git://source.jalview.org / jalview.git / search
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
JAL-98 with the two types missing from last commit Profiles[I] !
2016-11-18 gmungocJAL-98 with the two types missing from last commit...
commit | commitdiff | tree
2016-11-17 gmungocJAL-98 ProfilesI container for profiles for columns
 commit | commitdiff | tree
2016-11-17 gmungocJAL-98 javadoc, third party acknowledgements (and very...
commit | commitdiff | tree
2016-11-16 gmungocJAL-2324 fix and tests for comparison of Float.NaN...
commit | commitdiff | tree
2016-11-16 gmungocJAL-2319 corrected reporting of SIFTS mapping
 commit | commitdiff | tree
2016-11-08 gmungocJAL-2301 corrected search example to match AA properties...
commit | commitdiff | tree
2016-11-08 gmungocJAL-2301 made T hydrophobic as per the cited conservation...
commit | commitdiff | tree
2016-11-08 gmungocJAL-1961 added link to GFF3 format as well as GFF2
 commit | commitdiff | tree
2016-11-07 gmungocJAL-1270 renamed helper method so it is not run as...
commit | commitdiff | tree
2016-11-07 gmungocJAL-2272 another test case
 commit | commitdiff | tree
2016-11-07 gmungocJAL-1805 groups=Functional added where missing
 commit | commitdiff | tree
2016-11-07 gmungocJAL-2272 unit tests added for Platform.isControlDown
 commit | commitdiff | tree
2016-11-07 gmungocJAL-2318 updated help text
 commit | commitdiff | tree
2016-11-07 gmungocJAL-2282 show url links that need checked; remove ...
commit | commitdiff | tree
2016-11-04 gmungocJAL-2272 right mouse button on Mac is not Cmd equivalent!
 commit | commitdiff | tree
2016-11-03 gmungocJAL-2281 test added to show searchRefs is now not case...
commit | commitdiff | tree
2016-11-02 gmungocJAL-2301 table formatted, and corrected to match the...
commit | commitdiff | tree
2016-11-02 gmungocJAL-98 JAL-1854 encapsulate 'magic number' threshold...
commit | commitdiff | tree
2016-11-02 gmungocJAL-98 ProfileI interface for Profile
 commit | commitdiff | tree
2016-11-02 gmungocJAL-98 test updated for percentage rounded
 commit | commitdiff | tree
2016-11-02 gmungocJAL-98 Profile and ResidueCount moved from analysis...
commit | commitdiff | tree
2016-11-02 gmungocJAL-98 wording "negatively conserved" now "absence...
commit | commitdiff | tree
2016-11-01 gmungocConservation now using ResidueCount; tests added
 commit | commitdiff | tree
2016-11-01 gmungocJAL-98 use Integer constants; tests added for propHash...
commit | commitdiff | tree
2016-11-01 gmungocJAL-98 typo in javadoc
 commit | commitdiff | tree
2016-11-01 gmungocJAL-98 simplified repeat() method
 commit | commitdiff | tree
2016-11-01 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2016-10-31 gmungocJAL-98 round when formatting dec places
 commit | commitdiff | tree
2016-10-31 gmungocJAL-1723 ellipsis in tooltip if xrefs to more than...
commit | commitdiff | tree
2016-10-31 gmungocMerge branch 'develop' into features/JAL-1723_sequenceReport
 commit | commitdiff | tree
2016-10-27 gmungocJAL-2282 test assertions for 'other' dbsource
 commit | commitdiff | tree
2016-10-27 gmungocJAL-98 refactor bleachColour() to ColorUtils
 commit | commitdiff | tree
2016-10-27 gmungocJAL-2287 treat Escape like Cancel in dialog box
 commit | commitdiff | tree
2016-10-26 gmungocJAL-2287 Cancel option on Close Chimera? dialog
 commit | commitdiff | tree
2016-10-26 gmungocMerge branch 'bug/JAL-98consensusMemory' into develop
 commit | commitdiff | tree
2016-10-26 gmungocJAL-2286 modal residue check + commenting
 commit | commitdiff | tree
2016-10-26 gmungocJAL-98 null reference to globalColourScheme as it has...
commit | commitdiff | tree
2016-10-26 gmungocJAL-2286 javadoc, refactor, unit tests for threshold...
commit | commitdiff | tree
2016-10-25 gmungocJAL-2286 use constant for fixed colours
 commit | commitdiff | tree
2016-10-25 gmungocJAL-98 javadoc corrected
 commit | commitdiff | tree
2016-10-25 gmungocJAL-98 javadoc added
 commit | commitdiff | tree
2016-10-25 gmungocJAL-98 minor fixes to / tests for annotation derivation
 commit | commitdiff | tree
2016-10-25 gmungocJAL-98 field comments updated
 commit | commitdiff | tree
2016-10-25 gmungocJAL-98 small efficiency fix + commenting
 commit | commitdiff | tree
2016-10-25 gmungocJAL-98 javadoc / comments updated
 commit | commitdiff | tree
2016-10-24 gmungocJAL-98 fixme comment removed - nothing to do
 commit | commitdiff | tree
2016-10-24 gmungocJAL-98 ResidueCount 100% test coverage (and bug fixes!)
 commit | commitdiff | tree
2016-10-24 gmungocJAL-2272 Cmd-drag to group edit sequences on Mac (Ctrl...
commit | commitdiff | tree
2016-10-24 gmungocJAL-2283 corrected preferences settings for test
 commit | commitdiff | tree
2016-10-24 gmungocMerge branch 'develop' into bug/JAL-98consensusMemory
 commit | commitdiff | tree
2016-10-24 gmungocJAL-2283 set 'by conservation' correctly when changing...
