webservices/compbio/ws/server/resource/GlobPlotWS_schema1.xsd

   1 <?xml version="1.0" encoding="UTF-8" standalone="yes"?>
   2 <xs:schema version="1.0" targetNamespace="http://msa.data.compbio/01/12/2010/" xmlns:tns="http://msa.data.compbio/01/12/2010/" xmlns:xs="http://www.w3.org/2001/XMLSchema">
   3
   4   <xs:element name="JobSubmissionException" type="tns:JobSubmissionException"/>
   5
   6   <xs:element name="LimitExceededException" type="tns:LimitExceededException"/>
   7
   8   <xs:element name="ResultNotAvailableException" type="tns:ResultNotAvailableException"/>
   9
  10   <xs:element name="UnsupportedRuntimeException" type="tns:UnsupportedRuntimeException"/>
  11
  12   <xs:element name="WrongParameterException" type="tns:WrongParameterException"/>
  13
  14   <xs:element name="analize" type="tns:analize"/>
  15
  16   <xs:element name="analizeResponse" type="tns:analizeResponse"/>
  17
  18   <xs:element name="cancelJob" type="tns:cancelJob"/>
  19
  20   <xs:element name="cancelJobResponse" type="tns:cancelJobResponse"/>
  21
  22   <xs:element name="customAnalize" type="tns:customAnalize"/>
  23
  24   <xs:element name="customAnalizeResponse" type="tns:customAnalizeResponse"/>
  25
  26   <xs:element name="getAnnotation" type="tns:getAnnotation"/>
  27
  28   <xs:element name="getAnnotationResponse" type="tns:getAnnotationResponse"/>
  29
  30   <xs:element name="getJobStatus" type="tns:getJobStatus"/>
  31
  32   <xs:element name="getJobStatusResponse" type="tns:getJobStatusResponse"/>
  33
  34   <xs:element name="getLimit" type="tns:getLimit"/>
  35
  36   <xs:element name="getLimitResponse" type="tns:getLimitResponse"/>
  37
  38   <xs:element name="getLimits" type="tns:getLimits"/>
  39
  40   <xs:element name="getLimitsResponse" type="tns:getLimitsResponse"/>
  41
  42   <xs:element name="getPresets" type="tns:getPresets"/>
  43
  44   <xs:element name="getPresetsResponse" type="tns:getPresetsResponse"/>
  45
  46   <xs:element name="getRunnerOptions" type="tns:getRunnerOptions"/>
  47
  48   <xs:element name="getRunnerOptionsResponse" type="tns:getRunnerOptionsResponse"/>
  49
  50   <xs:element name="limits" type="tns:limitsManager"/>
  51
  52   <xs:element name="presetAnalize" type="tns:presetAnalize"/>
  53
  54   <xs:element name="presetAnalizeResponse" type="tns:presetAnalizeResponse"/>
  55
  56   <xs:element name="presets" type="tns:presetManager"/>
  57
  58   <xs:element name="pullExecStatistics" type="tns:pullExecStatistics"/>
  59
  60   <xs:element name="pullExecStatisticsResponse" type="tns:pullExecStatisticsResponse"/>
  61
  62   <xs:element name="runnerConfig" type="tns:runnerConfig"/>
  63
  64   <xs:complexType name="presetAnalize">
  65     <xs:sequence>
  66       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
  67       <xs:element name="preset" type="tns:preset" minOccurs="0"/>
  68     </xs:sequence>
  69   </xs:complexType>
  70
  71   <xs:complexType name="fastaSequence">
  72     <xs:sequence>
  73       <xs:element name="id" type="xs:string" minOccurs="0"/>
  74       <xs:element name="sequence" type="xs:string" minOccurs="0"/>
  75     </xs:sequence>
  76   </xs:complexType>
  77
  78   <xs:complexType name="preset">
  79     <xs:sequence>
  80       <xs:element name="name" type="xs:string"/>
  81       <xs:element name="description" type="xs:string" minOccurs="0"/>
  82       <xs:element name="optlist" minOccurs="0">
  83         <xs:complexType>
  84           <xs:sequence>
  85             <xs:element name="option" type="xs:string" maxOccurs="unbounded"/>
  86           </xs:sequence>
  87         </xs:complexType>
  88       </xs:element>
  89     </xs:sequence>
  90   </xs:complexType>
  91
  92   <xs:complexType name="presetAnalizeResponse">
  93     <xs:sequence>
  94       <xs:element name="return" type="xs:string" minOccurs="0"/>
  95     </xs:sequence>
  96   </xs:complexType>
  97
  98   <xs:complexType name="UnsupportedRuntimeException">
  99     <xs:sequence>
 100       <xs:element name="message" type="xs:string" minOccurs="0"/>
 101     </xs:sequence>
 102   </xs:complexType>
 103
 104   <xs:complexType name="LimitExceededException">
 105     <xs:sequence>
 106       <xs:element name="actualNumberofSequences" type="xs:int"/>
 107       <xs:element name="message" type="xs:string" minOccurs="0"/>
 108       <xs:element name="numberOfSequencesAllowed" type="xs:int"/>
 109       <xs:element name="sequenceLenghtActual" type="xs:int"/>
 110       <xs:element name="sequenceLenghtAllowed" type="xs:int"/>
 111     </xs:sequence>
 112   </xs:complexType>
 113
