New classes

[jalview.git] / JalviewApplet.jpx

diff --git a/JalviewApplet.jpx b/JalviewApplet.jpx
index 19e5526..0044ab6 100755 (executable)
--- a/JalviewApplet.jpx
+++ b/JalviewApplet.jpx
@@ -54,15 +54,12 @@
   <node name="jalview.jbappletgui" type="Package"/>\r
   <node name="jalview.math" type="Package"/>\r
   <node name="jalview.schemes" type="Package"/>\r
-  <node name="jalview.util" type="Package"/>\r
   <file path="src/jalview/analysis/AAFrequency.java"/>\r
   <file path="src/jalview/io/AlignFile.java"/>\r
   <file path="src/jalview/analysis/AlignmentSorter.java"/>\r
-  <file path="src/jalview/analysis/AlignmentUtil.java"/>\r
   <file path="src/jalview/analysis/AlignSeq.java"/>\r
   <file path="src/jalview/io/BLCFile.java"/>\r
   <file path="src/jalview/io/ClustalFile.java"/>\r
-  <file path="src/jalview/analysis/CompareAlignments.java"/>\r
   <file path="src/jalview/analysis/Conservation.java"/>\r
   <file path="src/jalview/io/FastaFile.java"/>\r
   <file path="src/jalview/io/FileParse.java"/>\r