Merge branch 'documentation/JAL-3111_release_211' into develop
[jalview.git] / test /
2019-06-18 Jim ProcterMerge branch 'bug/JAL-2830_editManglesDatasetSequence...
2019-06-07 gmungocJAL-2738 use GeneLocus extends DBRefEntry to hold chrom...
2019-05-27 gmungocJAL-3141 test file in test folder not examples
2019-05-24 Ben SoaresJAL-3141 Fixed tests
2019-05-24 Ben SoaresJAL-3141 Reworked a lot of BackupFiles to allow the...
2019-05-21 gmungocJAL-3273 small correction to expected result calculation
2019-05-02 gmungocJAL-3244 renamed Platform method for clarity bug/JAL-3244jmolWindows
2019-05-01 gmungocJAL-3244 ignore file path separator when comparing...
2019-04-29 gmungocJAL-2738 JAL-2743 update unit test to match new VCF...
2019-04-23 Jim ProcterMerge branch 'develop' into bug/JAL-3224_getdown_change...
2019-04-16 Jim ProcterJAL-3130 tidy up system.output jims/JAL-3130_Java11_Gradle_publishing
2019-04-16 Jim ProcterJAL-3130 call Jalview via the Test JVM’s JAVA_HOME...
2019-04-16 Jim ProcterJAL-3130 JAL-1889 reportCurrentWorkingDirectory test...
2019-04-16 Jim ProcterJAL-3130 JAL-1889 report absolute paths for CommandLine...
2019-04-16 Jim ProcterJAL-3130 JAL-1889 report absolute paths for CommandLine...
2019-04-16 Jim ProcterJAL-3130 JAL-1889 report absolute paths for CommandLine...
2019-04-16 Jim ProcterReinstate imports from "JAL-1889 JAL-3130 patch broken...
2019-04-16 Jim ProcterJAL-1189 JAL-3130 patch broken tests
2019-04-12 Jim ProcterJAL-3130 specify module list when launching new Jalview...
2019-04-11 Jim ProcterMerge branch 'develop' into task/JAL-3130_Java_11_inves...
2019-04-02 gmungocJAL-3218 allow both Hide and Reveal in scale panel... bug/JAL-3218scalePanelPopups
2019-03-28 gmungocJAL-1889 patch for failing isControDown test on build...
2019-03-28 gmungocMerge branch 'feature/JAL-3181linkOrdering' into develop
2019-03-25 gmungocJAL-2717 adjusted code so default correctly returned...
2019-03-23 gmungocJAL-1889 remove debug logging, add updateLayout()
2019-03-21 gmungocJAL-1889 better debug logging
2019-03-21 gmungocJAL-1889 added belt and braces deleteOnExit() to test...
2019-03-21 gmungocJAL-1889 correct props param, remove dasserver, output...
2019-03-21 gmungocJAL-1889 more diagnostics for CommandLineOperations
2019-03-21 gmungocJAL-1889 diagnostics for failing test on server
2019-03-20 Ben SoaresJAL-3130 Lots of deprecation fixes. See utils/deprecat...
2019-03-20 gmungocJAL-3212 unit test and fix for Scale Panel bug
2019-03-19 Ben SoaresJAL-3130 Merge of JAL-3130_Java_11_investigations-Ben...
2019-03-12 gmungocJAL-1270 missing 'alwaysRun=true' added to setup/teardown
2019-03-11 gmungocMerge branch 'develop' into merge/JAL-3127
2019-03-11 gmungocJAL-1270 JAL-2416 JAL-2839 set alwaysRun=true in test...
2019-03-11 gmungocJAL-3127 fix faulty merge
2019-03-11 gmungocMerge branch 'develop' into merge/JAL-3127
2019-03-11 gmungocMerge branch 'feature/JAL-2250colourAllGroups' into...
2019-03-11 gmungocJAL-3201 restore group colours correctly from project feature/JAL-2250colourAllGroups
2019-03-11 gmungocMerge branch 'feature/JAL-3127_seqidChainshading' into...
2019-03-11 gmungocJAL-3206 strict above/below threshold test restored
2019-03-07 gmungocJAL-2717 JAL-2360 belated unit tests for ColourMenuHelper
2019-03-07 gmungocMerge branch 'feature/JAL-3205symmetricCalc' into develop
2019-03-05 gmungocMerge remote-tracking branch 'origin/features/JAL-2620a...
2019-03-05 gmungocMerge remote-tracking branch 'origin/bug/JAL-2839findWi...
2019-03-05 gmungocJAL-3049 redo (part of) commit 92bc328
2019-03-05 gmungocMerge remote-tracking branch 'origin/bug/JAL-3049colour...
2019-03-05 gmungocJAL-3205 added a delta parameter to Matrix.equals() feature/JAL-3205symmetricCalc
2019-03-04 gmungocMerge remote-tracking branch 'origin/bug/JAL-3082select...
