wsbuild.log

   1
   2 build-server:
   3    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/AAConWS.wsdl
   4    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/AAConWS_schema1.xsd
   5    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/ClustalWS.wsdl
   6    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/ClustalWS_schema1.xsd
   7    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/DisemblWS.wsdl
   8    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/DisemblWS_schema1.xsd
   9    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/GlobPlotWS.wsdl
  10    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/GlobPlotWS_schema1.xsd
  11    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/IUPredWS.wsdl
  12    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/IUPredWS_schema1.xsd
  13    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/JpredWS.wsdl
  14    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/JpredWS_schema1.xsd
  15    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/JronnWS.wsdl
  16    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/JronnWS_schema1.xsd
  17    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/MafftWS.wsdl
  18    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/MafftWS_schema1.xsd
  19    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/MuscleWS.wsdl
  20    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/MuscleWS_schema1.xsd
  21    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/RNAalifoldWS.wsdl
  22    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/RNAalifoldWS_schema1.xsd
  23    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/RegistryWS.wsdl
  24    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/RegistryWS_schema1.xsd
  25    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/TcoffeeWS.wsdl
  26    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/TcoffeeWS_schema1.xsd
  27     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.JpredWS
  28     [wsgen] Note:       ap round: 1
  29     [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS<T>]
  30     [wsgen] [should process method: align hasWebMethods: false ]
  31     [wsgen] [endpointReferencesInterface: true]
  32     [wsgen] [declaring class has WebSevice: true]
  33     [wsgen] [returning: true]
  34     [wsgen] [WrapperGen - method: align(java.util.List<compbio.data.sequence.FastaSequence>)]
  35     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
  36     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align]
  37     [wsgen] [should process method: customAlign hasWebMethods: false ]
  38     [wsgen] [endpointReferencesInterface: true]
  39     [wsgen] [declaring class has WebSevice: true]
  40     [wsgen] [returning: true]
  41     [wsgen] [WrapperGen - method: customAlign(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
  42     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
  43     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign]
  44     [wsgen] [should process method: presetAlign hasWebMethods: false ]
  45     [wsgen] [endpointReferencesInterface: true]
  46     [wsgen] [declaring class has WebSevice: true]
  47     [wsgen] [returning: true]
  48     [wsgen] [WrapperGen - method: presetAlign(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
  49     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
  50     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign]
  51     [wsgen] [should process method: getResult hasWebMethods: false ]
  52     [wsgen] [endpointReferencesInterface: true]
  53     [wsgen] [declaring class has WebSevice: true]
  54     [wsgen] [returning: true]
  55     [wsgen] [WrapperGen - method: getResult(java.lang.String)]
  56     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
  57     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult]
  58     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
  59     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
  60     [wsgen] [should process method: cancelJob hasWebMethods: false ]
  61     [wsgen] [endpointReferencesInterface: true]
  62     [wsgen] [declaring class has WebSevice: false]
  63     [wsgen] [returning: true]
  64     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
  65     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
  66     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
  67     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
  68     [wsgen] [endpointReferencesInterface: true]
  69     [wsgen] [declaring class has WebSevice: false]
  70     [wsgen] [returning: true]
  71     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
  72     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
  73     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
  74     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
  75     [wsgen] [endpointReferencesInterface: true]
  76     [wsgen] [declaring class has WebSevice: false]
  77     [wsgen] [returning: true]
  78     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
  79     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
  80     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
  81     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
  82     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
  83     [wsgen] [endpointReferencesInterface: true]
  84     [wsgen] [declaring class has WebSevice: false]
  85     [wsgen] [returning: true]
  86     [wsgen] [WrapperGen - method: getRunnerOptions()]
  87     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
  88     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
  89     [wsgen] [should process method: getPresets hasWebMethods: false ]
  90     [wsgen] [endpointReferencesInterface: true]
  91     [wsgen] [declaring class has WebSevice: false]
  92     [wsgen] [returning: true]
  93     [wsgen] [WrapperGen - method: getPresets()]
  94     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
  95     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
  96     [wsgen] [should process method: getLimit hasWebMethods: false ]
  97     [wsgen] [endpointReferencesInterface: true]
  98     [wsgen] [declaring class has WebSevice: false]
  99     [wsgen] [returning: true]
 100     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 101     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 102     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 103     [wsgen] [should process method: getLimits hasWebMethods: false ]
 104     [wsgen] [endpointReferencesInterface: true]
 105     [wsgen] [declaring class has WebSevice: false]
 106     [wsgen] [returning: true]
 107     [wsgen] [WrapperGen - method: getLimits()]
 108     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 109     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 110     [wsgen] compbio/data/msa/jaxws/Align.java
 111     [wsgen] compbio/data/msa/jaxws/AlignResponse.java
 112     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 113     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 114     [wsgen] compbio/data/msa/jaxws/CustomAlign.java
 115     [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java
 116     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 117     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 118     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 119     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 120     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 121     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 122     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 123     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 124     [wsgen] compbio/data/msa/jaxws/GetResult.java
 125     [wsgen] compbio/data/msa/jaxws/GetResultResponse.java
 126     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 127     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 128     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 129     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 130     [wsgen] compbio/data/msa/jaxws/PresetAlign.java
 131     [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java
 132     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 133     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 134     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 135     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 136     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 137     [wsgen] Note:       ap round: 2
 138     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.AAConWS
 139     [wsgen] Note:       ap round: 1
 140     [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation<T>]
 141     [wsgen] [should process method: analize hasWebMethods: false ]
 142     [wsgen] [endpointReferencesInterface: true]
 143     [wsgen] [declaring class has WebSevice: true]
 144     [wsgen] [returning: true]
 145     [wsgen] [WrapperGen - method: analize(java.util.List<compbio.data.sequence.FastaSequence>)]
 146     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 147     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize]
 148     [wsgen] [should process method: customAnalize hasWebMethods: false ]
 149     [wsgen] [endpointReferencesInterface: true]
 150     [wsgen] [declaring class has WebSevice: true]
 151     [wsgen] [returning: true]
 152     [wsgen] [WrapperGen - method: customAnalize(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 153     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 154     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize]
 155     [wsgen] [should process method: presetAnalize hasWebMethods: false ]
 156     [wsgen] [endpointReferencesInterface: true]
 157     [wsgen] [declaring class has WebSevice: true]
 158     [wsgen] [returning: true]
 159     [wsgen] [WrapperGen - method: presetAnalize(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 160     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 161     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize]
