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JAL-4001 make page_location the same encoding as the old jgoogleanalytics
[jalview.git]
/
src
/
2023-06-16
Ben Soares
JAL-4001 make page_location the same encoding as the...
tree
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commitdiff
2023-06-15
Ben Soares
JAL-4001 Changed for Java 8 compatibility
tree
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commitdiff
2023-06-14
Ben Soares
JAL-4001 Trying to see extra information in GA dashboard
tree
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commitdiff
2023-06-14
Ben Soares
Merge branch 'develop' into task/JAL-4001_migrate_googl...
tree
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commitdiff
2023-06-09
Ben Soares
JAL-3599 Make jalviewjs dependOn jalviewjsLaunchTest...
tree
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commitdiff
2023-06-09
Ben Soares
JAL-3599 Deliberate NPE to see if build plan fails
tree
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commitdiff
2023-06-08
Ben Soares
JAL-3599 gradle tasks to test JalviewJS launches in...
tree
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commitdiff
2023-06-08
Ben Soares
JAL-4001 Only send defaultParams for application_launch...
tree
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commitdiff
2023-06-08
Ben Soares
Merge branch 'develop' into task/JAL-4001_migrate_googl...
tree
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commitdiff
2023-06-08
Ben Soares
JAL-3416 FlatLaf SystemInfo failing in JalviewJS. ...
tree
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commitdiff
2023-06-08
Ben Soares
Merge branch 'develop' into task/JAL-4001_migrate_googl...
tree
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commitdiff
2023-06-07
Ben Soares
JAL-4001 Javadoc for the method to use
tree
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commitdiff
2023-06-07
James Procter
JAL-4195 add exception handling for all image output...
tree
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commitdiff
2023-06-07
James Procter
Merge branch 'patch/JAL-4195_cli_eps_export_npe' into...
tree
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commitdiff
2023-06-07
James Procter
JAL-4195 catch thrown exceptions (if any) during image...
tree
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commitdiff
2023-06-07
Ben Soares
Merge branch 'develop' into task/JAL-4001_migrate_googl...
tree
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commitdiff
2023-06-07
Ben Soares
JAL-4001 Added more params for application_launch
tree
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commitdiff
2023-06-07
Ben Soares
JAL-4001 removed a test param
tree
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commitdiff
2023-06-07
Ben Soares
JAL-4001 GA4 tracking is now ENABLED. Currently loggin...
tree
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commitdiff
2023-06-07
James Procter
JAL-4195 tidy up desktop instances after creating them
tree
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commitdiff
2023-06-06
James Procter
JAL-4195 report full stack trace for exceptions raised...
tree
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commitdiff
2023-06-06
James Procter
JAL-4160 --colour can now take user defined scheme...
tree
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commitdiff
2023-06-06
James Procter
JAL-4160 JAL-4195 wait around until alignFrame calculat...
tree
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commitdiff
2023-06-06
James Procter
JAL-1551 formatting and javadoc for ArgParser rather...
tree
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commitdiff
2023-06-06
James Procter
JAL-629 - remove TODO from jalview.bin.Jalview since...
tree
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commitdiff
2023-06-06
James Procter
JAL-4195 Debug message indicating creation of an image...
tree
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commitdiff
2023-06-06
James Procter
JAL-1551 a bit of javadoc for Jalview.testoutput methods
tree
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commitdiff
2023-06-05
Ben Soares
JAL-4001 debugging statements
tree
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commitdiff
2023-06-05
Ben Soares
JAL-4001 untested GA4 client code
tree
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commitdiff
2023-06-05
Ben Soares
JAL-4001 most of google analytics client
tree
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commitdiff
2023-06-05
Ben Soares
JAL-4001 start of GA4 client class
tree
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commitdiff
2023-06-02
Ben Soares
Merge branch 'develop' into task/JAL-4001_migrate_googl...
tree
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commitdiff
2023-06-01
Ben Soares
Merge branch 'develop' into improvement/JAL-4193_cl_arg...