2019-03-04 gmungocJAL-3206 avoid divide by zero when threshold is graphMi...
2019-03-04 gmungocMerge branch 'bug/JAL-3099alignmentVisibleWidth' into...
2019-03-04 gmungocMerge remote-tracking branch 'origin/tasks/JAL-3035_rem...
2019-03-04 gmungocMerge branch 'bug/JAL-3120restoreFeatureColour' into...
2019-03-04 gmungocJAL-3205 worked examples in unit test for symmetric...
2019-03-03 gmungocJAL-3205 one more unit test case
2019-03-03 gmungocJAL-3205 faster calculation with symmetric score matrix
2019-03-01 gmungocMerge branch 'bug/JAL-2791exportFilteredFeature' into...
2019-03-01 gmungocMerge branch 'feature/JAL-3093wrappedModeTooltips'...
2019-03-01 gmungocJAL-3093 unit test adapts to actual number of annotatio... feature/JAL-3093wrappedModeTooltips
2019-03-01 gmungocMerge branch 'feature/JAL-3093wrappedModeTooltips'...
2019-03-01 gmungocMerge branch 'feature/JAL-1244stretchStatusMsg' into...
2019-03-01 gmungocMerge branch 'bug/JAL-3139colocatedFeatures' into develop
2019-03-01 gmungocMerge branch 'bug/JAL-3164complementOverview' into...
2019-03-01 gmungocMerge branch 'feature/intervalStoreJ' into merge/JAL...
2019-03-01 gmungocJAL-3140 reduced coupling to intervalstore.jar feature/intervalStoreJ
2019-02-28 gmungocMerge branch 'feature/JAL-3143ensemblJSON' into merge...
2019-02-28 gmungocMerge remote-tracking branch 'origin/feature/JAL-3141_b...
2019-02-28 Jim ProcterMerge branch 'feature/JAL-3141_backupfiles_for211'... merge/develop_feature/JAL-3141_backupfiles_for211
2019-02-26 gmungocJAL-3201 group colour schemes distinct instances
2019-02-25 gmungocJAL-3200 fast lookup of DSSP3 notation
2019-02-24 gmungocJAL-3198 SequenceGroup 'bulk constructor' without dupli...
2019-02-22 gmungocJAL-2738 don't set AF as feature score
2019-02-04 gmungocJAL-3143 update unit test for ID -> id change feature/JAL-3143ensemblJSON
2019-01-28 Ben SoaresJAL-3141 fixed test
2019-01-24 Ben SoaresJAL-3141 Eclipse re-formatting of file
2019-01-21 Ben SoaresJAL-3141 Fixed tests for new placement of suffix after...
2019-01-18 Jim ProcterMerge branch 'feature/JAL-3063jaxbNoCastor' into featur...
2019-01-18 Jim ProcterMerge branch 'develop' into feature/JAL-3063jaxbNoCastor
2019-01-17 Jim ProcterJAL-3116 clear out whitespace when materialising Sequen...
2019-01-16 Jim ProcterMerge branch 'feature/JAL-3063jaxbNoCastor' into develop
2019-01-16 Jim ProcterMerge branch 'features/pca_jaxb_datasetrefs_JAL-3171_JA...
2019-01-15 Jim ProcterJAL-1767 test that changing view association for PCA... features/pca_jaxb_datasetrefs_JAL-3171_JAL-3063_JAL-1767
2019-01-15 Jim ProcterJAL-1767 patch buggy PCA view association test
2019-01-09 Ben SoaresJAL-3141 removed redundant method to tests
2019-01-09 Jim ProcterJAL-1767 failing test to check if the PCA view associat...
2019-01-08 Ben SoaresJAL-3141 Made some suggested changes from code review
2019-01-04 gmungocJAL-3181 refactor: extracted buildLinkMenu() for testab... feature/JAL-3181linkOrdering
2019-01-04 gmungocJAL-3181 simplified code and test
2019-01-03 gmungocJAL-3181 order link menu items
2019-01-03 gmungocJAL-1889 additional test for clover-added fields
2019-01-03 gmungocJAL-1889 ignore 'synthetic' fields added for jacoco
2018-12-19 Jim ProcterMerge branch 'features/JAL-1767pcaInProject' into bug...
2018-12-19 gmungocJAL-3178 include non-positional features in their group... bug/JAL-2791exportFilteredFeature
2018-12-17 Jim ProcterMerge branch 'bug/JAL-2864nullOverviewCanvas' into...
2018-12-17 Jim ProcterMerge branch 'bug/JAL-2750' into develop
2018-12-17 Jim ProcterMerge branch 'develop' into bug/JAL-2830_editManglesDat...
2018-12-17 Jim ProcterJAL-2830 reinstate toUppercase for new dataset sequence...
2018-12-17 Jim ProcterMerge branch 'task/JAL-3174_fixed_filename_tests' into...
2018-12-17 Jim ProcterJAL-3174 backout un-needed stacktrace for exception...
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