 162     [wsgen] [should process method: getAnnotation hasWebMethods: false ]
 163     [wsgen] [endpointReferencesInterface: true]
 164     [wsgen] [declaring class has WebSevice: true]
 165     [wsgen] [returning: true]
 166     [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)]
 167     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 168     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation]
 169     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 170     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 171     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 172     [wsgen] [endpointReferencesInterface: true]
 173     [wsgen] [declaring class has WebSevice: false]
 174     [wsgen] [returning: true]
 175     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 176     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 177     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 178     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 179     [wsgen] [endpointReferencesInterface: true]
 180     [wsgen] [declaring class has WebSevice: false]
 181     [wsgen] [returning: true]
 182     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 183     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 184     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 185     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 186     [wsgen] [endpointReferencesInterface: true]
 187     [wsgen] [declaring class has WebSevice: false]
 188     [wsgen] [returning: true]
 189     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 190     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 191     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 192     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 193     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 194     [wsgen] [endpointReferencesInterface: true]
 195     [wsgen] [declaring class has WebSevice: false]
 196     [wsgen] [returning: true]
 197     [wsgen] [WrapperGen - method: getRunnerOptions()]
 198     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 199     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 200     [wsgen] [should process method: getPresets hasWebMethods: false ]
 201     [wsgen] [endpointReferencesInterface: true]
 202     [wsgen] [declaring class has WebSevice: false]
 203     [wsgen] [returning: true]
 204     [wsgen] [WrapperGen - method: getPresets()]
 205     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 206     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 207     [wsgen] [should process method: getLimit hasWebMethods: false ]
 208     [wsgen] [endpointReferencesInterface: true]
 209     [wsgen] [declaring class has WebSevice: false]
 210     [wsgen] [returning: true]
 211     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 212     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 213     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 214     [wsgen] [should process method: getLimits hasWebMethods: false ]
 215     [wsgen] [endpointReferencesInterface: true]
 216     [wsgen] [declaring class has WebSevice: false]
 217     [wsgen] [returning: true]
 218     [wsgen] [WrapperGen - method: getLimits()]
 219     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 220     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 221     [wsgen] compbio/data/msa/jaxws/Analize.java
 222     [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java
 223     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 224     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 225     [wsgen] compbio/data/msa/jaxws/CustomAnalize.java
 226     [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java
 227     [wsgen] compbio/data/msa/jaxws/GetAnnotation.java
 228     [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java
 229     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 230     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 231     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 232     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 233     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 234     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 235     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 236     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 237     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 238     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 239     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 240     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 241     [wsgen] compbio/data/msa/jaxws/PresetAnalize.java
 242     [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java
 243     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 244     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 245     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 246     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 247     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 248     [wsgen] Note:       ap round: 2
 249     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.ClustalWS
 250     [wsgen] Note:       ap round: 1
 251     [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS<T>]
 252     [wsgen] [should process method: align hasWebMethods: false ]
 253     [wsgen] [endpointReferencesInterface: true]
 254     [wsgen] [declaring class has WebSevice: true]
 255     [wsgen] [returning: true]
 256     [wsgen] [WrapperGen - method: align(java.util.List<compbio.data.sequence.FastaSequence>)]
 257     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 258     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align]
 259     [wsgen] [should process method: customAlign hasWebMethods: false ]
 260     [wsgen] [endpointReferencesInterface: true]
 261     [wsgen] [declaring class has WebSevice: true]
 262     [wsgen] [returning: true]
 263     [wsgen] [WrapperGen - method: customAlign(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 264     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 265     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign]
 266     [wsgen] [should process method: presetAlign hasWebMethods: false ]
 267     [wsgen] [endpointReferencesInterface: true]
 268     [wsgen] [declaring class has WebSevice: true]
 269     [wsgen] [returning: true]
 270     [wsgen] [WrapperGen - method: presetAlign(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 271     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 272     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign]
 273     [wsgen] [should process method: getResult hasWebMethods: false ]
 274     [wsgen] [endpointReferencesInterface: true]
 275     [wsgen] [declaring class has WebSevice: true]
 276     [wsgen] [returning: true]
 277     [wsgen] [WrapperGen - method: getResult(java.lang.String)]
 278     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 279     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult]
 280     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 281     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 282     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 283     [wsgen] [endpointReferencesInterface: true]
 284     [wsgen] [declaring class has WebSevice: false]
 285     [wsgen] [returning: true]
 286     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 287     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 288     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 289     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 290     [wsgen] [endpointReferencesInterface: true]
 291     [wsgen] [declaring class has WebSevice: false]
 292     [wsgen] [returning: true]
 293     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 294     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 295     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 296     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 297     [wsgen] [endpointReferencesInterface: true]
 298     [wsgen] [declaring class has WebSevice: false]
 299     [wsgen] [returning: true]
 300     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 301     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 302     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 303     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 304     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 305     [wsgen] [endpointReferencesInterface: true]
 306     [wsgen] [declaring class has WebSevice: false]
 307     [wsgen] [returning: true]
 308     [wsgen] [WrapperGen - method: getRunnerOptions()]
 309     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 310     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 311     [wsgen] [should process method: getPresets hasWebMethods: false ]
 312     [wsgen] [endpointReferencesInterface: true]
 313     [wsgen] [declaring class has WebSevice: false]
 314     [wsgen] [returning: true]
 315     [wsgen] [WrapperGen - method: getPresets()]
 316     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 317     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 318     [wsgen] [should process method: getLimit hasWebMethods: false ]
 319     [wsgen] [endpointReferencesInterface: true]
 320     [wsgen] [declaring class has WebSevice: false]
 321     [wsgen] [returning: true]
 322     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 323     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 324     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 325     [wsgen] [should process method: getLimits hasWebMethods: false ]
 326     [wsgen] [endpointReferencesInterface: true]
 327     [wsgen] [declaring class has WebSevice: false]
 328     [wsgen] [returning: true]
 329     [wsgen] [WrapperGen - method: getLimits()]
