website/full_javadoc/compbio/engine/conf/package-summary.html

   1 <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">\r
   2 <!--NewPage-->\r
   3 <HTML>\r
   4 <HEAD>\r
   5 <!-- Generated by javadoc (build 1.6.0_14) on Wed Feb 17 16:46:50 GMT 2010 -->\r
   6 <TITLE>\r
   7 compbio.engine.conf\r
   8 </TITLE>\r
   9 \r
  10 <META NAME="date" CONTENT="2010-02-17">\r
  11 \r
  12 <LINK REL ="stylesheet" TYPE="text/css" HREF="../../../stylesheet.css" TITLE="Style">\r
  13 \r
  14 <SCRIPT type="text/javascript">\r
  15 function windowTitle()\r
  16 {\r
  17     if (location.href.indexOf('is-external=true') == -1) {\r
  18         parent.document.title="compbio.engine.conf";\r
  19     }\r
  20 }\r
  21 </SCRIPT>\r
  22 <NOSCRIPT>\r
  23 </NOSCRIPT>\r
  24 \r
  25 </HEAD>\r
  26 \r
  27 <BODY BGCOLOR="white" onload="windowTitle();">\r
  28 <HR>\r
  29 \r
  30 \r
  31 <!-- ========= START OF TOP NAVBAR ======= -->\r
  32 <A NAME="navbar_top"><!-- --></A>\r
  33 <A HREF="#skip-navbar_top" title="Skip navigation links"></A>\r
  34 <TABLE BORDER="0" WIDTH="100%" CELLPADDING="1" CELLSPACING="0" SUMMARY="">\r
  35 <TR>\r
  36 <TD COLSPAN=2 BGCOLOR="#EEEEFF" CLASS="NavBarCell1">\r
  37 <A NAME="navbar_top_firstrow"><!-- --></A>\r
  38 <TABLE BORDER="0" CELLPADDING="0" CELLSPACING="3" SUMMARY="">\r
  39   <TR ALIGN="center" VALIGN="top">\r
  40   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../overview-summary.html"><FONT CLASS="NavBarFont1"><B>Overview</B></FONT></A>&nbsp;</TD>\r
  41   <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> &nbsp;<FONT CLASS="NavBarFont1Rev"><B>Package</B></FONT>&nbsp;</TD>\r
  42   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <FONT CLASS="NavBarFont1">Class</FONT>&nbsp;</TD>\r
  43   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="package-use.html"><FONT CLASS="NavBarFont1"><B>Use</B></FONT></A>&nbsp;</TD>\r
  44   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="package-tree.html"><FONT CLASS="NavBarFont1"><B>Tree</B></FONT></A>&nbsp;</TD>\r
  45   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../deprecated-list.html"><FONT CLASS="NavBarFont1"><B>Deprecated</B></FONT></A>&nbsp;</TD>\r
  46   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../index-files/index-1.html"><FONT CLASS="NavBarFont1"><B>Index</B></FONT></A>&nbsp;</TD>\r
  47   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../help-doc.html"><FONT CLASS="NavBarFont1"><B>Help</B></FONT></A>&nbsp;</TD>\r
  48   </TR>\r
  49 </TABLE>\r
  50 </TD>\r
  51 <TD ALIGN="right" VALIGN="top" ROWSPAN=3><EM>\r
  52 </EM>\r
  53 </TD>\r
  54 </TR>\r
  55 \r
  56 <TR>\r
  57 <TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">\r
  58 &nbsp;<A HREF="../../../compbio/engine/cluster/dundee/package-summary.html"><B>PREV PACKAGE</B></A>&nbsp;\r
  59 &nbsp;<A HREF="../../../compbio/engine/local/package-summary.html"><B>NEXT PACKAGE</B></A></FONT></TD>\r
  60 <TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">\r
  61   <A HREF="../../../index.html?compbio/engine/conf/package-summary.html" target="_top"><B>FRAMES</B></A>  &nbsp;\r
  62 &nbsp;<A HREF="package-summary.html" target="_top"><B>NO FRAMES</B></A>  &nbsp;\r
  63 &nbsp;<SCRIPT type="text/javascript">\r
  64   <!--\r
  65   if(window==top) {\r
  66     document.writeln('<A HREF="../../../allclasses-noframe.html"><B>All Classes</B></A>');\r
  67   }\r
  68   //-->\r
  69 </SCRIPT>\r
  70 <NOSCRIPT>\r
  71   <A HREF="../../../allclasses-noframe.html"><B>All Classes</B></A>\r
  72 </NOSCRIPT>\r
  73 \r
  74 \r
  75 </FONT></TD>\r
  76 </TR>\r
  77 </TABLE>\r
  78 <A NAME="skip-navbar_top"></A>\r
  79 <!-- ========= END OF TOP NAVBAR ========= -->\r
  80 \r
  81 <HR>\r
  82 <H2>\r
  83 Package compbio.engine.conf\r
  84 </H2>\r
  85 Classes commonly used by both engines.\r
  86 <P>\r
  87 <B>See:</B>\r
  88 <BR>\r
  89 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<A HREF="#package_description"><B>Description</B></A>\r
  90 <P>\r
  91 \r
  92 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
  93 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
  94 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
  95 <B>Class Summary</B></FONT></TH>\r
  96 </TR>\r
  97 <TR BGCOLOR="white" CLASS="TableRowColor">\r