tree
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commitdiff
2023-06-01
Ben Soares
Merge branch 'develop' into features/r2_11_2_alphafold...
tree
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commitdiff
2023-06-01
Ben Soares
JAL-629 fixing test EBIAlphaFoldTest.checkImportPAEToSt...
tree
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commitdiff
2023-06-01
Ben Soares
JAL-4001 Changed title+message to MessageManager
tree
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commitdiff
2023-06-01
Ben Soares
JAL-4193 JAL-4194 sessionProperties layer in Cache...
tree
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commitdiff
2023-06-01
James Procter
Merge branch 'develop' into features/JAL-4134_use_annot...
tree
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commitdiff
2023-06-01
James Procter
JAL-4134 properly resolve positions in associated align...
features/JAL-4134_use_annotation_row_for_colours_and_groups
tree
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commitdiff
2023-05-30
James Procter
JAL-4134 repaint the tree or alignment view(s) when...
tree
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commitdiff
2023-05-30
James Procter
JAL-4134 highlight selected column nodes on the linked...
tree
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commitdiff
2023-05-30
Ben Soares
JAL-629 JAL-4121 Added documentation to Help docs and...
tree
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commitdiff
2023-05-30
Ben Soares
JAL-629 Better formatting of Arg.Opt options in usage...
tree
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commitdiff
2023-05-30
Ben Soares
JAL-4121 slight refactoring of method name and added...
tree
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commitdiff
2023-05-29
James Procter
JAL-4190 - escape clears selected nodes
tree
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commitdiff
2023-05-29
James Procter
JAL-4134 JAL-2349 test & fixed implementation(ish)...
tree
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commitdiff
2023-05-29
James Procter
Merge branch 'develop' into features/JAL-4134_use_annot...
tree
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commitdiff
2023-05-27
Ben Soares
JAL-4121 Added a NPE check caught in tests. Added ...
tree
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commitdiff
2023-05-27
Ben Soares
JAL-4121 Store Arg.Opts in bootstrapArgs. Change Opt...
tree
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commitdiff
2023-05-26
Ben Soares
JAL-4125 Fixed non-closing external viewers, also added...
tree
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commitdiff
2023-05-26
James Procter
JAL-4134 internationalise popup menu entries and show...
tree
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commitdiff
2023-05-26
James Procter
JAL-1556 fix bad import
tree
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commitdiff
2023-05-26
James Procter
Merge branch 'develop' into features/JAL-4134_use_annot...
tree
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commitdiff
2023-05-26
James Procter
JAL-1556 initial implementation - no tests as yet but...
tree
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commitdiff
2023-05-26
Ben Soares
JAL-629 dispose of non-displaying StructureChooser...
tree
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commitdiff
2023-05-26
Ben Soares
Merge branch 'develop' into feature/JAL-3416_update_to_...
feature/JAL-3416_update_to_flatlaf_3.1.1_with_unpacked_native_libraries
tree
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commitdiff
2023-05-25
Ben Soares
JAL-3416 JAL-3820 FlatLaf default for everyone, includi...
tree
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commitdiff
2023-05-25
James Procter
JAL-4134 popup menu and annotation row property to...
tree
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commitdiff
2023-05-25
Ben Soares
JAL-3820 JAL-3830 improvements to script launching...
tree
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commitdiff
2023-05-25
James Procter
JAL-2381 don’t need to set description, dbrefs etc...
tree
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commitdiff
2023-05-25
James Procter
JAL-2381 copy and paste sequence also copies contact...
tree
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commitdiff
2023-05-25
Ben Soares
JAL-3820 Create and use 'Jalview app' symblinks to...
tree
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commitdiff
2023-05-25
Ben Soares
JAL-4186 Turn JvOptionPane Callable<Void> handlers...
tree
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commitdiff
2023-05-24
Ben Soares
JAL-4186 attempts to work in jalviewjs, still not working
tree
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commitdiff
2023-05-24
Ben Soares
JAL-4186 fix dialog. broken in JalviewJS
tree
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commitdiff
2023-05-24
Ben Soares
JAL-3416 slightly improved colours for tabber pane...
