Merge branch 'releases/Release_2_11_3_Branch'

[jalview.git] / examples / groovy / featuresCounter.groovy

diff --git a/examples/groovy/featuresCounter.groovy b/examples/groovy/featuresCounter.groovy
index ccbb830..dc4c97c 100644 (file)
--- a/examples/groovy/featuresCounter.groovy
+++ b/examples/groovy/featuresCounter.groovy
@@ -1,3 +1,24 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
+
 import jalview.workers.AlignmentAnnotationFactory;
 import jalview.workers.FeatureSetCounterI;
 
@@ -10,7 +31,11 @@ import jalview.workers.FeatureSetCounterI;
  *
  * The script only needs to be run once - it will be registered by Jalview
  * and recalculated automatically when the alignment changes.
+ * 
+ * Note: The feature api provided by 2.10.2 is not compatible with scripts
+ * that worked with earlier Jalview versions. Apologies for the inconvenience.
  */
+ 
 def annotator = 
     [
      getNames: { ['Phosphorylation', 'Turn'] as String[] },