src/jalview/ext/treeviewer/TreeBuilderI.java

   1 package jalview.ext.treeviewer;
   2
   3 import jalview.datamodel.SequenceI;
   4
   5 import java.util.Map;
   6
   7 /**
   8  * @author kjvanderheide
   9  *
  10  */
  11 public interface TreeBuilderI
  12 {
  13   public TreeI buildTree();
  14
  15   public TreeI buildTree(TreeNodeI treeRoot);
  16
  17   public String generateTreeName();
  18
  19   public Map<SequenceI, TreeNodeI> getAlignmentBoundNodes();
  20
  21   public Map<TreeNodeI, SequenceI> getNodesBoundAlignment();
  22
  23 }