tree
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commitdiff
2023-05-23
Ben Soares
JAL-629 Updated help docs and fixed structure image...
tree
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commitdiff
2023-05-23
Ben Soares
JAL-629 Added --structureimage code and formatting...
tree
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commitdiff
2023-05-22
Ben Soares
JAL-629 --structureimage with formatting args.
tree
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commitdiff
2023-05-22
James Procter
JAL-4134 map between column and node selections better...
tree
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commitdiff
2023-05-22
James Procter
JAL-4134 efficiency improvement
tree
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commitdiff
2023-05-22
James Procter
JAL-629 javadoc on StructureSelectionManager.computeMapping
tree
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commitdiff
2023-05-22
James Procter
JAL-4134 only build tree when showing it in the tree...
tree
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commitdiff
2023-05-22
James Procter
JAL-4134 catch NPE - though in principle this should...
tree
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commitdiff
2023-05-22
James Procter
Merge branch 'JAL-1551_2_11_3_spotlett' into features...
tree
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commitdiff
2023-05-22
James Procter
JAL-1551 spotless
tree
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commitdiff
2023-05-21
Ben Soares
JAL-629 Clarify sections of arguments with --help-all...
tree
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commitdiff
2023-05-20
Ben Soares
JAL-4187 JAL-629 JAL-3830 small adjustments after furth...
tree
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commitdiff
2023-05-20
Ben Soares
JAL-3416 Ensure setFrameIcon(null) is set for remaining...
tree
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commitdiff
2023-05-20
Ben Soares
JAL-3416 Removed another internal Frame icon from title bar
tree
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commitdiff
2023-05-20
Ben Soares
JAL-4187 JAL-629 JAL-3830 adjustments to Cygwin and...
tree
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commitdiff
2023-05-20
Ben Soares
JAL-4160 JAL-3830 Improve jalview.bin.Launcher for...
tree
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commitdiff
2023-05-20
Ben Soares
JAL-4160 JAL-3830 Improve jalview.bin.Launcher for...
tree
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commitdiff
2023-05-19
James Procter
Merge branch 'develop' into features/JAL-4134_use_annot...
tree
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commitdiff
2023-05-19
Ben Soares
JAL-4187 JAL-629 JAL-3830 Fix ArgParser to check for...
tree
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commitdiff
2023-05-19
James Procter
JAL-1551 spotlessApply
tree
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commitdiff
2023-05-19
James Procter
JAL-1551 spotlessApply
tree
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commitdiff
2023-05-19
Ben Soares
JAL-629 Added Arg.Types and additional --help-type...
tree
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commitdiff
2023-05-18
James Procter
JAL-4134 support recovery of mapped positions for raw...
tree
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commitdiff
2023-05-18
James Procter
JAL-4134 colour by annotation needs distinct annotation...
tree
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commitdiff
2023-05-18
Ben Soares
JAL-629 fixes to typed args
tree
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commitdiff
2023-05-18
James Procter
JAL-4134 column grouping model and methods moved to...
tree
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commitdiff
2023-05-18
Ben Soares
JAL-629 Added 'Type' to args and argvalues
tree
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commitdiff
2023-05-18
James Procter
JAL-4134 formatting
tree
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commitdiff
2023-05-18
James Procter
JAL-4134 properly specify BinaryNode as a typed generic...
tree
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commitdiff
2023-05-17
Ben Soares
JAL-629 Tidy up tests and replaced methods before merge...
tree
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commitdiff
2023-05-17
Ben Soares
Merge branch 'develop' into features/r2_11_2_alphafold...
tree
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commitdiff
2023-05-17
James Procter
JAL-4184 export description line in stockholm
patch/JAL-4184_description_stockholm
tree
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commitdiff
2023-05-16
Ben Soares
JAL-629 Ensure precedence of named linked ID values...
tree
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commitdiff
2023-05-16
James Procter
JAL-4089 - if no centerViewOn commands are given, don...
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commitdiff
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