6e6d88e894bf54b33baa04ad26d36961a0cf84ec
[jabaws.git] / binaries / src / clustalw / src / .deps / FileParser.Po
1 FileParser.o FileParser.o: fileInput/FileParser.cpp config.h \
2   fileInput/FileParser.h /usr/include/ctype.h /usr/include/features.h \
3   /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
4   /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
5   /usr/include/bits/types.h \
6   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/include/stddef.h \
7   /usr/include/bits/typesizes.h /usr/include/endian.h \
8   /usr/include/bits/endian.h /usr/include/xlocale.h \
9   fileInput/../alignment/Sequence.h \
10   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/vector \
11   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/functexcept.h \
12   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/exception_defines.h \
13   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_algobase.h \
14   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/c++config.h \
15   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/os_defines.h \
16   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/cpu_defines.h \
17   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cstring \
18   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cstddef \
19   /usr/include/string.h \
20   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/climits \
21   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/include/limits.h \
22   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/include/syslimits.h \
23   /usr/include/limits.h /usr/include/bits/posix1_lim.h \
24   /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
25   /usr/include/bits/posix2_lim.h /usr/include/bits/xopen_lim.h \
26   /usr/include/bits/stdio_lim.h \
27   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cstdlib \
28   /usr/include/stdlib.h /usr/include/bits/waitflags.h \
29   /usr/include/bits/waitstatus.h /usr/include/sys/types.h \
30   /usr/include/time.h /usr/include/sys/select.h \
31   /usr/include/bits/select.h /usr/include/bits/sigset.h \
32   /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
33   /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
34   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/iosfwd \
35   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/c++locale.h \
36   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cstdio \
37   /usr/include/stdio.h /usr/include/libio.h /usr/include/_G_config.h \
38   /usr/include/wchar.h /usr/include/bits/wchar.h /usr/include/gconv.h \
39   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/include/stdarg.h \
40   /usr/include/bits/sys_errlist.h /usr/include/bits/stdio.h \
41   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/clocale \
42   /usr/include/locale.h /usr/include/bits/locale.h \
43   /usr/include/langinfo.h /usr/include/nl_types.h /usr/include/iconv.h \
44   /usr/include/libintl.h \
45   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/c++io.h \
46   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/gthr.h \
47   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/gthr-default.h \
48   /usr/include/pthread.h /usr/include/sched.h /usr/include/bits/sched.h \
49   /usr/include/signal.h /usr/include/bits/setjmp.h /usr/include/unistd.h \
50   /usr/include/bits/posix_opt.h /usr/include/bits/environments.h \
51   /usr/include/bits/confname.h /usr/include/getopt.h \
52   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cctype \
53   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stringfwd.h \
54   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/postypes.h \
55   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cwchar \
56   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/ctime \
57   /usr/include/stdint.h \
58   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_pair.h \
59   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/cpp_type_traits.h \
60   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_iterator_base_types.h \
61   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_iterator_base_funcs.h \
62   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/concept_check.h \
63   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_iterator.h \
64   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/debug/debug.h \
65   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/allocator.h \
66   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/c++allocator.h \
67   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/ext/new_allocator.h \
68   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/new \
69   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/exception \
70   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_construct.h \
71   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_uninitialized.h \
72   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_vector.h \
73   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_bvector.h \
74   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/vector.tcc \
75   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/string \
76   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/char_traits.h \
77   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/memory \
78   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_raw_storage_iter.h \
79   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/limits \
80   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_function.h \
81   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/basic_string.h \
82   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/atomicity.h \
83   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/atomic_word.h \
84   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/algorithm \
85   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_algo.h \
86   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_heap.h \
87   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_tempbuf.h \
88   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/basic_string.tcc \
89   fileInput/../alignment/../general/userparams.h \
90   fileInput/../alignment/../general/UserParameters.h \
91   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/iostream \
92   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/ostream \
93   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/ios \
94   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/localefwd.h \
95   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/ios_base.h \