 330     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 331     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 332     [wsgen] compbio/data/msa/jaxws/Align.java
 333     [wsgen] compbio/data/msa/jaxws/AlignResponse.java
 334     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 335     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 336     [wsgen] compbio/data/msa/jaxws/CustomAlign.java
 337     [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java
 338     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 339     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 340     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 341     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 342     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 343     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 344     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 345     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 346     [wsgen] compbio/data/msa/jaxws/GetResult.java
 347     [wsgen] compbio/data/msa/jaxws/GetResultResponse.java
 348     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 349     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 350     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 351     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 352     [wsgen] compbio/data/msa/jaxws/PresetAlign.java
 353     [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java
 354     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 355     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 356     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 357     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 358     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 359     [wsgen] Note:       ap round: 2
 360     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.MuscleWS
 361     [wsgen] Note:       ap round: 1
 362     [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS<T>]
 363     [wsgen] [should process method: align hasWebMethods: false ]
 364     [wsgen] [endpointReferencesInterface: true]
 365     [wsgen] [declaring class has WebSevice: true]
 366     [wsgen] [returning: true]
 367     [wsgen] [WrapperGen - method: align(java.util.List<compbio.data.sequence.FastaSequence>)]
 368     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 369     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align]
 370     [wsgen] [should process method: customAlign hasWebMethods: false ]
 371     [wsgen] [endpointReferencesInterface: true]
 372     [wsgen] [declaring class has WebSevice: true]
 373     [wsgen] [returning: true]
 374     [wsgen] [WrapperGen - method: customAlign(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 375     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 376     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign]
 377     [wsgen] [should process method: presetAlign hasWebMethods: false ]
 378     [wsgen] [endpointReferencesInterface: true]
 379     [wsgen] [declaring class has WebSevice: true]
 380     [wsgen] [returning: true]
 381     [wsgen] [WrapperGen - method: presetAlign(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 382     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 383     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign]
 384     [wsgen] [should process method: getResult hasWebMethods: false ]
 385     [wsgen] [endpointReferencesInterface: true]
 386     [wsgen] [declaring class has WebSevice: true]
 387     [wsgen] [returning: true]
 388     [wsgen] [WrapperGen - method: getResult(java.lang.String)]
 389     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 390     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult]
 391     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 392     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 393     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 394     [wsgen] [endpointReferencesInterface: true]
 395     [wsgen] [declaring class has WebSevice: false]
 396     [wsgen] [returning: true]
 397     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 398     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 399     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 400     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 401     [wsgen] [endpointReferencesInterface: true]
 402     [wsgen] [declaring class has WebSevice: false]
 403     [wsgen] [returning: true]
 404     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 405     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 406     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 407     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 408     [wsgen] [endpointReferencesInterface: true]
 409     [wsgen] [declaring class has WebSevice: false]
 410     [wsgen] [returning: true]
 411     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 412     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 413     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 414     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 415     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 416     [wsgen] [endpointReferencesInterface: true]
 417     [wsgen] [declaring class has WebSevice: false]
 418     [wsgen] [returning: true]
 419     [wsgen] [WrapperGen - method: getRunnerOptions()]
 420     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 421     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 422     [wsgen] [should process method: getPresets hasWebMethods: false ]
 423     [wsgen] [endpointReferencesInterface: true]
 424     [wsgen] [declaring class has WebSevice: false]
 425     [wsgen] [returning: true]
 426     [wsgen] [WrapperGen - method: getPresets()]
 427     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 428     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 429     [wsgen] [should process method: getLimit hasWebMethods: false ]
 430     [wsgen] [endpointReferencesInterface: true]
 431     [wsgen] [declaring class has WebSevice: false]
 432     [wsgen] [returning: true]
 433     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 434     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 435     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 436     [wsgen] [should process method: getLimits hasWebMethods: false ]
 437     [wsgen] [endpointReferencesInterface: true]
 438     [wsgen] [declaring class has WebSevice: false]
 439     [wsgen] [returning: true]
 440     [wsgen] [WrapperGen - method: getLimits()]
 441     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 442     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 443     [wsgen] compbio/data/msa/jaxws/Align.java
 444     [wsgen] compbio/data/msa/jaxws/AlignResponse.java
 445     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 446     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 447     [wsgen] compbio/data/msa/jaxws/CustomAlign.java
 448     [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java
 449     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 450     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 451     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 452     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 453     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 454     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 455     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 456     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 457     [wsgen] compbio/data/msa/jaxws/GetResult.java
 458     [wsgen] compbio/data/msa/jaxws/GetResultResponse.java
 459     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 460     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 461     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 462     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 463     [wsgen] compbio/data/msa/jaxws/PresetAlign.java
 464     [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java
 465     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 466     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 467     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 468     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 469     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 470     [wsgen] Note:       ap round: 2
 471     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.MafftWS
 472     [wsgen] Note:       ap round: 1
 473     [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS<T>]
 474     [wsgen] [should process method: align hasWebMethods: false ]
 475     [wsgen] [endpointReferencesInterface: true]
 476     [wsgen] [declaring class has WebSevice: true]
 477     [wsgen] [returning: true]
 478     [wsgen] [WrapperGen - method: align(java.util.List<compbio.data.sequence.FastaSequence>)]
 479     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 480     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align]
 481     [wsgen] [should process method: customAlign hasWebMethods: false ]
 482     [wsgen] [endpointReferencesInterface: true]
 483     [wsgen] [declaring class has WebSevice: true]
 484     [wsgen] [returning: true]
 485     [wsgen] [WrapperGen - method: customAlign(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 486     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 487     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign]
 488     [wsgen] [should process method: presetAlign hasWebMethods: false ]
 489     [wsgen] [endpointReferencesInterface: true]
 490     [wsgen] [declaring class has WebSevice: true]
 491     [wsgen] [returning: true]
 492     [wsgen] [WrapperGen - method: presetAlign(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 493     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 494     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign]
 495     [wsgen] [should process method: getResult hasWebMethods: false ]
 496     [wsgen] [endpointReferencesInterface: true]
 497     [wsgen] [declaring class has WebSevice: true]
