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JAL-3477 Added -help text for jvmmempc and jvmmemmax. Fixed typo and slight rewording...
[jalview.git] / test / jalview /
2020-07-28 Jim ProcterJAL-3615 update tests for Rfam/Pfam specific gzip endpoints tree | commitdiff
2020-07-02 gmungocJAL-2656 JAL-3615 check response headers to test for... tree | commitdiff
2020-07-02 gmungocJAL-3615 used gzip endpoints for Pfam and Rfam tree | commitdiff
2020-06-29 Jim ProcterJAL-3493 failing test - creates a highlight and column... tree | commitdiff
2020-06-25 gmungocJAL-3518 pull up [get|list]ResidueAttributes to Structu... tree | commitdiff
2020-06-23 gmungocJAL-3518 separation of ChimeraXManager, pull up of... tree | commitdiff
2020-06-01 gmungocJAL-3518 test result corrected tree | commitdiff
2020-06-01 gmungocJAL-3518 add alwaysRun = true [sigh] tree | commitdiff
2020-06-01 gmungocJAL-3518 more test coverage for structure commands tree | commitdiff
2020-05-29 gmungocJAL-2422 test updated tree | commitdiff
2020-05-29 gmungocMerge branch 'feature/JAL-3551Pymol' into develop tree | commitdiff
2020-05-26 gmungocJAL-1889 disable test failing on build server tree | commitdiff
2020-05-21 gmungocJAL-3551 copy Jalview features to Pymol 'p' (with pull... tree | commitdiff
2020-05-19 gmungocJAL-3621 corrected sequence feature sort and test tree | commitdiff
2020-05-19 gmungocJAL-3621 corrected sequence feature sort and test tree | commitdiff
2020-05-19 gmungocMerge branch 'develop' into feature/JAL-3551Pymol tree | commitdiff
2020-05-18 gmungocJAL-3529 test updated for revised signature of getDBRefs() tree | commitdiff
2020-05-18 gmungocMerge branch 'Jalview-JS/develop' into develop tree | commitdiff
2020-05-15 gmungocJAL-2422 JAL-3551 unit tests updated for code changes tree | commitdiff
2020-05-15 gmungocJAL-3551 pull up Close Viewer dialog to base class tree | commitdiff
2020-05-11 gmungocJAL-2422 JAL-3551 viewer text/variables generalised... tree | commitdiff
2020-05-01 gmungocJAL-3613 check sequence overlap when matching search... tree | commitdiff
2020-04-25 gmungocMerge branch 'develop' into feature/JAL-3551Pymol tree | commitdiff
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3574filterByPOS' into documentati... tree | commitdiff
2020-04-21 gmungocJAL-3210 try adding setup method to unit test failing... tree | commitdiff
2020-04-21 gmungocJAL-1889 corrected wait for consensus to be calculated tree | commitdiff
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3567virtualFeatureCoordinates... tree | commitdiff
2020-04-21 Jim ProcterJAL-3567 translated rather than imputed peptide tree | commitdiff
2020-04-17 gmungocJAL-3567 unit tests for linked feature tooltips tree | commitdiff
2020-04-16 gmungocJAL-3567 adjust layout of linked feature report, unit... tree | commitdiff
2020-04-16 gmungocJAL-3567 report mapped location for virtual features... tree | commitdiff
2020-04-14 Jim ProcterMerge branch 'bug/JAL-3529_uniprotidsinstockholm' into... tree | commitdiff
2020-04-14 Jim ProcterJAL-3529 revert ordering of DBRef addition so it reflec... tree | commitdiff
2020-04-14 Jim ProcterJAL-3597 improved Memory test suite by detecting base... tree | commitdiff
2020-04-13 gmungocJAL-3574 test coverage corners bug/JAL-3574filterByPOS tree | commitdiff
2020-04-13 gmungocJAL-3574 Matcher with integer/long value pattern (e... tree | commitdiff
2020-03-31 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2020-03-31 gmungocJAL-1889 better (?) wait for Conservation thread tree | commitdiff
2020-03-30 gmungocJAL-3210 test updated for changed signature of Sequence... tree | commitdiff
2020-03-30 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2020-03-20 Jim ProcterJAL-3562 exclude testNG groups from a build via -Ptestn... tree | commitdiff
2020-03-16 gmungocJAL-3551 the correct PyMOL colour by chain command tree | commitdiff
2020-03-13 gmungocJAL-3551 working proof of concept of Jalview driving... tree | commitdiff
2020-03-09 gmungocMerge branch 'develop' into feature/JAL-2422ChimeraX tree | commitdiff
2020-03-09 gmungocJAL-3528 unit tests added for failed lookup, Javadoc tree | commitdiff
2020-03-06 gmungocJAL-3187 unit test for findComplementFeaturesAtResidue tree | commitdiff
2020-03-06 gmungocMerge branch 'feature/JAL-3468featureDescriptionEllipsi... tree | commitdiff
2020-03-06 gmungocJAL-3468 i18n and additional unit tests feature/JAL-3468featureDescriptionEllipsis tree | commitdiff
2020-03-06 Ben SoaresJAL-3529 improved regex in Stockholm UNIPROT accession... tree | commitdiff
2020-03-04 Ben SoaresJAL-3468 Fixed tests and added test for max-length... tree | commitdiff
