examples-jbake/templates/jvl_formComplete.ftl

   1 <strong>Using the <a href="jalviewLiteJs.html">JalviewLite API</a> to fill out forms using data from JalviewLite<br/></strong>
   2 Click the Javascript buttons below to interact with the Applet
   3 instance on the page.<br/>
   4 View the source in your browser to see how it has been done. <br/>
   5 <a name="api">View the full <a href="jalviewLiteJs.html">JalviewLite API documentation</a>.</a>
   6 <applet code="jalview.bin.JalviewLite" width="0" height="0"
   7         archive="${content.jvl}" name="Jalview">
   8   <#if content.permissions?exists><param name="permissions" value="${content.permissions}"/></#if>
   9   <param name="file" value="plantfdx.fa"/>
  10   <param name="features" value="plantfdx.features"/>
  11   <param name="wrap" value="true"/>
  12   <param name="showAnnotation" value="false"/>
  13   <param name="windowHeight" value="500"/>
  14   <param name="windowWidth" value="650"/>
  15   <param name="showFullId" value="false"/>
  16   <param name="linkLabel_1" value="Uniprot"/>
  17   <param name="linkUrl_1"
  18          value="http://www.uniprot.org/uniprot/$SEQUENCE_ID$"/>
  19   <param name="linkLabel_2" value="Expasy">
  20   <param name="linkUrl_2"
  21          value="http://us.expasy.org/cgi-bin/niceprot.pl?$SEQUENCE_ID$"/>
  22   <param name="hidefeaturegroups" value="uniprot" />
  23   <param name="showbutton" value="false" />
  24 </applet>
  25 <form name="exampleForm"><br/>
  26   <br/>
  27   <center><strong>Using the Jalview Applet for Input
  28       to an HTML Form</strong></center>
  29   <div align="center"><input type="button"
  30                              onClick="document.forms.exampleForm.exampleTextarea.value=document.applets.Jalview.getAlignment('fasta', 'false')"
  31                              value="Fill Form from Jalview" /> <br/>
  32     <br/>
  33     <textarea name="exampleTextarea" cols="55" rows="9"></textarea></div>
  34 </form>
  35 <center><strong>Make a new View and Get and Set
  36     Group Display List</strong></center>
  37 <form name="groupForm">
  38   <div align="center"><input type="button"
  39                              onClick="document.forms.groupForm.groups.value=document.applets.Jalview.getFeatureGroups()"
  40                              value="Get groups" /> <input type="button"
  41                                                           onClick="document.applets.Jalview.newView()" value="new View" /> <br/>
  42     <textarea name="groups" cols="55" rows="9"></textarea> <br/>
  43     <input type="button"
  44            onClick="document.applets.Jalview.setFeatureGroupState(document.forms.groupForm.groups.value, true)"
  45            value="Display groups" /> <input type="button"
  46                                             onClick="document.applets.Jalview.setFeatureGroupState(document.forms.groupForm.groups.value, false)"
  47                                             value="Hide groups" /></div>
  48 </form>
  49 </div>