 114   <xs:complexType name="JobSubmissionException">
 115     <xs:sequence>
 116       <xs:element name="message" type="xs:string" minOccurs="0"/>
 117     </xs:sequence>
 118   </xs:complexType>
 119
 120   <xs:complexType name="WrongParameterException">
 121     <xs:sequence>
 122       <xs:element name="message" type="xs:string" minOccurs="0"/>
 123     </xs:sequence>
 124   </xs:complexType>
 125
 126   <xs:complexType name="getRunnerOptions">
 127     <xs:sequence/>
 128   </xs:complexType>
 129
 130   <xs:complexType name="getRunnerOptionsResponse">
 131     <xs:sequence>
 132       <xs:element name="return" type="tns:runnerConfig" minOccurs="0"/>
 133     </xs:sequence>
 134   </xs:complexType>
 135
 136   <xs:complexType name="runnerConfig">
 137     <xs:sequence>
 138       <xs:element name="options" type="tns:option" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 139       <xs:element name="parameters" type="tns:parameter" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 140       <xs:element name="prmSeparator" type="xs:string" minOccurs="0"/>
 141       <xs:element name="runnerClassName" type="xs:string"/>
 142     </xs:sequence>
 143   </xs:complexType>
 144
 145   <xs:complexType name="option">
 146     <xs:sequence>
 147       <xs:element name="description" type="xs:string"/>
 148       <xs:element name="optionNames" type="xs:string" maxOccurs="unbounded"/>
 149       <xs:element name="name" type="xs:string"/>
 150       <xs:element name="furtherDetails" type="xs:anyURI" minOccurs="0"/>
 151       <xs:element name="defaultValue" type="xs:string" minOccurs="0"/>
 152     </xs:sequence>
 153     <xs:attribute name="isRequired" type="xs:boolean" use="required"/>
 154   </xs:complexType>
 155
 156   <xs:complexType name="parameter">
 157     <xs:complexContent>
 158       <xs:extension base="tns:option">
 159         <xs:sequence>
 160           <xs:element name="possibleValues" type="xs:string" minOccurs="0" maxOccurs="unbounded"/>
 161           <xs:element name="validValue" type="tns:valueConstrain" minOccurs="0"/>
 162         </xs:sequence>
 163       </xs:extension>
 164     </xs:complexContent>
 165   </xs:complexType>
 166
 167   <xs:complexType name="valueConstrain">
 168     <xs:sequence>
 169       <xs:element name="type" type="tns:type"/>
 170       <xs:element name="max" type="xs:string" minOccurs="0"/>
 171       <xs:element name="min" type="xs:string" minOccurs="0"/>
 172     </xs:sequence>
 173   </xs:complexType>
 174
 175   <xs:complexType name="analize">
 176     <xs:sequence>
 177       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 178     </xs:sequence>
 179   </xs:complexType>
 180
 181   <xs:complexType name="analizeResponse">
 182     <xs:sequence>
 183       <xs:element name="return" type="xs:string" minOccurs="0"/>
 184     </xs:sequence>
 185   </xs:complexType>
 186
 187   <xs:complexType name="getJobStatus">
 188     <xs:sequence>
 189       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 190     </xs:sequence>
 191   </xs:complexType>
 192
 193   <xs:complexType name="getJobStatusResponse">
 194     <xs:sequence>
 195       <xs:element name="return" type="tns:jobStatus" minOccurs="0"/>
 196     </xs:sequence>
 197   </xs:complexType>
 198
 199   <xs:complexType name="customAnalize">
 200     <xs:sequence>
 201       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 202       <xs:element name="options" type="tns:option" minOccurs="0" maxOccurs="unbounded"/>
 203     </xs:sequence>
 204   </xs:complexType>
 205
 206   <xs:complexType name="customAnalizeResponse">
 207     <xs:sequence>
 208       <xs:element name="return" type="xs:string" minOccurs="0"/>
 209     </xs:sequence>
 210   </xs:complexType>
 211
 212   <xs:complexType name="getAnnotation">
 213     <xs:sequence>
 214       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 215     </xs:sequence>
 216   </xs:complexType>
 217
 218   <xs:complexType name="getAnnotationResponse">
 219     <xs:sequence>
 220       <xs:element name="return" type="tns:scoreManager" minOccurs="0"/>
 221     </xs:sequence>
 222   </xs:complexType>
 223
 224   <xs:complexType name="scoreManager">
 225     <xs:sequence>
 226       <xs:element name="seqScores" type="tns:scoreHolder" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 227     </xs:sequence>
 228   </xs:complexType>
 229
 230   <xs:complexType name="scoreHolder">
 231     <xs:sequence>
 232       <xs:element name="id" type="xs:string" minOccurs="0"/>
 233       <xs:element name="scores" type="tns:score" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 234     </xs:sequence>