 498     [wsgen] [returning: true]
 499     [wsgen] [WrapperGen - method: getResult(java.lang.String)]
 500     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 501     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult]
 502     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 503     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 504     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 505     [wsgen] [endpointReferencesInterface: true]
 506     [wsgen] [declaring class has WebSevice: false]
 507     [wsgen] [returning: true]
 508     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 509     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 510     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 511     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 512     [wsgen] [endpointReferencesInterface: true]
 513     [wsgen] [declaring class has WebSevice: false]
 514     [wsgen] [returning: true]
 515     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 516     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 517     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 518     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 519     [wsgen] [endpointReferencesInterface: true]
 520     [wsgen] [declaring class has WebSevice: false]
 521     [wsgen] [returning: true]
 522     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 523     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 524     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 525     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 526     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 527     [wsgen] [endpointReferencesInterface: true]
 528     [wsgen] [declaring class has WebSevice: false]
 529     [wsgen] [returning: true]
 530     [wsgen] [WrapperGen - method: getRunnerOptions()]
 531     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 532     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 533     [wsgen] [should process method: getPresets hasWebMethods: false ]
 534     [wsgen] [endpointReferencesInterface: true]
 535     [wsgen] [declaring class has WebSevice: false]
 536     [wsgen] [returning: true]
 537     [wsgen] [WrapperGen - method: getPresets()]
 538     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 539     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 540     [wsgen] [should process method: getLimit hasWebMethods: false ]
 541     [wsgen] [endpointReferencesInterface: true]
 542     [wsgen] [declaring class has WebSevice: false]
 543     [wsgen] [returning: true]
 544     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 545     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 546     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 547     [wsgen] [should process method: getLimits hasWebMethods: false ]
 548     [wsgen] [endpointReferencesInterface: true]
 549     [wsgen] [declaring class has WebSevice: false]
 550     [wsgen] [returning: true]
 551     [wsgen] [WrapperGen - method: getLimits()]
 552     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 553     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 554     [wsgen] compbio/data/msa/jaxws/Align.java
 555     [wsgen] compbio/data/msa/jaxws/AlignResponse.java
 556     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 557     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 558     [wsgen] compbio/data/msa/jaxws/CustomAlign.java
 559     [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java
 560     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 561     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 562     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 563     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 564     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 565     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 566     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 567     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 568     [wsgen] compbio/data/msa/jaxws/GetResult.java
 569     [wsgen] compbio/data/msa/jaxws/GetResultResponse.java
 570     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 571     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 572     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 573     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 574     [wsgen] compbio/data/msa/jaxws/PresetAlign.java
 575     [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java
 576     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 577     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 578     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 579     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 580     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 581     [wsgen] Note:       ap round: 2
 582     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.TcoffeeWS
 583     [wsgen] Note:       ap round: 1
 584     [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS<T>]
 585     [wsgen] [should process method: align hasWebMethods: false ]
 586     [wsgen] [endpointReferencesInterface: true]
 587     [wsgen] [declaring class has WebSevice: true]
 588     [wsgen] [returning: true]
 589     [wsgen] [WrapperGen - method: align(java.util.List<compbio.data.sequence.FastaSequence>)]
 590     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 591     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align]
 592     [wsgen] [should process method: customAlign hasWebMethods: false ]
 593     [wsgen] [endpointReferencesInterface: true]
 594     [wsgen] [declaring class has WebSevice: true]
 595     [wsgen] [returning: true]
 596     [wsgen] [WrapperGen - method: customAlign(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 597     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 598     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign]
 599     [wsgen] [should process method: presetAlign hasWebMethods: false ]
 600     [wsgen] [endpointReferencesInterface: true]
 601     [wsgen] [declaring class has WebSevice: true]
 602     [wsgen] [returning: true]
 603     [wsgen] [WrapperGen - method: presetAlign(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 604     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 605     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign]
 606     [wsgen] [should process method: getResult hasWebMethods: false ]
 607     [wsgen] [endpointReferencesInterface: true]
 608     [wsgen] [declaring class has WebSevice: true]
 609     [wsgen] [returning: true]
 610     [wsgen] [WrapperGen - method: getResult(java.lang.String)]
 611     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 612     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult]
 613     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 614     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 615     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 616     [wsgen] [endpointReferencesInterface: true]
 617     [wsgen] [declaring class has WebSevice: false]
 618     [wsgen] [returning: true]
 619     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 620     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 621     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 622     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 623     [wsgen] [endpointReferencesInterface: true]
 624     [wsgen] [declaring class has WebSevice: false]
 625     [wsgen] [returning: true]
 626     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 627     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 628     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 629     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 630     [wsgen] [endpointReferencesInterface: true]
 631     [wsgen] [declaring class has WebSevice: false]
 632     [wsgen] [returning: true]
 633     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 634     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 635     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 636     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 637     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 638     [wsgen] [endpointReferencesInterface: true]
 639     [wsgen] [declaring class has WebSevice: false]
 640     [wsgen] [returning: true]
 641     [wsgen] [WrapperGen - method: getRunnerOptions()]
 642     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 643     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 644     [wsgen] [should process method: getPresets hasWebMethods: false ]
 645     [wsgen] [endpointReferencesInterface: true]
 646     [wsgen] [declaring class has WebSevice: false]
 647     [wsgen] [returning: true]
 648     [wsgen] [WrapperGen - method: getPresets()]
 649     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 650     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 651     [wsgen] [should process method: getLimit hasWebMethods: false ]
 652     [wsgen] [endpointReferencesInterface: true]
 653     [wsgen] [declaring class has WebSevice: false]
 654     [wsgen] [returning: true]
 655     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 656     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 657     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 658     [wsgen] [should process method: getLimits hasWebMethods: false ]
 659     [wsgen] [endpointReferencesInterface: true]
 660     [wsgen] [declaring class has WebSevice: false]
 661     [wsgen] [returning: true]
 662     [wsgen] [WrapperGen - method: getLimits()]
 663     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 664     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 665     [wsgen] compbio/data/msa/jaxws/Align.java
 666     [wsgen] compbio/data/msa/jaxws/AlignResponse.java
 667     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 668     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 669     [wsgen] compbio/data/msa/jaxws/CustomAlign.java