  98 <TD WIDTH="15%"><B><A HREF="../../../compbio/engine/conf/_Key.html" title="class in compbio.engine.conf">_Key</A></B></TD>\r
  99 <TD>&nbsp;</TD>\r
 100 </TR>\r
 101 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 102 <TD WIDTH="15%"><B><A HREF="../../../compbio/engine/conf/DirectoryManager.html" title="class in compbio.engine.conf">DirectoryManager</A></B></TD>\r
 103 <TD>&nbsp;</TD>\r
 104 </TR>\r
 105 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 106 <TD WIDTH="15%"><B><A HREF="../../../compbio/engine/conf/PropertyHelperManager.html" title="class in compbio.engine.conf">PropertyHelperManager</A></B></TD>\r
 107 <TD>&nbsp;</TD>\r
 108 </TR>\r
 109 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 110 <TD WIDTH="15%"><B><A HREF="../../../compbio/engine/conf/RunnerConfigMarshaller.html" title="class in compbio.engine.conf">RunnerConfigMarshaller&lt;T&gt;</A></B></TD>\r
 111 <TD>&nbsp;</TD>\r
 112 </TR>\r
 113 </TABLE>\r
 114 &nbsp;\r
 115 \r
 116 <P>\r
 117 <A NAME="package_description"><!-- --></A><H2>\r
 118 Package compbio.engine.conf Description\r
 119 </H2>\r
 120 \r
 121 <P>\r
 122 Classes commonly used by both engines.\r
 123 <P>\r
 124 \r
 125 <P>\r
 126 <DL>\r
 127 <DT><B>Author:</B></DT>\r
 128   <DD>Petr Troshin
 129
 130         Date January 2010</DD>\r
 131 </DL>\r
 132 <HR>\r
 133 \r
 134 \r
 135 <!-- ======= START OF BOTTOM NAVBAR ====== -->\r
 136 <A NAME="navbar_bottom"><!-- --></A>\r
 137 <A HREF="#skip-navbar_bottom" title="Skip navigation links"></A>\r
 138 <TABLE BORDER="0" WIDTH="100%" CELLPADDING="1" CELLSPACING="0" SUMMARY="">\r
 139 <TR>\r
 140 <TD COLSPAN=2 BGCOLOR="#EEEEFF" CLASS="NavBarCell1">\r
 141 <A NAME="navbar_bottom_firstrow"><!-- --></A>\r
 142 <TABLE BORDER="0" CELLPADDING="0" CELLSPACING="3" SUMMARY="">\r
 143   <TR ALIGN="center" VALIGN="top">\r
 144   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../overview-summary.html"><FONT CLASS="NavBarFont1"><B>Overview</B></FONT></A>&nbsp;</TD>\r
 145   <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> &nbsp;<FONT CLASS="NavBarFont1Rev"><B>Package</B></FONT>&nbsp;</TD>\r
 146   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <FONT CLASS="NavBarFont1">Class</FONT>&nbsp;</TD>\r
 147   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="package-use.html"><FONT CLASS="NavBarFont1"><B>Use</B></FONT></A>&nbsp;</TD>\r
 148   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="package-tree.html"><FONT CLASS="NavBarFont1"><B>Tree</B></FONT></A>&nbsp;</TD>\r
 149   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../deprecated-list.html"><FONT CLASS="NavBarFont1"><B>Deprecated</B></FONT></A>&nbsp;</TD>\r
 150   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../index-files/index-1.html"><FONT CLASS="NavBarFont1"><B>Index</B></FONT></A>&nbsp;</TD>\r
 151   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../help-doc.html"><FONT CLASS="NavBarFont1"><B>Help</B></FONT></A>&nbsp;</TD>\r
 152   </TR>\r
 153 </TABLE>\r
 154 </TD>\r
 155 <TD ALIGN="right" VALIGN="top" ROWSPAN=3><EM>\r
 156 </EM>\r
 157 </TD>\r
 158 </TR>\r
 159 \r
 160 <TR>\r
 161 <TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">\r
 162 &nbsp;<A HREF="../../../compbio/engine/cluster/dundee/package-summary.html"><B>PREV PACKAGE</B></A>&nbsp;\r
 163 &nbsp;<A HREF="../../../compbio/engine/local/package-summary.html"><B>NEXT PACKAGE</B></A></FONT></TD>\r
 164 <TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">\r
 165   <A HREF="../../../index.html?compbio/engine/conf/package-summary.html" target="_top"><B>FRAMES</B></A>  &nbsp;\r
 166 &nbsp;<A HREF="package-summary.html" target="_top"><B>NO FRAMES</B></A>  &nbsp;\r
 167 &nbsp;<SCRIPT type="text/javascript">\r
 168   <!--\r
 169   if(window==top) {\r
 170     document.writeln('<A HREF="../../../allclasses-noframe.html"><B>All Classes</B></A>');\r
 171   }\r
 172   //-->\r
 173 </SCRIPT>\r
 174 <NOSCRIPT>\r
 175   <A HREF="../../../allclasses-noframe.html"><B>All Classes</B></A>\r
 176 </NOSCRIPT>\r
 177 \r
 178 \r
 179 </FONT></TD>\r
 180 </TR>\r
 181 </TABLE>\r
 182 <A NAME="skip-navbar_bottom"></A>\r
 183 <!-- ======== END OF BOTTOM NAVBAR ======= -->\r
 184 \r
 185 <HR>\r
 186 \r
 187 </BODY>\r
 188 </HTML>\r