JAL-3067 Initial preparation.

[jalview.git] / .classpath

diff --git a/.classpath b/.classpath
index c85feaf..8ca06f2 100644 (file)
--- a/.classpath
+++ b/.classpath
@@ -1,8 +1,8 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <classpath>
        <classpathentry kind="src" path="src"/>
+       <classpathentry kind="src" path="src2"/>
        <classpathentry kind="src" path="utils"/>
-       <classpathentry kind="src" path="test"/>
        <classpathentry kind="lib" path="lib/activation.jar"/>
        <classpathentry kind="lib" path="lib/axis.jar" sourcepath="D:/axis-1_2RC2-src/axis-1_2RC2"/>
        <classpathentry kind="lib" path="lib/commons-discovery.jar"/>
@@ -16,27 +16,9 @@
        <classpathentry kind="lib" path="lib/castor-1.1-cycle-xml.jar" sourcepath="C:/Documents and Settings/JimP/workspace-3.3/castor/src/main/java"/>
        <classpathentry kind="lib" path="lib/JGoogleAnalytics_0.3.jar" sourcepath="/JGoogleAnalytics/src/main/java"/>
        <classpathentry kind="lib" path="lib/vamsas-client.jar"/>
-       <classpathentry kind="lib" path="lib/commons-logging-1.1.1.jar"/>
        <classpathentry kind="lib" path="lib/apache-mime4j-0.6.jar" sourcepath="G:/InstallsDir/Sources for Development/apache-mime4j-0.6-src.zip"/>
-       <classpathentry kind="lib" path="lib/httpclient-4.0.3.jar">
-               <attributes>
-                       <attribute name="javadoc_location" value="file:/D:/InstallsDir/Sources for Development/httpconnect/httpcomponents-client-4.0.3/javadoc/"/>
-               </attributes>
-       </classpathentry>
-       <classpathentry kind="lib" path="lib/httpcore-4.0.1.jar">
-               <attributes>
-                       <attribute name="javadoc_location" value="file:/D:/InstallsDir/Sources for Development/httpconnect/httpcomponents-client-4.0.3/javadoc/"/>
-               </attributes>
-       </classpathentry>
-       <classpathentry kind="lib" path="lib/httpmime-4.0.3.jar">
-               <attributes>
-                       <attribute name="javadoc_location" value="file:/D:/InstallsDir/Sources for Development/httpconnect/httpcomponents-client-4.0.3/javadoc/"/>
-               </attributes>
-       </classpathentry>
        <classpathentry kind="lib" path="lib/miglayout-4.0-swing.jar"/>
        <classpathentry kind="lib" path="lib/jswingreader-0.3.jar" sourcepath="/jswingreader"/>
-       <classpathentry kind="lib" path="lib/commons-codec-1.3.jar"/>
-       <classpathentry kind="lib" path="lib/jdas-1.0.4.jar"/>
        <classpathentry kind="lib" path="lib/spring-core-3.0.5.RELEASE.jar"/>
        <classpathentry kind="lib" path="lib/spring-web-3.0.5.RELEASE.jar"/>
        <classpathentry kind="lib" path="lib/jabaws-min-client-2.2.0.jar" sourcepath="/clustengine"/>
@@ -48,6 +30,7 @@
        <classpathentry kind="lib" path="lib/VARNAv3-93.jar"/>
        <classpathentry kind="lib" path="lib/jfreesvg-2.1.jar"/>
        <classpathentry kind="lib" path="lib/quaqua-filechooser-only-8.0.jar"/>
+       <classpathentry kind="lib" path="lib/VAqua4.jar"/>
        <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/plugin"/>
        <classpathentry kind="lib" path="lib/xml-apis.jar"/>
        <classpathentry kind="con" path="org.eclipse.jdt.junit.JUNIT_CONTAINER/4"/>
@@ -61,13 +44,20 @@
        <classpathentry kind="lib" path="lib/jetty-util-9.2.10.v20150310.jar"/>
        <classpathentry kind="lib" path="lib/jetty-http-9.2.10.v20150310.jar"/>
        <classpathentry kind="lib" path="lib/jetty-io-9.2.10.v20150310.jar"/>
-       <classpathentry kind="lib" path="lib/java-json.jar"/>
        <classpathentry kind="lib" path="lib/Jmol-14.6.4_2016.10.26.jar"/>
        <classpathentry kind="con" path="org.testng.TESTNG_CONTAINER"/>
        <classpathentry kind="lib" path="lib/biojava-core-4.1.0.jar"/>
        <classpathentry kind="lib" path="lib/biojava-ontology-4.1.0.jar"/>
-       <classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.8"/>
        <classpathentry kind="lib" path="lib/htsjdk-2.12.0.jar"/>
        <classpathentry kind="lib" path="lib/groovy-all-2.4.12-indy.jar"/>
+       <classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.8"/>
+       <classpathentry kind="lib" path="lib/commons-codec-1.10.jar"/>
+       <classpathentry kind="lib" path="lib/commons-logging-1.2.jar"/>
+       <classpathentry kind="lib" path="lib/httpclient-4.5.6.jar"/>
+       <classpathentry kind="lib" path="lib/httpcore-4.4.10.jar"/>
+       <classpathentry kind="lib" path="lib/httpmime-4.5.6.jar"/>
+       <classpathentry kind="lib" path="lib/json-20180130.jar"/>
+       <classpathentry kind="lib" path="D:/mmwarowny/eclipse_ws/slivka-java-client/target/slivkaclient-0.0.1-SNAPSHOT.jar"/>
+       <classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER"/>
        <classpathentry kind="output" path="classes"/>
 </classpath>