 235   </xs:complexType>
 236
 237   <xs:complexType name="score">
 238     <xs:sequence>
 239       <xs:element name="method" type="xs:string" minOccurs="0"/>
 240       <xs:element name="ranges" type="tns:range" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 241       <xs:element name="scores" type="xs:float" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 242     </xs:sequence>
 243   </xs:complexType>
 244
 245   <xs:complexType name="range">
 246     <xs:sequence>
 247       <xs:element name="from" type="xs:int"/>
 248       <xs:element name="to" type="xs:int"/>
 249     </xs:sequence>
 250   </xs:complexType>
 251
 252   <xs:complexType name="ResultNotAvailableException">
 253     <xs:sequence>
 254       <xs:element name="message" type="xs:string" minOccurs="0"/>
 255     </xs:sequence>
 256   </xs:complexType>
 257
 258   <xs:complexType name="pullExecStatistics">
 259     <xs:sequence>
 260       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 261       <xs:element name="position" type="xs:long"/>
 262     </xs:sequence>
 263   </xs:complexType>
 264
 265   <xs:complexType name="pullExecStatisticsResponse">
 266     <xs:sequence>
 267       <xs:element name="return" type="tns:chunkHolder" minOccurs="0"/>
 268     </xs:sequence>
 269   </xs:complexType>
 270
 271   <xs:complexType name="chunkHolder">
 272     <xs:sequence>
 273       <xs:element name="chunk" type="xs:string" minOccurs="0"/>
 274       <xs:element name="position" type="xs:long"/>
 275     </xs:sequence>
 276   </xs:complexType>
 277
 278   <xs:complexType name="getPresets">
 279     <xs:sequence/>
 280   </xs:complexType>
 281
 282   <xs:complexType name="getPresetsResponse">
 283     <xs:sequence>
 284       <xs:element name="return" type="tns:presetManager" minOccurs="0"/>
 285     </xs:sequence>
 286   </xs:complexType>
 287
 288   <xs:complexType name="presetManager">
 289     <xs:sequence>
 290       <xs:element name="runnerClassName" type="xs:string"/>
 291       <xs:element name="preset" type="tns:preset" maxOccurs="unbounded"/>
 292     </xs:sequence>
 293   </xs:complexType>
 294
 295   <xs:complexType name="getLimits">
 296     <xs:sequence/>
 297   </xs:complexType>
 298
 299   <xs:complexType name="getLimitsResponse">
 300     <xs:sequence>
 301       <xs:element name="return" type="tns:limitsManager" minOccurs="0"/>
 302     </xs:sequence>
 303   </xs:complexType>
 304
 305   <xs:complexType name="limitsManager">
 306     <xs:sequence>
 307       <xs:element name="runnerClassName" type="xs:string" minOccurs="0"/>
 308       <xs:element name="limit" type="tns:limit" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 309     </xs:sequence>
 310   </xs:complexType>
 311
 312   <xs:complexType name="limit">
 313     <xs:sequence>
 314       <xs:element name="preset" type="xs:string" minOccurs="0"/>
 315       <xs:element name="seqNumber" type="xs:int"/>
 316       <xs:element name="seqLength" type="xs:int"/>
 317     </xs:sequence>
 318     <xs:attribute name="isDefault" type="xs:boolean" use="required"/>
 319   </xs:complexType>
 320
 321   <xs:complexType name="getLimit">
 322     <xs:sequence>
 323       <xs:element name="presetName" type="xs:string" minOccurs="0"/>
 324     </xs:sequence>
 325   </xs:complexType>
 326
 327   <xs:complexType name="getLimitResponse">
 328     <xs:sequence>
 329       <xs:element name="return" type="tns:limit" minOccurs="0"/>
 330     </xs:sequence>
 331   </xs:complexType>
 332
 333   <xs:complexType name="cancelJob">
 334     <xs:sequence>
 335       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 336     </xs:sequence>
 337   </xs:complexType>
 338
 339   <xs:complexType name="cancelJobResponse">
 340     <xs:sequence>
 341       <xs:element name="return" type="xs:boolean"/>
 342     </xs:sequence>
 343   </xs:complexType>
 344
 345   <xs:simpleType name="type">
 346     <xs:restriction base="xs:string">
 347       <xs:enumeration value="Integer"/>
 348       <xs:enumeration value="Float"/>
 349     </xs:restriction>
 350   </xs:simpleType>
 351
 352   <xs:simpleType name="jobStatus">
 353     <xs:restriction base="xs:string">
 354       <xs:enumeration value="PENDING"/>
 355       <xs:enumeration value="RUNNING"/>
 356       <xs:enumeration value="CANCELLED"/>
 357       <xs:enumeration value="FINISHED"/>
 358       <xs:enumeration value="FAILED"/>
 359       <xs:enumeration value="UNDEFINED"/>
 360       <xs:enumeration value="STARTED"/>
 361       <xs:enumeration value="SUBMITTED"/>
 362       <xs:enumeration value="COLLECTED"/>
 363     </xs:restriction>
 364   </xs:simpleType>
 365 </xs:schema>
 366