96   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/locale_classes.h \
97   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/streambuf \
98   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/streambuf.tcc \
99   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/basic_ios.h \
100   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/streambuf_iterator.h \
101   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/locale_facets.h \
102   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cwctype \
103   /usr/include/wctype.h \
104   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/ctype_base.h \
105   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/ctype_inline.h \
106   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/codecvt.h \
107   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/time_members.h \
108   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/messages_members.h \
109   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/basic_ios.tcc \
110   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/ostream.tcc \
111   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/locale \
112   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/locale_facets.tcc \
113   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/typeinfo \
114   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/istream \
115   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/istream.tcc \
116   fileInput/../alignment/../general/utils.h \
117   fileInput/../alignment/../general/Utility.h /usr/include/errno.h \
118   /usr/include/bits/errno.h /usr/include/linux/errno.h \
119   /usr/include/asm/errno.h /usr/include/asm-x86_64/errno.h \
120   /usr/include/asm-generic/errno.h /usr/include/asm-generic/errno-base.h \
121   fileInput/../alignment/../general/clustalw.h \
122   fileInput/../alignment/../general/general.h \
123   fileInput/../alignment/../general/Array2D.h \
124   fileInput/../alignment/../general/SquareMat.h \
125   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/iomanip \
126   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/functional \
127   fileInput/../alignment/../general/SymMatrix.h \
128   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cmath \
129   /usr/include/math.h /usr/include/bits/huge_val.h \
130   /usr/include/bits/huge_valf.h /usr/include/bits/huge_vall.h \
131   /usr/include/bits/inf.h /usr/include/bits/nan.h \
132   /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h \
133   /usr/include/bits/mathinline.h \
134   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/cmath.tcc \
135   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/stdexcept \
136   fileInput/../alignment/../general/utils.h \
137   fileInput/../general/userparams.h fileInput/InFileStream.h \
138   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/fstream \
139   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/basic_file.h \
140   /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/fstream.tcc
141
142 config.h:
143
144 fileInput/FileParser.h:
145
146 /usr/include/ctype.h:
147
148 /usr/include/features.h:
149
150 /usr/include/sys/cdefs.h:
151
152 /usr/include/bits/wordsize.h:
153
154 /usr/include/gnu/stubs.h:
155
156 /usr/include/gnu/stubs-64.h:
157
158 /usr/include/bits/types.h:
159
160 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/include/stddef.h:
161
162 /usr/include/bits/typesizes.h:
163
164 /usr/include/endian.h:
165
166 /usr/include/bits/endian.h:
167
168 /usr/include/xlocale.h:
169
170 fileInput/../alignment/Sequence.h:
171
172 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/vector:
173
174 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/functexcept.h:
175
176 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/exception_defines.h:
177
178 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_algobase.h:
179
180 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/c++config.h:
181
182 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/os_defines.h:
183
184 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/cpu_defines.h:
185
186 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cstring:
187
188 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cstddef:
189
190 /usr/include/string.h:
191
192 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/climits:
193
194 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/include/limits.h:
195
196 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/include/syslimits.h:
197
198 /usr/include/limits.h:
199
200 /usr/include/bits/posix1_lim.h:
201
202 /usr/include/bits/local_lim.h:
203
204 /usr/include/linux/limits.h:
205
206 /usr/include/bits/posix2_lim.h:
207
208 /usr/include/bits/xopen_lim.h:
209
210 /usr/include/bits/stdio_lim.h:
211
212 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cstdlib:
213
214 /usr/include/stdlib.h:
215
216 /usr/include/bits/waitflags.h:
217
218 /usr/include/bits/waitstatus.h:
219
220 /usr/include/sys/types.h:
221
222 /usr/include/time.h:
223
224 /usr/include/sys/select.h:
225
226 /usr/include/bits/select.h:
227
228 /usr/include/bits/sigset.h:
229
230 /usr/include/bits/time.h:
231
232 /usr/include/sys/sysmacros.h:
233
234 /usr/include/bits/pthreadtypes.h:
235
236 /usr/include/alloca.h:
237
238 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/iosfwd:
239
240 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/c++locale.h:
241
242 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cstdio:
243
244 /usr/include/stdio.h:
245
246 /usr/include/libio.h:
247
248 /usr/include/_G_config.h:
249
250 /usr/include/wchar.h:
251
252 /usr/include/bits/wchar.h:
253
254 /usr/include/gconv.h:
255
256 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/include/stdarg.h:
257
258 /usr/include/bits/sys_errlist.h:
259
260 /usr/include/bits/stdio.h:
261
262 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/clocale:
263
264 /usr/include/locale.h:
265
266 /usr/include/bits/locale.h:
267
268 /usr/include/langinfo.h:
269
270 /usr/include/nl_types.h:
271
272 /usr/include/iconv.h:
273
274 /usr/include/libintl.h:
275
276 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/c++io.h:
277
278 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/gthr.h:
279
280 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/gthr-default.h:
281
282 /usr/include/pthread.h:
283
284 /usr/include/sched.h:
285
286 /usr/include/bits/sched.h:
287
288 /usr/include/signal.h:
289
290 /usr/include/bits/setjmp.h:
291
292 /usr/include/unistd.h:
293