 670     [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java
 671     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 672     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 673     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 674     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 675     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 676     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 677     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 678     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 679     [wsgen] compbio/data/msa/jaxws/GetResult.java
 680     [wsgen] compbio/data/msa/jaxws/GetResultResponse.java
 681     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 682     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 683     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 684     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 685     [wsgen] compbio/data/msa/jaxws/PresetAlign.java
 686     [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java
 687     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 688     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 689     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 690     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 691     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 692     [wsgen] Note:       ap round: 2
 693     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.DisemblWS
 694     [wsgen] Note:       ap round: 1
 695     [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation<T>]
 696     [wsgen] [should process method: analize hasWebMethods: false ]
 697     [wsgen] [endpointReferencesInterface: true]
 698     [wsgen] [declaring class has WebSevice: true]
 699     [wsgen] [returning: true]
 700     [wsgen] [WrapperGen - method: analize(java.util.List<compbio.data.sequence.FastaSequence>)]
 701     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 702     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize]
 703     [wsgen] [should process method: customAnalize hasWebMethods: false ]
 704     [wsgen] [endpointReferencesInterface: true]
 705     [wsgen] [declaring class has WebSevice: true]
 706     [wsgen] [returning: true]
 707     [wsgen] [WrapperGen - method: customAnalize(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 708     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 709     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize]
 710     [wsgen] [should process method: presetAnalize hasWebMethods: false ]
 711     [wsgen] [endpointReferencesInterface: true]
 712     [wsgen] [declaring class has WebSevice: true]
 713     [wsgen] [returning: true]
 714     [wsgen] [WrapperGen - method: presetAnalize(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 715     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 716     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize]
 717     [wsgen] [should process method: getAnnotation hasWebMethods: false ]
 718     [wsgen] [endpointReferencesInterface: true]
 719     [wsgen] [declaring class has WebSevice: true]
 720     [wsgen] [returning: true]
 721     [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)]
 722     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 723     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation]
 724     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 725     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 726     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 727     [wsgen] [endpointReferencesInterface: true]
 728     [wsgen] [declaring class has WebSevice: false]
 729     [wsgen] [returning: true]
 730     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 731     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 732     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 733     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 734     [wsgen] [endpointReferencesInterface: true]
 735     [wsgen] [declaring class has WebSevice: false]
 736     [wsgen] [returning: true]
 737     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 738     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 739     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 740     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 741     [wsgen] [endpointReferencesInterface: true]
 742     [wsgen] [declaring class has WebSevice: false]
 743     [wsgen] [returning: true]
 744     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 745     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 746     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 747     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 748     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 749     [wsgen] [endpointReferencesInterface: true]
 750     [wsgen] [declaring class has WebSevice: false]
 751     [wsgen] [returning: true]
 752     [wsgen] [WrapperGen - method: getRunnerOptions()]
 753     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 754     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 755     [wsgen] [should process method: getPresets hasWebMethods: false ]
 756     [wsgen] [endpointReferencesInterface: true]
 757     [wsgen] [declaring class has WebSevice: false]
 758     [wsgen] [returning: true]
 759     [wsgen] [WrapperGen - method: getPresets()]
 760     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 761     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 762     [wsgen] [should process method: getLimit hasWebMethods: false ]
 763     [wsgen] [endpointReferencesInterface: true]
 764     [wsgen] [declaring class has WebSevice: false]
 765     [wsgen] [returning: true]
 766     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 767     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 768     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 769     [wsgen] [should process method: getLimits hasWebMethods: false ]
 770     [wsgen] [endpointReferencesInterface: true]
 771     [wsgen] [declaring class has WebSevice: false]
 772     [wsgen] [returning: true]
 773     [wsgen] [WrapperGen - method: getLimits()]
 774     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 775     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 776     [wsgen] compbio/data/msa/jaxws/Analize.java
 777     [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java
 778     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 779     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 780     [wsgen] compbio/data/msa/jaxws/CustomAnalize.java
 781     [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java
 782     [wsgen] compbio/data/msa/jaxws/GetAnnotation.java
 783     [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java
 784     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 785     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 786     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 787     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 788     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 789     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 790     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 791     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 792     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 793     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 794     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 795     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 796     [wsgen] compbio/data/msa/jaxws/PresetAnalize.java
 797     [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java
 798     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 799     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 800     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 801     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 802     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 803     [wsgen] Note:       ap round: 2
 804     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.GlobPlotWS
 805     [wsgen] Note:       ap round: 1
 806     [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation<T>]
 807     [wsgen] [should process method: analize hasWebMethods: false ]
 808     [wsgen] [endpointReferencesInterface: true]
 809     [wsgen] [declaring class has WebSevice: true]
 810     [wsgen] [returning: true]
 811     [wsgen] [WrapperGen - method: analize(java.util.List<compbio.data.sequence.FastaSequence>)]
 812     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 813     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize]
 814     [wsgen] [should process method: customAnalize hasWebMethods: false ]
 815     [wsgen] [endpointReferencesInterface: true]
 816     [wsgen] [declaring class has WebSevice: true]
 817     [wsgen] [returning: true]
 818     [wsgen] [WrapperGen - method: customAnalize(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 819     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 820     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize]
 821     [wsgen] [should process method: presetAnalize hasWebMethods: false ]
 822     [wsgen] [endpointReferencesInterface: true]
 823     [wsgen] [declaring class has WebSevice: true]
 824     [wsgen] [returning: true]
 825     [wsgen] [WrapperGen - method: presetAnalize(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 826     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 827     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize]
 828     [wsgen] [should process method: getAnnotation hasWebMethods: false ]
 829     [wsgen] [endpointReferencesInterface: true]
 830     [wsgen] [declaring class has WebSevice: true]
 831     [wsgen] [returning: true]
 832     [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)]
 833     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 834     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation]
