JAL-3187 initial refactoring towards peptide variant in tooltip

[jalview.git] / build.gradle

diff --git a/build.gradle b/build.gradle
index b07ea37..9fbcd38 100644 (file)
--- a/build.gradle
+++ b/build.gradle
@@ -317,8 +317,8 @@ eclipse {
     }
   }
   
-  synchronizationTasks eclipseClasspath
-  autoBuildTasks eclipseClasspath
+  //synchronizationTasks eclipseClasspath
+  //autoBuildTasks eclipseClasspath
 } 
 
 task cloverInstr() {
@@ -455,7 +455,40 @@ task createBuildProperties(type: WriteProperties) {
   outputs.dir("$classes")
 }
 
+def buildingHTML = "$jalviewDir/$docDir/building.html"
+task deleteBuildingHTML(type: Delete) {
+  delete buildingHTML
+}
+
+task convertBuildingMD(type: Exec) {
+  dependsOn deleteBuildingHTML
+  def buildingMD = "$jalviewDir/$docDir/building.md"
+  def css = "$jalviewDir/$docDir/github.css"
+
+  def pandoc = pandoc_exec
+  def hostname = "hostname".execute().text.trim()
+  if (! file(pandoc).exists() && hostname.equals("jv-bamboo")) {
+    pandoc = System.getProperty("user.home")+"/buildtools/pandoc/bin/pandoc"
+  }
+
+  if (file(pandoc).exists()) {
+    commandLine pandoc, '-s', '-o', buildingHTML, '--metadata', 'pagetitle="Building Jalview from Source"', '--toc', '-H', css, buildingMD
+  } else {
+    commandLine "true"
+  }
+
+  ignoreExitValue true
+
+  inputs.file(buildingMD)
+  inputs.file(css)
+  outputs.file(buildingHTML)
+}
+clean {
+  delete buildingHTML
+}
+
 task syncDocs(type: Sync) {
+  dependsOn convertBuildingMD
   def syncDir = "$classes/$docDir"
   from fileTree("$jalviewDir/$docDir")
   into syncDir
@@ -642,6 +675,7 @@ task cleanDist {
 }
 
 shadowJar {
+  group = "distribution"
   dependsOn makeDist
   from ("$jalviewDir/$libDistDir") {
     include("*.jar")