+++ /dev/null
-/*
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
- *
- * This file is part of Jalview.
- *
- * Jalview is free software: you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3
- * of the License, or (at your option) any later version.
- *
- * Jalview is distributed in the hope that it will be useful, but
- * WITHOUT ANY WARRANTY; without even the implied warranty
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
- * PURPOSE. See the GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
- * The Jalview Authors are detailed in the 'AUTHORS' file.
- */
-// do something groovy in jalview
-println "Hello World.\n"
-println "First sequence is " + currentAlFrame.viewport.alignment.getSequenceAt(0).getDisplayId(true)
-
-def alf = Jalview.getAlignFrames()
-for (ala in alf)
-{
- // ala is an jalview.gui.AlignFrame object
- println ala.getTitle()
- // get the parent jalview.datamodel.Alignment from the alignment viewport
- def alignment = ala.viewport.alignment
- // get the first sequence from the jalview.datamodel.Alignment object
- def seq = alignment.getSequenceAt(0)
-}
-Jalview.quit()