 835     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 836     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 837     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 838     [wsgen] [endpointReferencesInterface: true]
 839     [wsgen] [declaring class has WebSevice: false]
 840     [wsgen] [returning: true]
 841     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 842     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 843     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 844     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 845     [wsgen] [endpointReferencesInterface: true]
 846     [wsgen] [declaring class has WebSevice: false]
 847     [wsgen] [returning: true]
 848     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 849     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 850     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 851     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 852     [wsgen] [endpointReferencesInterface: true]
 853     [wsgen] [declaring class has WebSevice: false]
 854     [wsgen] [returning: true]
 855     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 856     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 857     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 858     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 859     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 860     [wsgen] [endpointReferencesInterface: true]
 861     [wsgen] [declaring class has WebSevice: false]
 862     [wsgen] [returning: true]
 863     [wsgen] [WrapperGen - method: getRunnerOptions()]
 864     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 865     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 866     [wsgen] [should process method: getPresets hasWebMethods: false ]
 867     [wsgen] [endpointReferencesInterface: true]
 868     [wsgen] [declaring class has WebSevice: false]
 869     [wsgen] [returning: true]
 870     [wsgen] [WrapperGen - method: getPresets()]
 871     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 872     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 873     [wsgen] [should process method: getLimit hasWebMethods: false ]
 874     [wsgen] [endpointReferencesInterface: true]
 875     [wsgen] [declaring class has WebSevice: false]
 876     [wsgen] [returning: true]
 877     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 878     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 879     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 880     [wsgen] [should process method: getLimits hasWebMethods: false ]
 881     [wsgen] [endpointReferencesInterface: true]
 882     [wsgen] [declaring class has WebSevice: false]
 883     [wsgen] [returning: true]
 884     [wsgen] [WrapperGen - method: getLimits()]
 885     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 886     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 887     [wsgen] compbio/data/msa/jaxws/Analize.java
 888     [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java
 889     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 890     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 891     [wsgen] compbio/data/msa/jaxws/CustomAnalize.java
 892     [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java
 893     [wsgen] compbio/data/msa/jaxws/GetAnnotation.java
 894     [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java
 895     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 896     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 897     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 898     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 899     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 900     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 901     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 902     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 903     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 904     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 905     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 906     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 907     [wsgen] compbio/data/msa/jaxws/PresetAnalize.java
 908     [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java
 909     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 910     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 911     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 912     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 913     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 914     [wsgen] Note:       ap round: 2
 915     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.JronnWS
 916     [wsgen] Note:       ap round: 1
 917     [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation<T>]
 918     [wsgen] [should process method: analize hasWebMethods: false ]
 919     [wsgen] [endpointReferencesInterface: true]
 920     [wsgen] [declaring class has WebSevice: true]
 921     [wsgen] [returning: true]
 922     [wsgen] [WrapperGen - method: analize(java.util.List<compbio.data.sequence.FastaSequence>)]
 923     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 924     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize]
 925     [wsgen] [should process method: customAnalize hasWebMethods: false ]
 926     [wsgen] [endpointReferencesInterface: true]
 927     [wsgen] [declaring class has WebSevice: true]
 928     [wsgen] [returning: true]
 929     [wsgen] [WrapperGen - method: customAnalize(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 930     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 931     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize]
 932     [wsgen] [should process method: presetAnalize hasWebMethods: false ]
 933     [wsgen] [endpointReferencesInterface: true]
 934     [wsgen] [declaring class has WebSevice: true]
 935     [wsgen] [returning: true]
 936     [wsgen] [WrapperGen - method: presetAnalize(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 937     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 938     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize]
 939     [wsgen] [should process method: getAnnotation hasWebMethods: false ]
 940     [wsgen] [endpointReferencesInterface: true]
 941     [wsgen] [declaring class has WebSevice: true]
 942     [wsgen] [returning: true]
 943     [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)]
 944     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 945     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation]
 946     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 947     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 948     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 949     [wsgen] [endpointReferencesInterface: true]
 950     [wsgen] [declaring class has WebSevice: false]
 951     [wsgen] [returning: true]
 952     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 953     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 954     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 955     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 956     [wsgen] [endpointReferencesInterface: true]
 957     [wsgen] [declaring class has WebSevice: false]
 958     [wsgen] [returning: true]
 959     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 960     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 961     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 962     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 963     [wsgen] [endpointReferencesInterface: true]
 964     [wsgen] [declaring class has WebSevice: false]
 965     [wsgen] [returning: true]
 966     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 967     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 968     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 969     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 970     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 971     [wsgen] [endpointReferencesInterface: true]
 972     [wsgen] [declaring class has WebSevice: false]
 973     [wsgen] [returning: true]
 974     [wsgen] [WrapperGen - method: getRunnerOptions()]
 975     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 976     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 977     [wsgen] [should process method: getPresets hasWebMethods: false ]
 978     [wsgen] [endpointReferencesInterface: true]
 979     [wsgen] [declaring class has WebSevice: false]
 980     [wsgen] [returning: true]
 981     [wsgen] [WrapperGen - method: getPresets()]
 982     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 983     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 984     [wsgen] [should process method: getLimit hasWebMethods: false ]
 985     [wsgen] [endpointReferencesInterface: true]
 986     [wsgen] [declaring class has WebSevice: false]
 987     [wsgen] [returning: true]
 988     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 989     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 990     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 991     [wsgen] [should process method: getLimits hasWebMethods: false ]
 992     [wsgen] [endpointReferencesInterface: true]
 993     [wsgen] [declaring class has WebSevice: false]
 994     [wsgen] [returning: true]
 995     [wsgen] [WrapperGen - method: getLimits()]
 996     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 997     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 998     [wsgen] compbio/data/msa/jaxws/Analize.java
 999     [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java
1000     [wsgen] compbio/data/msa/jaxws/CancelJob.java
1001     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
1002     [wsgen] compbio/data/msa/jaxws/CustomAnalize.java
1003     [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java
1004     [wsgen] compbio/data/msa/jaxws/GetAnnotation.java
1005     [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java
1006     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
1007     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
1008     [wsgen] compbio/data/msa/jaxws/GetLimit.java
1009     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
1010     [wsgen] compbio/data/msa/jaxws/GetLimits.java
1011     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
1012     [wsgen] compbio/data/msa/jaxws/GetPresets.java
1013     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
1014     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
1015     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
1016     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
1017     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
1018     [wsgen] compbio/data/msa/jaxws/PresetAnalize.java
1019     [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java
1020     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
1021     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
1022     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
1023     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
1024     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
1025     [wsgen] Note:       ap round: 2
1026     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.IUPredWS
1027     [wsgen] Note:       ap round: 1
1028     [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation<T>]
1029     [wsgen] [should process method: analize hasWebMethods: false ]
1030     [wsgen] [endpointReferencesInterface: true]
1031     [wsgen] [declaring class has WebSevice: true]
1032     [wsgen] [returning: true]
1033     [wsgen] [WrapperGen - method: analize(java.util.List<compbio.data.sequence.FastaSequence>)]
1034     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1035     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize]
1036     [wsgen] [should process method: customAnalize hasWebMethods: false ]
1037     [wsgen] [endpointReferencesInterface: true]
1038     [wsgen] [declaring class has WebSevice: true]
1039     [wsgen] [returning: true]
1040     [wsgen] [WrapperGen - method: customAnalize(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
1041     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1042     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize]
1043     [wsgen] [should process method: presetAnalize hasWebMethods: false ]
1044     [wsgen] [endpointReferencesInterface: true]
1045     [wsgen] [declaring class has WebSevice: true]
1046     [wsgen] [returning: true]
1047     [wsgen] [WrapperGen - method: presetAnalize(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
1048     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1049     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize]
1050     [wsgen] [should process method: getAnnotation hasWebMethods: false ]
1051     [wsgen] [endpointReferencesInterface: true]
1052     [wsgen] [declaring class has WebSevice: true]
1053     [wsgen] [returning: true]
1054     [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)]
1055     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1056     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation]
1057     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
1058     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
1059     [wsgen] [should process method: cancelJob hasWebMethods: false ]
1060     [wsgen] [endpointReferencesInterface: true]
1061     [wsgen] [declaring class has WebSevice: false]
1062     [wsgen] [returning: true]
1063     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
1064     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1065     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
1066     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
1067     [wsgen] [endpointReferencesInterface: true]
1068     [wsgen] [declaring class has WebSevice: false]
1069     [wsgen] [returning: true]
1070     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
1071     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1072     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
1073     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
1074     [wsgen] [endpointReferencesInterface: true]
1075     [wsgen] [declaring class has WebSevice: false]
1076     [wsgen] [returning: true]
1077     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
1078     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1079     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
1080     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
1081     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
1082     [wsgen] [endpointReferencesInterface: true]
1083     [wsgen] [declaring class has WebSevice: false]
1084     [wsgen] [returning: true]
1085     [wsgen] [WrapperGen - method: getRunnerOptions()]
1086     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1087     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
1088     [wsgen] [should process method: getPresets hasWebMethods: false ]
1089     [wsgen] [endpointReferencesInterface: true]
1090     [wsgen] [declaring class has WebSevice: false]
1091     [wsgen] [returning: true]
1092     [wsgen] [WrapperGen - method: getPresets()]
1093     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1094     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
1095     [wsgen] [should process method: getLimit hasWebMethods: false ]
1096     [wsgen] [endpointReferencesInterface: true]
1097     [wsgen] [declaring class has WebSevice: false]
1098     [wsgen] [returning: true]
1099     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
1100     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1101     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
1102     [wsgen] [should process method: getLimits hasWebMethods: false ]
1103     [wsgen] [endpointReferencesInterface: true]
1104     [wsgen] [declaring class has WebSevice: false]
1105     [wsgen] [returning: true]
1106     [wsgen] [WrapperGen - method: getLimits()]
1107     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1108     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
1109     [wsgen] compbio/data/msa/jaxws/Analize.java
1110     [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java
1111     [wsgen] compbio/data/msa/jaxws/CancelJob.java
1112     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
1113     [wsgen] compbio/data/msa/jaxws/CustomAnalize.java
1114     [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java
1115     [wsgen] compbio/data/msa/jaxws/GetAnnotation.java
1116     [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java
1117     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
1118     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
1119     [wsgen] compbio/data/msa/jaxws/GetLimit.java
1120     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
1121     [wsgen] compbio/data/msa/jaxws/GetLimits.java
1122     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
1123     [wsgen] compbio/data/msa/jaxws/GetPresets.java
1124     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
1125     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
1126     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
1127     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
1128     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
1129     [wsgen] compbio/data/msa/jaxws/PresetAnalize.java
1130     [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java
1131     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
1132     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
1133     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
1134     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
1135     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
1136     [wsgen] Note:       ap round: 2
1137     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.RegistryWS
1138     [wsgen] Note:       ap round: 1
1139     [wsgen] [ProcessedMethods Interface: compbio.data.msa.RegistryWS]
1140     [wsgen] [should process method: getSupportedServices hasWebMethods: false ]
1141     [wsgen] [endpointReferencesInterface: true]
1142     [wsgen] [declaring class has WebSevice: true]
1143     [wsgen] [returning: true]
1144     [wsgen] [WrapperGen - method: getSupportedServices()]
1145     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1146     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetSupportedServices]
1147     [wsgen] [should process method: getNonoperatedServices hasWebMethods: false ]
1148     [wsgen] [endpointReferencesInterface: true]
1149     [wsgen] [declaring class has WebSevice: true]
1150     [wsgen] [returning: true]
1151     [wsgen] [WrapperGen - method: getNonoperatedServices()]
1152     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1153     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetNonoperatedServices]
1154     [wsgen] [should process method: getLastTested hasWebMethods: false ]
1155     [wsgen] [endpointReferencesInterface: true]
1156     [wsgen] [declaring class has WebSevice: true]
1157     [wsgen] [returning: true]
1158     [wsgen] [WrapperGen - method: getLastTested(compbio.ws.client.Services)]
1159     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1160     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLastTested]
1161     [wsgen] [should process method: getLastTestedOn hasWebMethods: false ]
1162     [wsgen] [endpointReferencesInterface: true]
1163     [wsgen] [declaring class has WebSevice: true]
1164     [wsgen] [returning: true]
1165     [wsgen] [WrapperGen - method: getLastTestedOn(compbio.ws.client.Services)]
1166     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1167     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLastTestedOn]
1168     [wsgen] [should process method: testAllServices hasWebMethods: false ]
1169     [wsgen] [endpointReferencesInterface: true]