294 /usr/include/bits/posix_opt.h:
295
296 /usr/include/bits/environments.h:
297
298 /usr/include/bits/confname.h:
299
300 /usr/include/getopt.h:
301
302 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cctype:
303
304 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stringfwd.h:
305
306 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/postypes.h:
307
308 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cwchar:
309
310 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/ctime:
311
312 /usr/include/stdint.h:
313
314 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_pair.h:
315
316 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/cpp_type_traits.h:
317
318 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_iterator_base_types.h:
319
320 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_iterator_base_funcs.h:
321
322 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/concept_check.h:
323
324 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_iterator.h:
325
326 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/debug/debug.h:
327
328 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/allocator.h:
329
330 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/c++allocator.h:
331
332 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/ext/new_allocator.h:
333
334 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/new:
335
336 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/exception:
337
338 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_construct.h:
339
340 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_uninitialized.h:
341
342 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_vector.h:
343
344 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_bvector.h:
345
346 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/vector.tcc:
347
348 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/string:
349
350 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/char_traits.h:
351
352 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/memory:
353
354 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_raw_storage_iter.h:
355
356 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/limits:
357
358 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_function.h:
359
360 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/basic_string.h:
361
362 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/atomicity.h:
363
364 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/atomic_word.h:
365
366 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/algorithm:
367
368 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_algo.h:
369
370 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_heap.h:
371
372 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_tempbuf.h:
373
374 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/basic_string.tcc:
375
376 fileInput/../alignment/../general/userparams.h:
377
378 fileInput/../alignment/../general/UserParameters.h:
379
380 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/iostream:
381
382 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/ostream:
383
384 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/ios:
385
386 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/localefwd.h:
387
388 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/ios_base.h:
389
390 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/locale_classes.h:
391
392 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/streambuf:
393
394 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/streambuf.tcc:
395
396 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/basic_ios.h:
397
398 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/streambuf_iterator.h:
399
400 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/locale_facets.h:
401
402 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cwctype:
403
404 /usr/include/wctype.h:
405
406 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/ctype_base.h:
407
408 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/ctype_inline.h:
409
410 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/codecvt.h:
411
412 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/time_members.h:
413
414 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/messages_members.h:
415
416 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/basic_ios.tcc:
417
418 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/ostream.tcc:
419
420 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/locale:
421
422 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/locale_facets.tcc:
423
424 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/typeinfo:
425
426 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/istream:
427
428 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/istream.tcc:
429
430 fileInput/../alignment/../general/utils.h:
431
432 fileInput/../alignment/../general/Utility.h:
433
434 /usr/include/errno.h:
435
436 /usr/include/bits/errno.h:
437
438 /usr/include/linux/errno.h:
439
440 /usr/include/asm/errno.h:
441
442 /usr/include/asm-x86_64/errno.h:
443
444 /usr/include/asm-generic/errno.h:
445
446 /usr/include/asm-generic/errno-base.h:
447
448 fileInput/../alignment/../general/clustalw.h:
449
450 fileInput/../alignment/../general/general.h:
451
452 fileInput/../alignment/../general/Array2D.h:
453
454 fileInput/../alignment/../general/SquareMat.h:
455
456 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/iomanip:
457
458 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/functional:
459
460 fileInput/../alignment/../general/SymMatrix.h:
461
462 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/cmath:
463
464 /usr/include/math.h:
465
466 /usr/include/bits/huge_val.h:
467
468 /usr/include/bits/huge_valf.h:
469
470 /usr/include/bits/huge_vall.h:
471
472 /usr/include/bits/inf.h:
473
474 /usr/include/bits/nan.h:
475
476 /usr/include/bits/mathdef.h:
477
478 /usr/include/bits/mathcalls.h:
479
480 /usr/include/bits/mathinline.h:
481
482 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/cmath.tcc:
483
484 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/stdexcept:
485
486 fileInput/../alignment/../general/utils.h:
487
488 fileInput/../general/userparams.h:
489
490 fileInput/InFileStream.h:
491
492 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/fstream:
493
494 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/x86_64-redhat-linux/bits/basic_file.h:
495
496 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/fstream.tcc: