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2004-12-03	amwaterhouse	Now has res start, res end	commit \| commitdiff \| tree
2004-12-03	amwaterhouse	default gap char is -. Getting ready for group select...	commit \| commitdiff \| tree
2004-12-02	amwaterhouse	Search on residue position and within selection	commit \| commitdiff \| tree
2004-12-02	amwaterhouse	splashscreen activated	commit \| commitdiff \| tree
2004-12-02	amwaterhouse	removed divider from edit menu	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	Search menu added	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	If search results==null, displaySearch is false	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	When closed, highlightSearchResults( null )	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	show search results added	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	showinternal***dialog	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	search function added	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	rendergaps(boolean) function added	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	showInternalInputDialog	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	Dont render gaps in overview panel	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	Brackets moved	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	Find routine added	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	Char to string comparison	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	Gapchar is a char, not string	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	Set gap chararcter replaces all existing gap chars	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	Modified output to reduce HTML file size	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	Find added to edit menu	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	New class	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	New function to highlight text search results	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	New classes	commit \| commitdiff \| tree
2004-12-01	amwaterhouse	Space changes	commit \| commitdiff \| tree
2004-11-22	amwaterhouse	About info updated	commit \| commitdiff \| tree
2004-11-19	amwaterhouse	set display boxes must be applied to groups	commit \| commitdiff \| tree
2004-11-19	amwaterhouse	printing now uses printer fonts	commit \| commitdiff \| tree
2004-11-19	amwaterhouse	if sequence is in selection when removed, remove from...	commit \| commitdiff \| tree
2004-11-19	amwaterhouse	doesn't create an image for drawing, important for...	commit \| commitdiff \| tree
2004-11-19	amwaterhouse	checks for new selection before adding a new group	commit \| commitdiff \| tree
2004-11-19	amwaterhouse	returns color.white if residueBoxColour is null	commit \| commitdiff \| tree
2004-11-19	amwaterhouse	Moved colour text menu	commit \| commitdiff \| tree
2004-11-18	amwaterhouse	not used at present	commit \| commitdiff \| tree
2004-11-18	amwaterhouse	New files	commit \| commitdiff \| tree
2004-11-18	amwaterhouse	space removed	commit \| commitdiff \| tree
2004-11-18	amwaterhouse	print menu item added	commit \| commitdiff \| tree
2004-11-18	amwaterhouse	setcolour in seqpanel now needs to know about conservation	commit \| commitdiff \| tree
2004-11-18	amwaterhouse	allow for printing	commit \| commitdiff \| tree
2004-11-18	amwaterhouse	try out graphics 2d	commit \| commitdiff \| tree
2004-11-18	amwaterhouse	remove import of analysis	commit \| commitdiff \| tree
2004-11-18	amwaterhouse	printing added	commit \| commitdiff \| tree
2004-11-18	amwaterhouse	allow printing and 3d viewer	commit \| commitdiff \| tree
2004-11-18	amwaterhouse	updates	commit \| commitdiff \| tree
2004-11-18	amwaterhouse	make variable public	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	remove jbgui import	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	remove system.out	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	Add only colours that currently work	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	new file	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	change names of space filling panel	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	ConservationColour added	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	New files	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	add fix if colour is white	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	Remove viewport from constructor	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	Make sure we're talking about the same alignment!	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	No need for viewport or colourtext in renderer	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	Initial size of overview	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	Halfway to wrapalignment,	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	Halfway to wrapalignment, shows swissprot file	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	New Class	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	New class	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	Show all hydrophobic residues	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	halfway to wrap alignment	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	Conservation colour in place	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	now has a name	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	initial colour of sequence is black	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	SequenceGroup may have name	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	don't use setdefaultlookandfeeldecorated, its buggy	commit \| commitdiff \| tree
2004-11-16	amwaterhouse	Removed spaces	commit \| commitdiff \| tree
2004-11-04	amwaterhouse	Adds sequence number to status bar	commit \| commitdiff \| tree
2004-11-04	amwaterhouse	Comment out all PID and frequency calcs for the moment	commit \| commitdiff \| tree
2004-11-04	amwaterhouse	Move drawing out of repaint method	commit \| commitdiff \| tree
2004-11-04	amwaterhouse	Only 4 or more sequences allowed for PCA	commit \| commitdiff \| tree
2004-11-04	amwaterhouse	White space change	commit \| commitdiff \| tree
2004-11-04	amwaterhouse	Allowed for addition of OverviewPanel	commit \| commitdiff \| tree
2004-11-04	amwaterhouse	OverviewPanel added	commit \| commitdiff \| tree
2004-11-04	amwaterhouse	Added OverviewPanel	commit \| commitdiff \| tree
2004-11-04	amwaterhouse	Text changes on labels	commit \| commitdiff \| tree
2004-11-04	amwaterhouse	removed import jbgui line	commit \| commitdiff \| tree
2004-11-02	amwaterhouse	PaintRefresher called after tree selection made	commit \| commitdiff \| tree
2004-11-02	amwaterhouse	Allow colouring of ids from tree selected groups	commit \| commitdiff \| tree
2004-11-02	amwaterhouse	Jalview Imported Sources	commit \| commitdiff \| tree

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