| 2004-12-17 |
amwaterhouse | Fixed bug in editing by group
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commit | commitdiff | tree |
| 2004-12-17 |
amwaterhouse | Hide apply and undo buttons
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commit | commitdiff | tree |
| 2004-12-17 |
amwaterhouse | Use the isGap method in utils
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commit | commitdiff | tree |
| 2004-12-16 |
amwaterhouse | Output new alignment bug fixed
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commit | commitdiff | tree |
| 2004-12-16 |
amwaterhouse | ilen and jlen no longer +1
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commit | commitdiff | tree |
| 2004-12-16 |
amwaterhouse | Remove redundancy implemented
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | colours are right, but not the conservation bit!!
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | no need to send sequence to determine residue colour
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | Added for the moment, only used by ClustalxColourScheme
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | No need to sened sequence to determine residue colour
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | isGap method implemented in utils, and optimized
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | isGap method implemented in utils
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | GSlider replaces GConservationIncrementPanel
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | no more group editing mode. clustal implemented
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | Displays full id with the help of nowrap
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | New class
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | ColourScheme no longer requires sequence
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | End of GroupEditing, GroupDefiningMode!!!!!
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | Register with paintrefresher
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | If selection altered, update RubberbandGroup
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | All colours added, also sequence menu added
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | Right mouse brings up Popupmenu
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | ColourScheme findColour no longer needs sequence
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | If selection altered, update Rubberband group also
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | REpainting after graph panel setVisible fixed
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | SliderPanel added, edit is by mouse click
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | Removed, SliderPanel replaces this class
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commit | commitdiff | tree |
| 2004-12-15 |
amwaterhouse | isGap method added to utils
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Dont try{}catch the findColour method, lets fix this now
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | HTML ouput is now identical to onscreen view
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Enable PID menuitem
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | PID Colour scheme now operational!
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Add Jims name!
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Getcolours is not needed ????
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Scalepanel has new constructor
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Increment panel must call globalcolour or seqeuncegroup...
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Allow userdefined colours for groups
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Can now select groups using column selection
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Userdefinedcolours works for groups as well
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Hastable is not used anywhere
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | New class for defining groups and selections
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Copy, cut and move now done via popup menu
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Selection of sequences is continuous
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Drawing of group and rubberband corrected
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Sequence selection now done via popup menu
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | must allow for alignment width
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Copy, move and delete now done via Popup menu
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | AddOrRemove function added, start and end res fixed
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | If groups doesnt contain group, addition is allowed
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Hashtable size must allow for total-start
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commit | commitdiff | tree |
| 2004-12-14 |
amwaterhouse | Choosing sort again reverses the sort order
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commit | commitdiff | tree |
| 2004-12-10 |
amwaterhouse | No longer exclusive to SequenceGroups
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commit | commitdiff | tree |
| 2004-12-10 |
amwaterhouse | Now allows multi coloured HTML output
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commit | commitdiff | tree |
| 2004-12-10 |
amwaterhouse | Colours set globally in viewport
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commit | commitdiff | tree |
| 2004-12-10 |
amwaterhouse | Looks to viewportfor global settings
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commit | commitdiff | tree |
| 2004-12-10 |
amwaterhouse | Addition of rubberband
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commit | commitdiff | tree |
| 2004-12-10 |
amwaterhouse | Now draws group, rubberband
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commit | commitdiff | tree |
| 2004-12-10 |
amwaterhouse | sequence selection modified
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commit | commitdiff | tree |
| 2004-12-10 |
amwaterhouse | SELECTED IDS COLOURED LIGHT GRAY
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commit | commitdiff | tree |
| 2004-12-10 |
amwaterhouse | COnservationSelected and rubberband method setup
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commit | commitdiff | tree |
| 2004-12-10 |
amwaterhouse | Colour scheme new global implementation
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commit | commitdiff | tree |
| 2004-12-10 |
amwaterhouse | Colour etc is now globally set
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commit | commitdiff | tree |
| 2004-12-10 |
amwaterhouse | Check if sequence is in group before adding
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commit | commitdiff | tree |
| 2004-12-10 |
amwaterhouse | Use cross platform lookandfeel
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | Dont use updateResidueView
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | Space char added
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | remove import of jbgui
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | default gap char is -
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | wont work at present, renderer is null
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | remove splashscreenclosing line
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | Preparing for groupselect mode
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | av.charWidth is now an int
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | send SequenceGroup to renderer
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | charWidth is now an int
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | Text alignment changes
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | Allow operation if no groups exist
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | Colourscheme is null
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | invalidate and validate after closing splashscreen
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | Space added
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | Add globalcolourscheme
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | Sort groups bug fixed
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | Now has res start, res end
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commit | commitdiff | tree |
| 2004-12-03 |
amwaterhouse | default gap char is -. Getting ready for group select...
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commit | commitdiff | tree |
| 2004-12-02 |
amwaterhouse | Search on residue position and within selection
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commit | commitdiff | tree |
| 2004-12-02 |
amwaterhouse | splashscreen activated
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commit | commitdiff | tree |
| 2004-12-02 |
amwaterhouse | removed divider from edit menu
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commit | commitdiff | tree |
| 2004-12-01 |
amwaterhouse | Search menu added
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commit | commitdiff | tree |
| 2004-12-01 |
amwaterhouse | If search results==null, displaySearch is false
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commit | commitdiff | tree |
| 2004-12-01 |
amwaterhouse | When closed, highlightSearchResults( null )
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commit | commitdiff | tree |
| 2004-12-01 |
amwaterhouse | show search results added
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commit | commitdiff | tree |
| 2004-12-01 |
amwaterhouse | showinternal***dialog
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commit | commitdiff | tree |
| 2004-12-01 |
amwaterhouse | search function added
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commit | commitdiff | tree |
| 2004-12-01 |
amwaterhouse | rendergaps(boolean) function added
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commit | commitdiff | tree |
| 2004-12-01 |
amwaterhouse | showInternalInputDialog
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commit | commitdiff | tree |
| 2004-12-01 |
amwaterhouse | Dont render gaps in overview panel
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commit | commitdiff | tree |
| 2004-12-01 |
amwaterhouse | Brackets moved
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commit | commitdiff | tree |
| 2004-12-01 |
amwaterhouse | Find routine added
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commit | commitdiff | tree |
| 2004-12-01 |
amwaterhouse | Char to string comparison
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commit | commitdiff | tree |
| 2004-12-01 |
amwaterhouse | Gapchar is a char, not string
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commit | commitdiff | tree |
| 2004-12-01 |
amwaterhouse | Set gap chararcter replaces all existing gap chars
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commit | commitdiff | tree |
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