL loaded Jar file |
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| 2006-11-24 |
amwaterhouse | seqColours null |
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| 2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
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| 2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
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| 2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
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| 2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
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| 2006-11-23 |
amwaterhouse | Associate PCA with multiple views |
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| 2006-11-22 |
amwaterhouse | Dynamically build tree sort menu when sort menu is... |
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| 2006-11-22 |
amwaterhouse | Renaming viewNames |
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| 2006-11-21 |
jprocter | fix unselectable tree leaf nodes when node mapping... |
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| 2006-11-21 |
amwaterhouse | expanded views, j2xml use setinitialtabvisible, close... |
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| 2006-11-21 |
amwaterhouse | Use textColourChooser |
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| 2006-11-20 |
amwaterhouse | expand and gather |
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| 2006-11-20 |
amwaterhouse | look for current alignframe to search |
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| 2006-11-15 |
amwaterhouse | Add remove seq from multiple views, must fire alignment... |
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| 2006-11-15 |
amwaterhouse | right align ids |
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| 2006-11-14 |
amwaterhouse | Paintrefresh alignpanel |
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| 2006-11-13 |
amwaterhouse | REload from URL |
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| 2006-11-13 |
amwaterhouse | Text colour adapter |
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| 2006-11-09 |
amwaterhouse | remove system.out |
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| 2006-11-09 |
amwaterhouse | smooth font gone, setFileName and close open alignPanel |
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| 2006-11-08 |
amwaterhouse | Reload alignment |
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| 2006-11-08 |
amwaterhouse | Reload alignment |
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| 2006-11-06 |
amwaterhouse | Only recalc consensus for start to end of group |
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| 2006-11-06 |
amwaterhouse | accelerators, save menu item |
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| 2006-11-03 |
amwaterhouse | Alignpanel is not new if copied from j2xml |
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| 2006-11-03 |
amwaterhouse | Use Jalview2XML to copy AlignmentPanel |
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| 2006-11-02 |
amwaterhouse | selected states set in updateMenusFromViewport |
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| 2006-10-27 |
amwaterhouse | PaintRefresher can calculate seqs added or removed |
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| 2006-10-26 |
amwaterhouse | Only adds history item if size>0 |
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| 2006-10-26 |
amwaterhouse | Dont readd the undo |
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| 2006-10-26 |
amwaterhouse | remove gaps size range |
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| 2006-10-25 |
amwaterhouse | viewport.hasHiddenColumns updated after undo/redo performed |
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| 2006-10-24 |
amwaterhouse | HistoryItem replaced by CommandI |
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| 2006-10-18 |
amwaterhouse | No longer a FeatureListener |
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| 2006-10-12 |
amwaterhouse | If conservation is null, disable Blosum62 and conservat... |
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git://source.jalview.org / jalview.git / history