1170     [wsgen] [declaring class has WebSevice: true]
1171     [wsgen] [returning: true]
1172     [wsgen] [WrapperGen - method: testAllServices()]
1173     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1174     [wsgen] [requestWrapper: compbio.data.msa.jaxws.TestAllServices]
1175     [wsgen] [should process method: testService hasWebMethods: false ]
1176     [wsgen] [endpointReferencesInterface: true]
1177     [wsgen] [declaring class has WebSevice: true]
1178     [wsgen] [returning: true]
1179     [wsgen] [WrapperGen - method: testService(compbio.ws.client.Services)]
1180     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1181     [wsgen] [requestWrapper: compbio.data.msa.jaxws.TestService]
1182     [wsgen] [should process method: isOperating hasWebMethods: false ]
1183     [wsgen] [endpointReferencesInterface: true]
1184     [wsgen] [declaring class has WebSevice: true]
1185     [wsgen] [returning: true]
1186     [wsgen] [WrapperGen - method: isOperating(compbio.ws.client.Services)]
1187     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1188     [wsgen] [requestWrapper: compbio.data.msa.jaxws.IsOperating]
1189     [wsgen] [should process method: getServiceDescription hasWebMethods: false ]
1190     [wsgen] [endpointReferencesInterface: true]
1191     [wsgen] [declaring class has WebSevice: true]
1192     [wsgen] [returning: true]
1193     [wsgen] [WrapperGen - method: getServiceDescription(compbio.ws.client.Services)]
1194     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1195     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetServiceDescription]
1196     [wsgen] [should process method: getServiceCategories hasWebMethods: false ]
1197     [wsgen] [endpointReferencesInterface: true]
1198     [wsgen] [declaring class has WebSevice: true]
1199     [wsgen] [returning: true]
1200     [wsgen] [WrapperGen - method: getServiceCategories()]
1201     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1202     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetServiceCategories]
1203     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
1204     [wsgen] compbio/data/msa/jaxws/GetLastTested.java
1205     [wsgen] compbio/data/msa/jaxws/GetLastTestedOn.java
1206     [wsgen] compbio/data/msa/jaxws/GetLastTestedOnResponse.java
1207     [wsgen] compbio/data/msa/jaxws/GetLastTestedResponse.java
1208     [wsgen] compbio/data/msa/jaxws/GetNonoperatedServices.java
1209     [wsgen] compbio/data/msa/jaxws/GetNonoperatedServicesResponse.java
1210     [wsgen] compbio/data/msa/jaxws/GetServiceCategories.java
1211     [wsgen] compbio/data/msa/jaxws/GetServiceCategoriesResponse.java
1212     [wsgen] compbio/data/msa/jaxws/GetServiceDescription.java
1213     [wsgen] compbio/data/msa/jaxws/GetServiceDescriptionResponse.java
1214     [wsgen] compbio/data/msa/jaxws/GetSupportedServices.java
1215     [wsgen] compbio/data/msa/jaxws/GetSupportedServicesResponse.java
1216     [wsgen] compbio/data/msa/jaxws/IsOperating.java
1217     [wsgen] compbio/data/msa/jaxws/IsOperatingResponse.java
1218     [wsgen] compbio/data/msa/jaxws/TestAllServices.java
1219     [wsgen] compbio/data/msa/jaxws/TestAllServicesResponse.java
1220     [wsgen] compbio/data/msa/jaxws/TestService.java
1221     [wsgen] compbio/data/msa/jaxws/TestServiceResponse.java
1222     [wsgen] Note:       ap round: 2
1223     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.RNAalifoldWS
1224     [wsgen] Note:       ap round: 1
1225     [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation<T>]
1226     [wsgen] [should process method: analize hasWebMethods: false ]
1227     [wsgen] [endpointReferencesInterface: true]
1228     [wsgen] [declaring class has WebSevice: true]
1229     [wsgen] [returning: true]
1230     [wsgen] [WrapperGen - method: analize(java.util.List<compbio.data.sequence.FastaSequence>)]
1231     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1232     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize]
1233     [wsgen] [should process method: customAnalize hasWebMethods: false ]
1234     [wsgen] [endpointReferencesInterface: true]
1235     [wsgen] [declaring class has WebSevice: true]
1236     [wsgen] [returning: true]
1237     [wsgen] [WrapperGen - method: customAnalize(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
1238     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1239     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize]
1240     [wsgen] [should process method: presetAnalize hasWebMethods: false ]
1241     [wsgen] [endpointReferencesInterface: true]
1242     [wsgen] [declaring class has WebSevice: true]
1243     [wsgen] [returning: true]
1244     [wsgen] [WrapperGen - method: presetAnalize(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
1245     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1246     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize]
1247     [wsgen] [should process method: getAnnotation hasWebMethods: false ]
1248     [wsgen] [endpointReferencesInterface: true]
1249     [wsgen] [declaring class has WebSevice: true]
1250     [wsgen] [returning: true]
1251     [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)]
1252     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1253     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation]
1254     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
1255     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
1256     [wsgen] [should process method: cancelJob hasWebMethods: false ]
1257     [wsgen] [endpointReferencesInterface: true]
1258     [wsgen] [declaring class has WebSevice: false]
1259     [wsgen] [returning: true]
1260     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
1261     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1262     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
1263     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
1264     [wsgen] [endpointReferencesInterface: true]
1265     [wsgen] [declaring class has WebSevice: false]
1266     [wsgen] [returning: true]
1267     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
1268     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1269     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
1270     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
1271     [wsgen] [endpointReferencesInterface: true]
1272     [wsgen] [declaring class has WebSevice: false]
1273     [wsgen] [returning: true]
1274     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
1275     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1276     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
1277     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
1278     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
1279     [wsgen] [endpointReferencesInterface: true]
1280     [wsgen] [declaring class has WebSevice: false]
1281     [wsgen] [returning: true]
1282     [wsgen] [WrapperGen - method: getRunnerOptions()]
1283     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1284     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
1285     [wsgen] [should process method: getPresets hasWebMethods: false ]
1286     [wsgen] [endpointReferencesInterface: true]
1287     [wsgen] [declaring class has WebSevice: false]
1288     [wsgen] [returning: true]
1289     [wsgen] [WrapperGen - method: getPresets()]
1290     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1291     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
1292     [wsgen] [should process method: getLimit hasWebMethods: false ]
1293     [wsgen] [endpointReferencesInterface: true]
1294     [wsgen] [declaring class has WebSevice: false]
1295     [wsgen] [returning: true]
1296     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
1297     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1298     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
1299     [wsgen] [should process method: getLimits hasWebMethods: false ]
1300     [wsgen] [endpointReferencesInterface: true]
1301     [wsgen] [declaring class has WebSevice: false]
1302     [wsgen] [returning: true]
1303     [wsgen] [WrapperGen - method: getLimits()]
1304     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1305     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
1306     [wsgen] compbio/data/msa/jaxws/Analize.java
1307     [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java
1308     [wsgen] compbio/data/msa/jaxws/CancelJob.java
1309     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
1310     [wsgen] compbio/data/msa/jaxws/CustomAnalize.java
1311     [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java
1312     [wsgen] compbio/data/msa/jaxws/GetAnnotation.java
1313     [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java
1314     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
1315     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
1316     [wsgen] compbio/data/msa/jaxws/GetLimit.java
1317     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
1318     [wsgen] compbio/data/msa/jaxws/GetLimits.java
1319     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
1320     [wsgen] compbio/data/msa/jaxws/GetPresets.java
1321     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
1322     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
1323     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
1324     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
1325     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
1326     [wsgen] compbio/data/msa/jaxws/PresetAnalize.java
1327     [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java
1328     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
1329     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
1330     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
1331     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
1332     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
1333     [wsgen] Note:       ap round: 2
1334
1335 BUILD SUCCESSFUL
1336 Total time: 8 seconds