2020-03-03 gmungocJAL-3518 more pull up / test coverage of structure... tree | commitdiff
2020-02-28 gmungocJAL-3518 basic refactoring / pull up of superposeStruct... tree | commitdiff
2020-02-27 Jim ProcterJAL-3412 patch for failing test tree | commitdiff
2020-02-27 Jim ProcterMerge branch 'bug/JAL-3412idWidthDiscrepancy' into... bug/JAL-3412idWidthDiscrepancy tree | commitdiff
2020-02-27 Jim ProcterMerge branch 'bug/JAL-3296changeStartInvalidateCursor... tree | commitdiff
2020-02-21 gmungocJAL-3518 more extraction of ChimeraX commands as overrides tree | commitdiff
2020-02-20 gmungocJAL-2422 pull-up refactoring of structure commands... tree | commitdiff
2020-02-18 Ben SoaresJAL-3449 merge from develop tree | commitdiff
2020-02-18 Jim ProcterJAL-3529 test for AC <Uniprot/EMBL> rather than DR... tree | commitdiff
2020-02-18 Jim ProcterJAL-3529 assert Uniprot refs must be provided as primar... tree | commitdiff
2020-02-17 Ben SoaresJAL-3341 Increase number of lines looked at by test... tree | commitdiff
2020-02-17 Jim ProcterJAL-3536 failing test and test data tree | commitdiff
2020-02-14 Jim ProcterJAL-3531 failing test tree | commitdiff
2020-02-14 Jim ProcterJAL-3529 more detailed asserts to detect whitespace... tree | commitdiff
2020-02-14 Jim ProcterJAL-3529 failing test for bug tree | commitdiff
2020-02-04 gmungocJAL-2422 pull up refactoring in preparation for Chimera... tree | commitdiff
2020-01-29 Ben SoaresJAL-3341 Increase number of lines looked at by test... tree | commitdiff
2020-01-28 gmungocJAL-3341 debug for failing unit test bug/JAL-3341unitTestFails tree | commitdiff
2020-01-28 gmungocMerge branch 'feature/JAL-3121gffAttributeMap' into... tree | commitdiff
2020-01-28 gmungocJAL-2422 ChimeraX added to Preferences tree | commitdiff
2020-01-24 gmungocJAL=3121 more data format validation/tests, help text... feature/JAL-3121gffAttributeMap tree | commitdiff
2020-01-23 gmungocJAL-3121 'attributes map' in GFF3 without special ... tree | commitdiff
2020-01-16 Jim ProcterMerge branch 'improvement/JAL-3449_add_install4j_instal... tree | commitdiff
2020-01-14 gmungocJAL-2422 proof of concept adaptations for ChimeraX... tree | commitdiff
2019-12-13 gmungocJAL-2422 basic proof of concept of ChimeraX opened... tree | commitdiff
2019-12-12 Jim ProcterJAL-2305 moved failing CrossRef tests to Functional_Fai... tree | commitdiff
2019-11-18 Ben SoaresJAL-3477 New sensible default decisions on memory,... tree | commitdiff
2019-11-01 gmungocJAL-3468 unit tests updated for changes tree | commitdiff
2019-10-10 Ben SoaresJAL-3210 Two fixed tests (previously not compiling) tree | commitdiff
2019-10-10 Ben SoaresJAL-3210 Two fixed tests (previously not compiling) tree | commitdiff
2019-10-08 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2019-08-22 gmungocJAL-3121 slightly cleaner parsing of, and unit test... tree | commitdiff
2019-08-22 gmungocMerge branch 'develop' into feature/JAL-3121gffAttributeMap tree | commitdiff
2019-08-22 gmungocJAL-3187 case-insensitive codon variant calculation tree | commitdiff
2019-08-22 gmungocJAL-3121 round trip GFF attributes including map-valued... tree | commitdiff
2019-08-19 gmungocJAL-3412 calculateIdWidth - more consistency, constants... tree | commitdiff
2019-08-09 gmungocJAL-3187 removal of variant feature (non-virtual) trans... tree | commitdiff
2019-07-26 gmungocMerge branch 'features/JAL-3375vcfValidation' into tree | commitdiff
2019-07-26 gmungocJAL-1793 only decode specific special characters in... tree | commitdiff
2019-07-26 gmungocJAL-3376 capture VCF POS, ID, QUAL, FILTER as feature... features/JAL-3375vcfValidation tree | commitdiff
2019-07-26 gmungocJAL-3375 format validate VCF Integer and Float fields tree | commitdiff
2019-07-25 gmungocJAL-3375 ignore '.' values for VCF data tree | commitdiff
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge tree | commitdiff
2019-07-10 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures tree | commitdiff
2019-07-08 gmungocJAL-3187 derived peptide variants tweaks and tests tree | commitdiff
2019-07-05 gmungocJAL-1793 apply URL decoding when saving VCF attribute... tree | commitdiff
2019-06-26 Jim ProcterJAL-3332 test to check for duplicate db sources and... tree | commitdiff
2019-06-26 Jim ProcterJAL-3330 JAL-3332 relocate and simplify BeforeClass... tree | commitdiff
2019-06-26 Jim ProcterJAL-3330 test to verify sub/attributeName array is... tree | commitdiff
2019-06-18 Jim ProcterMerge branch 'bug/JAL-2830_editManglesDatasetSequence... tree | commitdiff
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