commit | commitdiff | tree
2016-10-14 gmungocMerge branch 'releases/Release_2_10_Branch' into task...
commit | commitdiff | tree
2016-10-13 gmungocJAL-2253 2 second timeout on ping URL, default 5 minutes...
commit | commitdiff | tree
2016-10-13 gmungocMerge branch 'releases/Release_2_10_Branch' into develop
 commit | commitdiff | tree
2016-10-13 gmungocJAL-1479 revise warning message to suit all contexts
 commit | commitdiff | tree
2016-10-13 gmungocJAL-2044 increase Jmol file load timeout from 5 to...
commit | commitdiff | tree
2016-10-13 gmungocJAL-2044 ensure AAStructureBindingModel.pdbEntry has...
commit | commitdiff | tree
2016-10-13 gmungocJAL-2044 include model name in progress bar message...
commit | commitdiff | tree
2016-10-11 gmungocMerge branch 'releases/Release_2_10_Branch' into develop
 commit | commitdiff | tree
2016-10-11 gmungocJAL-2241 check for null jprovider when processing New...
commit | commitdiff | tree
2016-10-11 gmungocMerge branch 'releases/Release_2_10_Branch' into develop
 commit | commitdiff | tree
2016-10-11 gmungocJAL-1479 small tidy of error message when Sifts mapping...
commit | commitdiff | tree
2016-10-11 gmungocJAL-2233 reverted changes to Jmol logging levels
 commit | commitdiff | tree
2016-10-06 gmungocJAL-2254 map error text in root node of EMBL XML response
 commit | commitdiff | tree
2016-10-06 gmungocMerge branch 'develop' into bug/JAL-98consensusMemory
 commit | commitdiff | tree
2016-10-06 gmungocMerge branch 'develop' into task/JAL-2196pdbeProperties
 commit | commitdiff | tree
2016-10-06 gmungocJAL-2252 now buffered read of 3 lines of a time in...
commit | commitdiff | tree
2016-10-06 gmungocJAL-2245 checks for null added (in case EMBL fetch...
commit | commitdiff | tree
2016-10-05 gmungocMerge branch 'develop' into task/JAL-2196pdbeProperties
 commit | commitdiff | tree
2016-10-05 gmungocJAL-1191 revert to using SequenceOntologyLite due to...
commit | commitdiff | tree
2016-10-05 gmungocJAL-1191 configure full SO for desktop, SOLite for...
commit | commitdiff | tree
2016-10-05 gmungocJAL-2245 defence against NullPointer if no EMBL data...
commit | commitdiff | tree
2016-10-05 gmungocJAL-1191 use full SO in desktop application
 commit | commitdiff | tree
2016-10-05 gmungocJAL-2105 update Ensembl REST version to 4.7
 commit | commitdiff | tree
2016-10-05 gmungocJAL-1191 refined warning message
 commit | commitdiff | tree
2016-10-05 gmungocJAL-1191 added mRNA isA transcript to SequenceOntologyLite...
commit | commitdiff | tree
2016-10-04 gmungocMerge branch 'bug/JAL-2245enaXmlChange' into develop
 commit | commitdiff | tree
2016-10-04 gmungocMerge branch 'bug/JAL-2210_hack_for_Release_2_10' into...
commit | commitdiff | tree
2016-10-04 gmungocJAL-2245 Castor mapping and code changes for change...
commit | commitdiff | tree
2016-10-04 gmungocJAL-2232 some fix / partial fix of failing tests
 commit | commitdiff | tree
2016-10-04 gmungocJAL-2232 added test that failed before last fix, passes...
commit | commitdiff | tree
2016-10-04 gmungocJAL-2232 JAL-2154 update dbrefs to newly created dataset...
commit | commitdiff | tree
2016-10-03 gmungocJAL-2110 javadoc formatting only
 commit | commitdiff | tree
2016-10-03 gmungocJAL-2110 JAL-1705 handle not found (400) better
 commit | commitdiff | tree
2016-10-03 gmungocJAL-2110 additional tests for setDatasetSequence, javadoc...
commit | commitdiff | tree
2016-10-03 gmungocJAL-98 throw exception (unhandled) for int overthrow...
commit | commitdiff | tree
2016-10-03 gmungocJAL-98 use Profile to store consensus, ResidueCount...
commit | commitdiff | tree
2016-10-03 gmungocJAL-98 bespoke fast percentage formatter for consensus...
commit | commitdiff | tree
2016-09-30 gmungocMerge branch 'develop' into bug/JAL-98consensusMemory
 commit | commitdiff | tree
2016-09-30 gmungocJAL-2236 code restored (and some compiler warnings...
commit | commitdiff | tree
2016-09-30 gmungocMerge branch 'develop' into features/JAL-1856dbRefFetcherMes...
commit | commitdiff | tree
2016-09-30 gmungocJAL-2234 FER1_ARATH renamed FER2_ARATH and vice versa
 commit | commitdiff | tree
2016-09-30 gmungocJAL-2236 fixes for desktop and applet implementation...
commit | commitdiff | tree
2016-09-29 gmungocJAL-1856 better warning messages for sequence matching...
commit | commitdiff | tree
2016-09-29 gmungocJAL-2213 code warnings addressed (typed collections...
commit | commitdiff | tree
2016-09-29 gmungocJAL-2213 removed PDB from db sources list; also code...
commit | commitdiff | tree
2016-09-29 gmungocJAL-2213 made RESNUM constant private (not used elsewhere...
commit | commitdiff | tree
2016-09-29 gmungocJAL-2213 corrected wait for files to load in Jmol;...
commit | commitdiff | tree
2016-09-29 gmungocJAL-2237 apply default filter as sort in initial search
 commit | commitdiff | tree
2016-09-29 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
next